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Text mining for protein and small molecule relations

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Lars Juhl Jensen
Lars Juhl Jensen

BCB-Seminar, Charite, Berlin, Germany, Januar 19, 2006

BusinessTechnology
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Text mining for protein and small molecule relations Lars Juhl Jensen EMBL
Why?
Overview ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Entity recognition ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Entity identification ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Example ,[object Object],[object Object],[object Object]
Identification of small molecules ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Co-occurrence ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Example ,[object Object],[object Object],[object Object],[object Object]
NLP ,[object Object],[object Object],[object Object],[object Object]
Example ,[object Object],[object Object],[object Object],[object Object]
[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
 
Extraction of relations between protein and small molecules ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Text mining ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
 
Correlations ,[object Object],[object Object],[object Object],[object Object],[object Object]
Temporal trends
Buzzwords
Acknowledgments ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],[object Object]
Thank you!

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Text mining for protein and small molecule relations