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Supporting Open Science
with Open Pedagogy
Karen Cangialosi
Susan Whittemore
Dept of Biology
Keene State College
Keene, NH USA
Open Pedagogy
• Learners contribute to, not just
consume knowledge
• Community and collaboration
• Connection to the wider public
• Student Agency, Learner-driven
• Critical approach to the use of tools
and technology
‘Floor at domains17’ by Karen Cangialosi [CC BY 4.0]
Modified from content by Robin DeRosa
OPEN PEDAGOGY
is about
Access
Learning
Structure
Design
Knowledge
Knowledge
Creation
Knowledge
Sharing
Community
Participation
Open Educational Resources by Ron Mader [CC BY 2.0]
The Open License and the 5 R’s
• Reuse
• Revise
• Remix
• Redistribute
• Retain
The Many Flavors of OER
• “Traditional” OER as textbook
(e.g. OpenStax, pressbooks)
• Ancillary materials: test banks,
study guides, lesson plans, etc
• Curated links on websites
• Open Google Docs
• Open Access published articles
• Open Datasets
• Open Lab notebooks and Methods
repositories
• Open Videos
• Open Lab Simulations
• Open Source software/tools
• and more…
Popsicles by Colored Pencil Magazine [CC BY 2.0]
By G.emmerich [CC BY-SA 3.0]
• Transparency in experimental methodology,
observation, and collection of data
• Public availability and reusability of scientific
data
• Public accessibility and transparency of
scientific communication
• Using web-based tools to facilitate scientific
collaboration
From What, exactly, is Open Science?
Posted on July 28, 2009 by Dan Gezelter
Open Science
• Open Science
• Open Data
• Citizen Science
• Science Communication
• Open Access Publication
Open Pedagogy
The Pedagogy of Open Science
Open Pedagogy in Science
By G.emmerich [CC BY-SA 3.0]
= teaching students the value and
practices of opening up scientific work
= using Open Pedagogy practices in
STEM courses
The Pedagogy of Open Science
Open Science
Notebook Network
Transparency in experimental methodology, observation, and collection of data
http://onsnetwork.org/
Open Protocols
Transparency in experimental methodology, observation, and collection of data
https://www.protocols.io/
KSC Intro biology students create
wiki pages to use as their open
lab notebook
Transparency in experimental methodology, observation, and collection of data
Student shares methods and data from
her independent research project
Transparency in experimental methodology, observation, and collection of data
Public availability and reusability of scientific data
or Open Data as OER
We like this definition of Open Data
(shared by Javiera Atenas and Leo
Havemann)
“Open Data is an umbrella term
describing openly-licensed,
interoperable, and reusable datasets
which have been created and made
available to the public...”
https://data.world/datasets/biology
Public availability and reusability of scientific data
or Open Data as OER
CEDDIElick to add text
Public availability and reusability of scientific data
or Open Data as OER
Open data repositories used in KSC Bioinformatics Course
Can pose hypotheses and then test them with
this health-related open data repository
Faculty-Student Co-authored and Openly
Licensed Published Research Article
CC BY NC ND
Public accessibility and transparency of scientific communication
Web annotation:
Community &
Collaboration
Public accessibility and transparency of scientific communication
Open Access Scholarly Articles as OER
Public Accessibility: Students write about local contamination sites and potential
consequences to humans and wildlife as public service
#SciComm
Audience Beyond the Professor
Connecting to the Public and other Scientists
Non-disposable Assignments
Science Communication
Twitter
Research Gate
Linked-InUsing web-based tools to facilitate scientific collaboration
Citizen
Science and
Community
Connections
Citizen Science and
Global Connections
Open Pedagogy
Classroom
Open Science
Research Lab
Open Access
Communication
Open Data
Energy Flow and Nutrient Cycling in the Open Ecosystem
This work by Karen Cangialosi and Susan Whittemore is licensed under a
Creative Commons Attribution 4.0 International License
Follow us on twitter
@karencang
@suwhitte
Resources for Open Pedagogical Practices in Open Science
Name Description URL
Open Science Notebook Network Open Access Repository for Science Methods
http://onsnetwork.org/
Protocols.io Open Access Repository for Science Methods
https://www.protocols.io/
Data World
1000's of datasets in a wide variety of subjects. For example,
data.world/datasets/biology
https://data.world/
Open Data as Open Educational Resources: Case Studies of
Emerging Practices (EDDIE) Open Data is an umbrella term describing openly-licensed,
interoperable, and reusable datasets which have been created
and made available to the public by national or local
governments, academic researchers, or other organisations.
