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Primer design
1.
1. PCR primer
design • Local software Primer premier5, Oligo 6.1 • Web-based design Primer3 (Whitehead Institute/MIT Center for Genome Research)
2.
Primer premier5
3.
4.
5.
6.
7.
8.
9.
10.
11.
Principles for primer
design • Base composition • Length • Repeated and self-complementary seq. • Cross dimer • Tm • 3’ Termini • Priming sites (From Molecular cloning 3, 8.14)
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