2. 1969, Robert H. Whittaker founded the five-kingdom
5 main kingdoms:
Protista (mostly single celled)
Fungi (unicellular or multicellular, absorptive
Plantae(metaphytakingdom,multicellualr,photosynthetic)
Animalia(metazoa kingdom,multicellular,digestive)
Monerans(unicellualr)
3. 3 Domains
Eubacteria
true bacteria, peptidoglycan
Archaea
Prokaryotic, odd bacteria ,No peptidoglycan,
that live in extreme environments, high salt,
heat, methanogens (extremophiles)
Eukarya
have a nucleus & organelles (animals,
plants,fungi,protozoa,etc…..)
1978, Carl R. Woes
Differences in RNA, membrane lipid structure, sensitivity
to antibiotics
4.
5. Bacteria
Unicellular free living organisms without chlorophyll
Having both DNA and RNA
They are capable of performing all essential processes of life, e.g.
growth, metabolism and reproduction
6. Scientific nomenclature
Binomial nomenclature.
Genus name and specific epithet (species)
Both names are printed underlined or italicized
The genus name is always a noun and capitalized
The species name is usually an adjective and lowercase
e.g. Staphylococcus aureus, Bacillus anthracis, Escherichia coli
OR S. aureus, B. anthracis, E. coli
7. micron(μm)
Varies with kinds age and external environment.
o Cocci: sphere, 1μm , e. g: Staphylococcus sp.( bunches of grapes),
Streptococcus sp.(chains), diplococci (forming pairs), tetrads and sarcina
o Bacilli: rods , 0. 2-0. 5 μm in width 2-10 μm in length, Brucella(coccobacilli)
e.g: Bacillus sp., Corynebacteria (Chinese letter arrangement), Vibrio (comma
shaped), Spirochaetes (spiral), Actinomycetes (branching filamentous ),
Size and shape of bacteria
9. L form bacteria: Bacteria with defective cell wall either spontaneously
or as a result of drug, e.g. in presence of penicillin . Morphology is not
stable
e.g:Mycoplasma sp.(appear round with interlacing filaments)
Pleomorphism: Some species of bacteria show great variation in shape
and size of undivided cell.
e.G :Haemophilus sp.
Involution: Certain species show swollen aberrant forms in aging
cultures especially in presence of high salt concentration.
It may be due to defective cell wall synthesis. e.g : plague Bacillus
Size and shape of bacteria:
11. PROTOPLAST and SPHEROPLAST formed due the action of
lysozymes on bacterial cell walls
PROTOPLAST : gram positive bacteria lost part of the cell wall by
the action of lysozymes but not completely destroyed and remain
surrounded by cytoplasmic membrane
SPHEROPLAST : gram negative bacteria lost part of the cell wall
by the lysozymes but maintain part of its outer membrane, cell wall
and cellular content.
Both are spherical
Associated with chronicity like in pyelonephritis.
13. Gram-negative Cell Wall
Lipoprotein layer which connects outer
membrane to peptidoglycan.
Phospholipid bilayer containing specific
proteins that form porins
Other proteins are target sites for phages,
antibiotics and bacteriocins.
Lipopolysaccharide consists of lipid A and
polysaccharide
Polysaccharide represents a major surface
antigen, the O antigen.
Lipopolysaccharide is the endotoxin of Gram-
negative bacteria
14. The space in between the inner and outer membranes
Contain proteins (such as enzymes and binding proteins for specific
substrates) and oligosaccharides (which play an important role in
osmoregulation of the cells).
Gram-negative Cell Wall
Periplasmic space
15. Gram-positive Cell Wall
Teichoic acids constitute major surface
antigens of Gram-positive bacteria.
Other components of Gram-positive cell
wall contain antigens such as the
polysaccharide and protein.
16. CELL WALL
Freely permeable to solute molecules
Protects the internal structure
Composed of mucopeptide (muerin)
Confers rigidity and ductility (mucopeptide).
Role in division of bacteria.
Offers resistance to harmful effect of environment.
Contains receptor sites for phages and colicin.
Provides attachment to complement.
17. GLYCOCALYX
Substances containing polysaccharides lying external to cell wall
Slime layer and capsule
Slime producing bacteria show mucoid growth on agar, e.g :
Klebsiella pneumoniae
18. Capsule
Gelatinous secretion of bacteria organized as a thick coat around cell wall
Capsulated bacteria are usually non motile
Microcapsule, thinner than true capsules e.g. Meningococci, Streptococcus
pyogenes and Haemophilus influenzae
It may be composed of complex polysaccharide (pneumococci and klebsiella) or
polypeptide (Bacillus anthracis) or hyaluronic acid (Streptococcus pyogenes
Protection against lytic enzymes.
Virulent factor by inhibiting phagocytosis.
Hapten elicit an immune response
19. Cytoplasmic membrane
Consists of phospholipid with small amount of protein.
