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Genetic control of wheat
 adaptation to conservation
         agriculture
Richard Trethowan, Tariq Mahmood, Zulfiqar Ali, Klaus Oldach
Implications of breeding crops
   adapted to conservation tillage

• New diseases (tan spot,
  root rots etc)
• More challenging seed
  bed
• Weed competition
• Changes in nitrogen
  management (N-use
  efficiency)
• Tillage x cultivar
  interaction
Published examinations of genotype x
         tillage interactions
Crop      Genotype Literature
          x Tillage
Wheat        +/-    Gutierrez (2005); Cox (1991)
Barley        -     Ullrich & Muir (1986)
Sorghum       -     Francis et al. (1985)
Maize        +/-    Newhouse (1985); Brakke et al (1983);
                    Newhouse & Crosbie (1983)
Rice          -     Melo et al (2005)
Soybean       -     Elmore (1990); Pfeiffer (1987)
Pulses       ?      NA
Gutierrez (2005):
Genotype x tillage study in wheat in Mexico


Diverse set of wheat cultivars:
Berkut, Sokoll, Kambara, Weebill 1, Rebeca F20006, Romoga
  F96, Nahuatl F2000, Juchi F2000, Temporalera M87,
  Tlaxcala F2000



Diverse environments:
Irrigated & rainfed over two years
Analysis of variance; El Batan 2003 and
           2004 – rainfed (Gutierrez, 2005)
                                                                Mixograph


                    Yield   Biomass   TKW   P%   SDS   Height   Mixing   Stability
                                                                time

Year                  **       **      **   **    **     ns       ns          **

Tillage               **       **      ns   ns    **      *        *          ns

Cultivar              **       **      **   **    **     **       **          **

Cultivar x Year       **       **      **   **    **     **       **          **

Cultivar x            **       *       **   **    **     ns       ns          **
Tillage
Cultivar x Till x     ns       ns      **   ns    *      ns       ns          ns
Year
Wheat grain yield for different tillage and planting
   methods at El Batan (Mexico) over 2 years



                     2500

                     2000
       Yield kg/ha




                     1500

                     1000

                     500
                            a          b       b        b
                       0
                            ZT flat   ZT beds CT flat CT beds


                      ZT = zero tillage; CT conventional tillage
Yield of a common set of 50 genotypes under
contrasting tillage regimes in Australia and Mexico
                    over 2 years

                                                               • Higher yields under
              7000                                             zero-till
                                        Mexico
              6000                                             • No significant
Yield kg/ha




              5000                                             genotype x tillage
                     Australia                                 interaction in Mexico
              4000
                                 (NS)
              3000
              2000
              1000
                                                   Zero Till
               2 7
               2 7
               2 8
               2 8
               2 7
               2 7
               2 8
                  8
                 0
                 0
                 0
                 0
                 0
                 0
                 0
                 0
                0
                0
                0
                0
                0
                0
                0
                0

                                                   Comp
               2




                                                   Till



                                                 Source: Trethowan & Manes
Can a genotype x tillage interaction be designed?


               Five crosses among lines with
             contrasting responses under zero-
                           tillage




Always selected under                 Always selected under
zero-tillage alternating                conventional tillage
 between rainfed and               alternating between rainfed
  irrigated conditions               and irrigated conditions




            Advanced lines from both selection
            regimes evaluated under both zero
                 and conventional tillage

                                                 Sayre & Trethowan
Effects of Cross and Selection System on Grain Yield
                                     Averaged over 2005, 2006 and 2007
                                     Cross x Selection System LSD (0.05) = 143 kg/ha


                      6400

                      6200
Grain yield (kg/ha)




                      6000

                      5800

                      5600

                      5400
                      5200     a     b         a     b         a     a          a    a         a   a
                      5000
                             SERI/..BERKUT   SW94.../PBW65   FILIN./PASTOR   MILAN./PASTOR   PFAU../AMAD

                                                                Cross

                                               ZERO TILL SELECTION   CONV TILL SELECTION
Genetic variability for
improved adaptation to
conservation agriculture
Traits important in crop emergence & establishment
Trait                              Recent evidence
Coleoptile length                  Trethowan et al (2001); Rebetzke et al (2004
                                   & 2007); Erayman et al (2006)
Coleoptile thickness               Rebetzke et al (2004)
Emergence from depth               Trethowan et al (2005); Joshi et al (2007)
Rapid height growth                Olesen et al (2004)
Seedling vigour                    Liang and Richards (1999); Trethowan et al
                                   (2005); Erayman et al (2006)
Kernel weight & embryo size        Liang and Richards (1999)
Faster stubble decomposition       Joshi et al (2007)
Weed suppression & Allelopathy     Olesen et al (2004); Bertholdsson, 2005
Early biomass/specific leaf area   Liang and Richards (1999); Olesen et al
                                   (2004)
Deeper roots                       Reynolds and Trethowan (2007)
N-use efficiency                   Van Ginkel et al (2001); Trethowan et al
                                   (2005)
Disease resistance                 Trethowan et al (2005); Joshi et al (2007)
Seedling temperature tolerance     Boubaker & Yamada (1991); Dell’Aquila and
                                   Spada (1994)
Useful sources of
                                     genetic variability in
                                            wheat
           +
                               • Cultivars released in areas where farmers
                                       have adopted CA
                               • Hexaploid primary synthetics
    AB              D
                               • Landraces
T. durum         A. tauschii
                               • Translocations from wild relatives
                               • Alternative dwarfing genes
                               • Sources of resistance to foliar blights and
                                       root rots



