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S 144 (VIROLOGY)
                           Lecture 1: Introduction




                                                     Parungao-Balolong 2011-2012
Friday, June 17, 2011
Skills, Values and Outputs

                        Listening, Writing & Communication Skills
                        Openness and Appreciation of Old &
                        Advancing Ideas
                        Objectivity & Critical Thinking


                                                     Parungao-Balolong 2011-2012
Friday, June 17, 2011
Lecture Outline

                        Introduction to Virology
                        History
                        Reasons for the Study of Virology
                        Origin & Evolution of Viruses


                                                    Parungao-Balolong 2011-2012
Friday, June 17, 2011
Introduction to Virology
                        VIROLOGY

                          scientific study of viruses and the disease they cause

                        VIRUSES

                          an infective agent typically consists of nucleic acid in
                          a protein coat

                          too small to be seen by light microscopy

                          multiply within living cells of host (obligate parasite)

                          filterable
                                                             Parungao-Balolong 2011-2012
Friday, June 17, 2011
Introduction to Virology




 Jane Flint Principles of Virology, 2004




                                            Parungao-Balolong 2011-2012
Friday, June 17, 2011
Introduction to Virology
                        Viruses challenge the way we define LIFE:

                           they do not respire

                           they do not display irritability

                           they do not move

                           they do not “grow”

                           WHAT THEY DO: they reproduce and adapt to new
                           hosts

                                                              Parungao-Balolong 2011-2012
Friday, June 17, 2011
Strategies for Survival

                        Genomes are packaged inside a particle (transmission)

                        Genome contains all information needed for infection
                        cycle (attachment to release)

                        Establishment in a host population




                                                             Parungao-Balolong 2011-2012
Friday, June 17, 2011
History of Virology
                        Dmitri Iosifovich Ivanowsky
                        (1892)
                        Martinus Beijerink (1898)
                        Filterable agent: Tobacco
                        Mosaic Virus


                                                      Parungao-Balolong 2011-2012
Friday, June 17, 2011
History of Virology
                        Freidrich Loeffler & Paul
                        Frosch (1898)
                        Foot & Mouth Disease Virus




                                                     Parungao-Balolong 2011-2012
Friday, June 17, 2011
History of Virology
                        Walter Reed (1899)
                        Yellow fever: transmission
                        by insect vectors




                                                     Parungao-Balolong 2011-2012
Friday, June 17, 2011
History of Virology
                        VIRUSES AND
                        ONCOGENESIS
                        Ellerman and Bang
                        (1908)
                           Chicken leukemia
                        Peyton Rous (1911)
                           Rous Sarcoma
                           virus              Parungao-Balolong 2011-2012
Friday, June 17, 2011
History of Virology
                        Bacteriophages Era
                        Frederick Twort (1915)
                           discovery of phages
                        Felix D’ Herelle (1917)
                           role in immunity


                                                  Parungao-Balolong 2011-2012
Friday, June 17, 2011
History of Virology
                        Wendell Stanley (1935): crystallization of TMV
                        Delbruck (1940s): modern molecular biology and virology
                        Lwoff (1949): discovery of lysogeny
                        Enders et al., (1949): poliovirus and tissue culture/plaque
                        assays
                        1980s: Immunology and PCR technology was introduced as
                        well as gene therapy and bioterrorism
                                                                Parungao-Balolong 2011-2012
Friday, June 17, 2011
Why Study Viruses?
                        Some Viruses Cause Disease

                                                                 Rabies

   Common Cold




                                             Smallpox
            HIV
                                                        Parungao-Balolong 2011-2012
Friday, June 17, 2011
Why Study Viruses?
                        Some Viruses Cause Disease




      Pepper Mottle Virus          Cauliflower Mosaic Virus             Rice Tungro Virus




                                                             Papaya Ringspot Virus



            Tobacco Mosaic Virus                                               Parungao-Balolong 2011-2012
Friday, June 17, 2011
Why Study Viruses?
                        Some Viruses Cause Disease




    Foot & Mouth Disease           Classical Swine Fever           Porcine Reproductive & Respiratory Syndrome
                                                                                      (PRRS)


