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Chemo informatics scope and applications

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Chemo informatics scope and applications

  1. 1. Chemo- informatics scope and applications Shyam ingle
  2. 2. Scope of chemo-informatics  In Drug designing  In Clinical research  In Synthetic chemistry  In Pharma-industries  In Pharmacogenomics  In systems biology  In nanotechnology
  3. 3. Use of chemo-informatics for Drug designing  Provide virtual structures libraries  Provide Graphical interphase for drug designing  Docking  Drug discovery  Drug development  QSAR studies
  4. 4. Use of chemo-informatics in Clinical research  Interaction studies  Provide molecular visualization  Provide predicted score  Structural analysis
  5. 5. Use of chemo-informatics in Synthetic chemistry  chemical synthesis  designing new molecules  Similarity searching
  6. 6. Use of chemo-informatics in Pharma-industries  Activity prediction  Geno-toxicity prediction  Mutagenicity prediction  Carcinogenicity prediction  Interaction sutidies
  7. 7. Use of chemo-informatics in Pharmacogenomics  Drug genome interaction studies  Genome level drug developments  Pharmacophore predictions(also used in drug designing)
  8. 8. Use of chemo-informatics in systems biology  Target designing  Interaction studies  Interaction prediction of interaction values
  9. 9. Use of chemo-informatics in nanotechnology  Nanoparticle libraries generation  Nanoparticle studies  Designing, prediction, etc.
  10. 10. Applications  Storage and retrieval  File formats  Virtual libraries  Virtual screening  Quantitative structure-activity relationship (QSAR)
  11. 11. Storage and retrieval  The primary application of chemo- informatics is in the storage, indexing and search of information relating to compounds. include:  Unstructured data  Digital libraries  Information retrieval  Information extraction
  12. 12. File formats  The in silico representation of chemical structures uses specialized formats such as the:  SDF:2D & 3D  Mol:2D  Mol2:3D  Xml
  13. 13. Virtual libraries  Chemical data can pertain to real or virtual molecules  Virtual libraries of classes of compounds: drugs, natural products, diversity-oriented synthetic products
  14. 14. Virtual screening  virtual screening involves computationally screening in silico libraries of compounds  virtual screening on the basis of: biological activity against a given target, Docking, similarity, etc.
  15. 15. Quantitative structure-activity relationship (QSAR)  This is the calculation of quantitative structure-activity relationship and quantitative structure property relationship values, used to predict the activity of compounds from their structures  Use descriptors
  16. 16. Thanks!

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