http://education.okfn.org/handbooks/open-data-as-open-
educational-resources/
Case Studies of Emerging Practices PDF at this link
https://education.okfn.org/files/2015/11/Book-Open-
Data-as-Open-Educational-Resources1.pdf
Using Large Datasets for Open-Ended Inquiry in Undergraduate
Science Classrooms
Using Large Datasets for Open-Ended Inquiry in Undergraduate
Science Classrooms
https://academic.oup.com/bioscience/article/67/12/1052
/4582209
U.S. Center for Disease Control (CDC), National Health and
Nutrition Examination Survey Dataset where students can pose and test hypotheses https://wwwn.cdc.gov/nchs/nhanes/
Biorxiv open access preprint respository for biology https://www.biorxiv.org/
Hypothesis web annotation software https://web.hypothes.is/
Access this google doc at: https://karencang.net/open-science/

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Supporting Open Science with Open Pedagogy

  • 1. Supporting Open Science with Open Pedagogy Karen Cangialosi Susan Whittemore Dept of Biology Keene State College Keene, NH USA
  • 2. Open Pedagogy • Learners contribute to, not just consume knowledge • Community and collaboration • Connection to the wider public • Student Agency, Learner-driven • Critical approach to the use of tools and technology ‘Floor at domains17’ by Karen Cangialosi [CC BY 4.0] Modified from content by Robin DeRosa
  • 4. Open Educational Resources by Ron Mader [CC BY 2.0] The Open License and the 5 R’s • Reuse • Revise • Remix • Redistribute • Retain
  • 5. The Many Flavors of OER • “Traditional” OER as textbook (e.g. OpenStax, pressbooks) • Ancillary materials: test banks, study guides, lesson plans, etc • Curated links on websites • Open Google Docs • Open Access published articles • Open Datasets • Open Lab notebooks and Methods repositories • Open Videos • Open Lab Simulations • Open Source software/tools • and more… Popsicles by Colored Pencil Magazine [CC BY 2.0]
  • 6. By G.emmerich [CC BY-SA 3.0] • Transparency in experimental methodology, observation, and collection of data • Public availability and reusability of scientific data • Public accessibility and transparency of scientific communication • Using web-based tools to facilitate scientific collaboration From What, exactly, is Open Science? Posted on July 28, 2009 by Dan Gezelter Open Science
  • 7. • Open Science • Open Data • Citizen Science • Science Communication • Open Access Publication Open Pedagogy
  • 8. The Pedagogy of Open Science Open Pedagogy in Science By G.emmerich [CC BY-SA 3.0] = teaching students the value and practices of opening up scientific work = using Open Pedagogy practices in STEM courses
  • 9. The Pedagogy of Open Science
  • 10. Open Science Notebook Network Transparency in experimental methodology, observation, and collection of data http://onsnetwork.org/
  • 11. Open Protocols Transparency in experimental methodology, observation, and collection of data https://www.protocols.io/
  • 12. KSC Intro biology students create wiki pages to use as their open lab notebook Transparency in experimental methodology, observation, and collection of data
  • 13. Student shares methods and data from her independent research project Transparency in experimental methodology, observation, and collection of data
  • 14. Public availability and reusability of scientific data or Open Data as OER We like this definition of Open Data (shared by Javiera Atenas and Leo Havemann) “Open Data is an umbrella term describing openly-licensed, interoperable, and reusable datasets which have been created and made available to the public...” https://data.world/datasets/biology
  • 15. Public availability and reusability of scientific data or Open Data as OER CEDDIElick to add text
  • 16. Public availability and reusability of scientific data or Open Data as OER Open data repositories used in KSC Bioinformatics Course
  • 17. Can pose hypotheses and then test them with this health-related open data repository
  • 18. Faculty-Student Co-authored and Openly Licensed Published Research Article CC BY NC ND Public accessibility and transparency of scientific communication
  • 19. Web annotation: Community & Collaboration Public accessibility and transparency of scientific communication Open Access Scholarly Articles as OER
  • 20. Public Accessibility: Students write about local contamination sites and potential consequences to humans and wildlife as public service #SciComm
  • 21. Audience Beyond the Professor Connecting to the Public and other Scientists Non-disposable Assignments Science Communication
  • 22. Twitter Research Gate Linked-InUsing web-based tools to facilitate scientific collaboration
  • 25. Open Pedagogy Classroom Open Science Research Lab Open Access Communication Open Data Energy Flow and Nutrient Cycling in the Open Ecosystem
  • 26. This work by Karen Cangialosi and Susan Whittemore is licensed under a Creative Commons Attribution 4.0 International License Follow us on twitter @karencang @suwhitte
  • 27. Resources for Open Pedagogical Practices in Open Science Name Description URL Open Science Notebook Network Open Access Repository for Science Methods http://onsnetwork.org/ Protocols.io Open Access Repository for Science Methods https://www.protocols.io/ Data World 1000's of datasets in a wide variety of subjects. For example, data.world/datasets/biology https://data.world/ Open Data as Open Educational Resources: Case Studies of Emerging Practices (EDDIE) Open Data is an umbrella term describing openly-licensed, interoperable, and reusable datasets which have been created and made available to the public by national or local governments, academic researchers, or other organisations. http://education.okfn.org/handbooks/open-data-as-open- educational-resources/ Case Studies of Emerging Practices PDF at this link https://education.okfn.org/files/2015/11/Book-Open- Data-as-Open-Educational-Resources1.pdf Using Large Datasets for Open-Ended Inquiry in Undergraduate Science Classrooms Using Large Datasets for Open-Ended Inquiry in Undergraduate Science Classrooms https://academic.oup.com/bioscience/article/67/12/1052 /4582209 U.S. Center for Disease Control (CDC), National Health and Nutrition Examination Survey Dataset where students can pose and test hypotheses https://wwwn.cdc.gov/nchs/nhanes/ Biorxiv open access preprint respository for biology https://www.biorxiv.org/ Hypothesis web annotation software https://web.hypothes.is/ Access this google doc at: https://karencang.net/open-science/