                                                           Ebola



                Avian Flu                                                      Parungao-Balolong 2011-2012
Friday, June 17, 2011
Why Study Viruses?
                        Some Viruses Cause Disease




                          AH1N1

                                                     Parungao-Balolong 2011-2012
Friday, June 17, 2011
Why Study Viruses?
                        Some Viruses are Useful
                           Phage Typing of Bacteria
                           e.g. Salmonella spp.
                           classified into strains on the
                           basis of the spectrum of
                           phages to which they are
                           susceptible
                           advantage: Epidemiology
                                                           Parungao-Balolong 2011-2012
Friday, June 17, 2011
Why Study Viruses?
                        Some Viruses are Useful
                           Sources of Enzymes
                              RNA polymerase (T7 phage)
                           Genetic Pesticides
                              gene from baculovirus
                              against worms
                                                          Parungao-Balolong 2011-2012
Friday, June 17, 2011
Why Study Viruses?
                        Some Viruses are Useful

                            Anti-Bacterial Agents

                                 Extrasomatic SARS virus
                                 (e.g. NORWEX)

                            Anti-Cancer Agents

                                 Herpes Simplex Virus

                                 Vaccinia Virus

                                 Destroy tumor cells not normal
                                 cells                            Parungao-Balolong 2011-2012
Friday, June 17, 2011
Why Study Viruses?
                        Some Viruses are Useful
                           Gene Vector for Protein Production
                               baculovirus, adenovirus
                               vaccine component
                           Gene Vector for Treatment of Genetic
                           Diseases
                               retrovirus
                               immunodeficient cases               Parungao-Balolong 2011-2012
Friday, June 17, 2011
Why Study Viruses?
                        Virus Studies Have Contributed to Knowledge

                             Hershey and Chase experiment (T2 phage)




                                                                       Parungao-Balolong 2011-2012
Friday, June 17, 2011
Why Study Viruses?
                        Virus Studies Have Contributed to Knowledge

                             Characterization of enhancers (genes of Simian SV 40)

                             Characterization of transcription factors and localization of protein signal (genes of Simian
                             SV 40)




                                                                                       Parungao-Balolong 2011-2012
Friday, June 17, 2011
Why Study Viruses?
                        Virus Studies Have Contributed to Knowledge
                           Discovery of introns (adenovirus)
                           Role of cap structure at 5’ end of eukaryotic mRNA (vaccinia
                           and reovirus)
                           discovery of internal ribosomal entry site (RNA of poliovirus)
                           discovery of RNA pseudoknot (turnip yellow mosaic virus)

                                                                    Parungao-Balolong 2011-2012
Friday, June 17, 2011
Nature of Viruses
                        Viruses are Small Particles




                                                      Parungao-Balolong 2011-2012
Friday, June 17, 2011
Nature of Viruses
                        Viruses Have Genes       virus code efficiently
                           virus use host cell   multifunctional
                           proteins




                                                 Parungao-Balolong 2011-2012
Friday, June 17, 2011
Nature of Viruses
                        Viruses are Parasites




                                                Parungao-Balolong 2011-2012
Friday, June 17, 2011
Origin & Evolution of Viruses
                        Origin & Evolution of Viruses




                                                        Parungao-Balolong 2011-2012
Friday, June 17, 2011
Origin & Evolution of Viruses
                        Origin & Evolution of Viruses




                                                        Parungao-Balolong 2011-2012
Friday, June 17, 2011

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Virology lecture 1 introduction