Sterol is absent except in mycoplasma
Controls inflow and outflow of metabolites
Its permease selectively controls the passage of nutrients.
Contains respiratory enzymes and pigments that manufacture the
substance of cell wall and extracellular structure.
Provides little mechanical strength to bacterial cell.
It helps DNA replication.
20. CYTOPLASM
It does not exhibit internal mobility
Lacks endoplasmic reticulum or mitochondria
Contains ribosomes, mesosomes, inclusions and vacuoles.
21. Ribosomes
Sedimentation coefficient is 70 svedberg units(70S)
Sites of protein synthesis
Mesosomes
Invaginations of plasma membrane in the cytoplasm
Prominent in Gram-positive bacteria
Their function is not well known:
Coordinate nuclear and cytoplasmic division during binary fission????!!!).
Responsible for compartmenting DNA at sporulation????!!!
22. Intracytoplasmic Inclusions
Cytoplasmic granules
Glycogen (enteric bacillium)
polybetis hydroxybutyrate (bacillus and pseudomonas)
Babes Ernst (corynebacterium, Yersinia pestis).
Reserve of energy and phosphate for cell metabolism.
Carbon sources during protein and nucleic acid synthesis
Convert excess H2S from environment into intracellular granules of element
sulfur.
Storage of lipids
23. NUCLEUS
Long filament of DNA inside the cytoplasm
Not surrounded by nuclear membrane
It does not have nucleolus.
Bacterial chromosome is haploid and replicates by simple fission
Plasmid or episomes
Extranuclear genetic material
Transmitted to daughter cells during :
binary fission, conjugation and by bacterial phages
They may confer certain properties like toxigenicity ,virulence and drug resistance
27. Fimbriae:
Hair like appendages, many
Involved in adherence and colonization
Biofilm formation
Pili:
Longer than fimbriae ,one or two/cell
For twitching motility : contact to surfaces or cells by pilin subunits e.g:Pseudomonas
aeruginosa
Gliding motility : movement in environment with low water content such as biofilms and
soil,e.g :Mycobacteria
Conjugation or Sex pili: transfer of genetic material like drug resistance
28. ENDOSPORES
Highly resistant dormant state of bacteria found in bacillus,
clostridium, sporosarcina (Gram-positive coccus) and Coxiella
burnetii (sporelike structures)
Not destroyed by ordinary methods of boiling for several
hours
Destroyed at autoclaving: ( 15 lb pressure per square inch at
121°C for 20 minutes)
They make survival of certain organisms possible under
unfavorable condition like dry state
Used as sterilization control mainly:
Bacillus stearothermophilus is killed at 121°C in 15 to 30
minutes.
Bacillus subtilis may be destroyed at105°C in 5 minutes.
29. BIOFILM
Thin slimy layer encasing single or diverse group of bacteria species adheres to a surface
Irreversibly attached to biological or non biological surface(human tooth, mucous
membranes,etc…).
Microorganisms are more resistant to traditional antibiotics inside it.
Protected from host defense mechanisms
Associated with chronicity and persistence of diseases
Nosocomial infections connected with use of central venous catheters, urinary catheters,
prosthetic heart valves, intraocular lenses and orthopedic devices are associated with
biofilms .
Staphylococcus epidermides; Staphylococcus aureus, Pseudomonas aeruginosa
32. Study the Morphology of Bacteria
Optical Methods: motility, size, shape and arrangement of bacteria.
Light microscopy
Phase contrast microscopy
Dark ground microscopy
Fluorescence microscope
Electron microscope
Polarization microscope
Autoradiography
33. Gram’s Stain
Acidic Acridine Orange Stain
Albert Stain
Ziehl-Neelsen Stain
STAINING OF BACTERIA
34. Gram in 1884
Study morphologic appearance of bacteria
Aid in diagnosis
Gram-positive organisms and Gram-negative organisms.
Gram-positive organisms are not decolorized and retain color of basic stain, e.g.
crystal violet
Gram-negative organisms lose cystal violet stainwhen treated with decolorizing
agent and take up the counter stain, e.g. dilute carbol fuchsin or safranin
Gram’s Stain
36. Is also called acid-fast stain.
Some organisms retain carbol fuchsin even when decolorized with acid due
to mycolic acid present in their cell walls.
They are called acid-fast organisms.
Ziehl-Neelsen Stain
37. Classification – ordering
*Kingdom
Phylum
Class
Order
Family
*Genus ( 1st name)
*Species ( 2nd name identifier)
Classification and Identification of Bacteria
38. Classification of Bacteria
Morphology – size and shape arrangement , culture characteristics , spore
Staining properties: Gram stain, Acid fast stain.
Resistance: heat, antibiotics, disinfectants
Metabolism: oxygen, need of carbon dioxide, pigment production, hemolysis
Motility
Bacteriophage typing
Pathogenicity using laboratory animal models