âVVIP Hyderabad Call Girls Chintalkuntađ7001035870đRiya Kappor Top Call Girl ...
Â
Talk about microBEnet (http://microbe.net)
1. The Microbiology of the
Built Environment Network
http://microBE.net
Jonathan A. Eisen
UC Davis
@phylogenomics
Saturday, May 25, 13
2. microBEnet: Who?
⢠UC Davis:
⢠Jonathan Eisen
⢠David Coil
⢠Mary Jo Seminoff
⢠Holly Bik
⢠Tom Olson
⢠Russell Neches
⢠Jenna Lang
⢠many undergrads
⢠Building Ecology Research Group:
⢠Hal Levin
⢠Other collaborators
⢠Jessica Green
⢠Jack Gilbert, Dan Smith, others at Argonne and U. Chicago
⢠Darlene Cavalier, Wendy Brown, Mark Severance, Summer
Williams
Saturday, May 25, 13
3. microBEnet Targets
⢠Those funded by Sloan Program
⢠Anyone in related fields w/ current or
potential interest in microBE
⢠Stakeholders
Saturday, May 25, 13
6. Future (ideas from 2012 Mtg)
⢠Host resources that others have that
could be helpful to share
⢠Guest blog posts
⢠Latest papers with background
⢠More targeted workshops to develop
interactions
⢠Undergrad education
⢠K-12 outreach
⢠Public outreach
Saturday, May 25, 13
7. Future (ideas from 2012 Mtg)
⢠Host resources that others have that
could be helpful to share
⢠Guest blog posts
⢠Latest papers with background
⢠More targeted workshops to develop
interactions
⢠Undergrad education
⢠K-12 outreach
⢠Public outreach
Saturday, May 25, 13
9. Why Undergrad Projects
⢠Undergraduate research projects in the
built environment
⢠A form of outreach (blogging, etc)
⢠Develop teaching materials related to the
microbiology of the built environment
⢠Keep our lab in the loop
⢠A touch of useful data
Saturday, May 25, 13
10. Reference Genomes
⢠7 students
⢠Cultured organisms
isolated from a variety of
built environments
⢠Identify, sequence,
assemble, annotate,
publish a genome each
⢠5 papers published so far in
Genome Announcements
⢠All Data released
⢠Student blog
â˘Brachybacterium muris
(Jonathon Lo):
â˘Microbacterium sp (Zach
Bendiks):
â˘Curtobacterium flaccumfaciens
(Jennifer Flanagan)
â˘Dietzia sp (Amanda Diep):
â˘Kocuria rosea (Jessica Doctor):
â˘Leucobacter sp (Dakota Bevans,
Hannah Holland-Moritz):
Saturday, May 25, 13
12. Aquarium Biogeography
⢠6 students
⢠16S surveys and
metagenomics in aquariums
⢠Looking at biogeography
and succession
⢠Using MBE tools
⢠Paper in progress
⢠Coordinated by Jenna Lang,
David Coil, Matt Haggerty
Undergraduates:
â˘Sabreen Aulakh
â˘Alex Alexiev
â˘Akshay Sethi
â˘Andrew Shaver
â˘Jennifer Flanagan
â˘Lakshmi Bharadwaj
High School:
â˘Kevin Yang
â˘In collaboration with Kenneth
Kubo at American River
College
Saturday, May 25, 13
14. Future (ideas from 2012 Mtg)
⢠Host resources that others have that
could be helpful to share
⢠Guest blog posts
⢠Latest papers with background
⢠More targeted workshops to develop
interactions
⢠Undergrad education
⢠K-12 outreach
⢠Public outreach
Saturday, May 25, 13
16. Project MERCCURI
⢠Sample International Space Station in
collaboration with Nanoracks
⢠Outreach by sampling at various public
events
⢠Collaboration with Science
Cheerleaders and Science for Citizens
⢠Darlene Cavalier, Summer Williams,
Mark Severance
⢠UCD: David Coil, Jenna Lang, Russell
Neches, et al.
Saturday, May 25, 13
19. Future (ideas from 2012 Mtg)
⢠Host resources that others have that
could be helpful to share
⢠Guest blog posts
⢠Latest papers with background
⢠More targeted workshops to develop
interactions
⢠Undergrad education
⢠K-12 outreach
⢠Public outreach
Saturday, May 25, 13
20. Future (ideas from 2012 Mtg)
⢠Host resources that others have that
could be helpful to share
⢠Guest blog posts
⢠Latest papers with background
⢠More targeted workshops to develop
interactions
⢠Undergrad education
⢠K-12 outreach
⢠Public outreach
Saturday, May 25, 13
22. Centralize Information
⢠Pull in blog posts and news from
other sources
⢠Updates to social media
⢠New papers
⢠Twitter hashtag (#microbenet)
Saturday, May 25, 13
23. Monthly Newsletter
⢠Summary of
blog posts
⢠âResource of
the Monthâ
⢠âPeople Behind
the Scienceâ
video seriesâŚ
âProject of the
Monthâ
⢠Recent and
upcoming
meetings
Saturday, May 25, 13
25. Other Information-Related
⢠Curate and analyze reference
collections
⢠Simple guides
⢠Sloan Program
⢠Wikipedia curation
Saturday, May 25, 13
27. Sharing & Publicizing Sloan Work
⢠Guest blog posts
⢠microBEnet posts
⢠Mendeley
⢠Video interviews
⢠Press
⢠Data sharing
⢠Pre and post publication
⢠Job postings
⢠Networking
Saturday, May 25, 13
29. Gaps
⢠Citizen microbiology
⢠QIIME/VAMPS use
⢠Software Carpentry
⢠Culture collections
⢠Genomes of isolates
⢠How to share
⢠Methods sharing
⢠Other related social media
⢠Alt metrics
⢠Simulated community samples
Saturday, May 25, 13
30. Thanks
⢠Alfred P. Sloan Foundation
⢠microBEnet people: Hal Levin, David Coil, Mary Jo
Seminoff, Holly Bik, Jenna Lang, Russell Neches, Tom
Olson, et al
⢠All the undergrads in the lab
⢠Science Cheerleaders and Science for Citizens esp.
Darlene Cavalier, Wendy Brown, Mark Severance,
Summer Williams
⢠Collaborators: Jessica Green, Jack Gilbert, Dan
Smith, et al.
⢠Sloan Funded researchers / labs
⢠Others working in microBE topics
⢠Advice: Rob Dunn, Holly Menninger, Rob Knight,
manyothers
Saturday, May 25, 13