  • 1. S 144 (VIROLOGY) Lecture 1: Introduction Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 2. Skills, Values and Outputs Listening, Writing & Communication Skills Openness and Appreciation of Old & Advancing Ideas Objectivity & Critical Thinking Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 3. Lecture Outline Introduction to Virology History Reasons for the Study of Virology Origin & Evolution of Viruses Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 4. Introduction to Virology VIROLOGY scientific study of viruses and the disease they cause VIRUSES an infective agent typically consists of nucleic acid in a protein coat too small to be seen by light microscopy multiply within living cells of host (obligate parasite) filterable Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 5. Introduction to Virology Jane Flint Principles of Virology, 2004 Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 6. Introduction to Virology Viruses challenge the way we define LIFE: they do not respire they do not display irritability they do not move they do not “grow” WHAT THEY DO: they reproduce and adapt to new hosts Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 7. Strategies for Survival Genomes are packaged inside a particle (transmission) Genome contains all information needed for infection cycle (attachment to release) Establishment in a host population Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 8. History of Virology Dmitri Iosifovich Ivanowsky (1892) Martinus Beijerink (1898) Filterable agent: Tobacco Mosaic Virus Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 9. History of Virology Freidrich Loeffler & Paul Frosch (1898) Foot & Mouth Disease Virus Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 10. History of Virology Walter Reed (1899) Yellow fever: transmission by insect vectors Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 11. History of Virology VIRUSES AND ONCOGENESIS Ellerman and Bang (1908) Chicken leukemia Peyton Rous (1911) Rous Sarcoma virus Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 12. History of Virology Bacteriophages Era Frederick Twort (1915) discovery of phages Felix D’ Herelle (1917) role in immunity Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 13. History of Virology Wendell Stanley (1935): crystallization of TMV Delbruck (1940s): modern molecular biology and virology Lwoff (1949): discovery of lysogeny Enders et al., (1949): poliovirus and tissue culture/plaque assays 1980s: Immunology and PCR technology was introduced as well as gene therapy and bioterrorism Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 14. Why Study Viruses? Some Viruses Cause Disease Rabies Common Cold Smallpox HIV Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 15. Why Study Viruses? Some Viruses Cause Disease Pepper Mottle Virus Cauliflower Mosaic Virus Rice Tungro Virus Papaya Ringspot Virus Tobacco Mosaic Virus Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 16. Why Study Viruses? Some Viruses Cause Disease Foot & Mouth Disease Classical Swine Fever Porcine Reproductive & Respiratory Syndrome (PRRS) Ebola Avian Flu Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 17. Why Study Viruses? Some Viruses Cause Disease AH1N1 Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 18. Why Study Viruses? Some Viruses are Useful Phage Typing of Bacteria e.g. Salmonella spp. classified into strains on the basis of the spectrum of phages to which they are susceptible advantage: Epidemiology Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 19. Why Study Viruses? Some Viruses are Useful Sources of Enzymes RNA polymerase (T7 phage) Genetic Pesticides gene from baculovirus against worms Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 20. Why Study Viruses? Some Viruses are Useful Anti-Bacterial Agents Extrasomatic SARS virus (e.g. NORWEX) Anti-Cancer Agents Herpes Simplex Virus Vaccinia Virus Destroy tumor cells not normal cells Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 21. Why Study Viruses? Some Viruses are Useful Gene Vector for Protein Production baculovirus, adenovirus vaccine component Gene Vector for Treatment of Genetic Diseases retrovirus immunodeficient cases Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 22. Why Study Viruses? Virus Studies Have Contributed to Knowledge Hershey and Chase experiment (T2 phage) Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 23. Why Study Viruses? Virus Studies Have Contributed to Knowledge Characterization of enhancers (genes of Simian SV 40) Characterization of transcription factors and localization of protein signal (genes of Simian SV 40) Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 24. Why Study Viruses? Virus Studies Have Contributed to Knowledge Discovery of introns (adenovirus) Role of cap structure at 5’ end of eukaryotic mRNA (vaccinia and reovirus) discovery of internal ribosomal entry site (RNA of poliovirus) discovery of RNA pseudoknot (turnip yellow mosaic virus) Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 25. Nature of Viruses Viruses are Small Particles Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 26. Nature of Viruses Viruses Have Genes virus code efficiently virus use host cell multifunctional proteins Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 27. Nature of Viruses Viruses are Parasites Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 28. Origin & Evolution of Viruses Origin & Evolution of Viruses Parungao-Balolong 2011-2012 Friday, June 17, 2011
  • 29. Origin & Evolution of Viruses Origin & Evolution of Viruses Parungao-Balolong 2011-2012 Friday, June 17, 2011