           ABD
Effect of different height reducing
   genes on coleoptile length in wheat
Rht gene    GA insensitive GA sensitive
            (-) coleoptile (+) coleoptile
Rht-B1b             X

Rht-D1b             X

Rht 7               X

Rht 8                               X

Rht 9                               X

Rht 12                              X


Source: Rebetzke et al 2004. 2007
Genotype x tillage practice trials on two soil types at
Narrabri:
Berkut/Krichauff mapping population (160 lines)
Mean yield across tillage regimes,
     years and soil types at Narrabri

Tillage          Zero till       Conven till    P<
regime
Heading (days)   108.5 a         109.1 b        0.05
Yield (kg/ha)    1702 a          1368 b         0.001


Soil type        Grey vertisol   Red kandosol

Heading (days)   109 a           108.6 a        ns
Yield (kg/ha)    1733 a          1337 b         0.001
The yield difference between zero-tillage (ZT) and
conventional tillage (CT): means based on 2 sites in
                                                              2 years.


                                  800
 Yield difference kg/ha (ZT-CT)




                                  600        Krichauff
                                  400

                                  200
                                                                               Berkut
                                    0
                                         0     20        40   60      80      100       120   140   160
                                  -200

                                  -400

                                  -600
                                                                   Genotype
Significant QTL effects for yield under contrasting
      tillage regimes on two soil types in 2 years


Chr   Interval          Treatment   Soil type   Additive   Allele
                                                effect %
1B    gwm268/wPt-3475 CT            Grey v      8          K
1B    wPt-1313/gmw140 CT            Grey v      10         K
1D    cdf19/wmc216      CT          Red k       10         K
2D    wPt-3728/cfd44    ZT          Grey v      9          K
2D    gmw484/wmc27      ZT          Red k       9          B
5A    cfa2155/wPt1370   ZT          Grey v      25         B
5A    cfa2115/wPt1370   CT          Grey v      14         B
5A    cfa2115/wPt1370   CT          Red k       9          B
5B    wmc99/wPt2373     ZT          Grey v      12         B
Select diverse germplasm & screen for response to tillage measuring
yield, disease and product quality to determine the extent of genotype
                        x tillage interactions.


   Combine in crosses                        Identify parents with
    with emphasis on                             extreme trait
    adaptation to the                         expression. Include
   target conditions &                           parents with
          QTLs                               complementary QTLs


  Implement a selection                       Evaluate fixed lines
   strategy. Eg combine                        across a range of
 deep planting in a zero-                   conservation agricultural
    tillage system with                        practices in multi-
  disease inoculation &                      locational trials in the
   marker assisted sel.                          target region.



                        Select lines with high yield,
                       appropriate quality and stable
                        performance across farmer
                         practices within the target
                             region for release.
Acknowledgments:
CIMMYT – Yann
  Manes/Ken Sayre/Bram
  Govaerts
SARDI – Klaus
  Oldach, Hugh Wallwork
Team at PBI Sydney &
  Narrabri
Molecular Plant Breeding
  CRC

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Genetic control of wheat adaption to CA. Richard Trethowan

  • 1. Genetic control of wheat adaptation to conservation agriculture Richard Trethowan, Tariq Mahmood, Zulfiqar Ali, Klaus Oldach
  • 2. Implications of breeding crops adapted to conservation tillage • New diseases (tan spot, root rots etc) • More challenging seed bed • Weed competition • Changes in nitrogen management (N-use efficiency) • Tillage x cultivar interaction
  • 3. Published examinations of genotype x tillage interactions Crop Genotype Literature x Tillage Wheat +/- Gutierrez (2005); Cox (1991) Barley - Ullrich & Muir (1986) Sorghum - Francis et al. (1985) Maize +/- Newhouse (1985); Brakke et al (1983); Newhouse & Crosbie (1983) Rice - Melo et al (2005) Soybean - Elmore (1990); Pfeiffer (1987) Pulses ? NA
  • 4. Gutierrez (2005): Genotype x tillage study in wheat in Mexico Diverse set of wheat cultivars: Berkut, Sokoll, Kambara, Weebill 1, Rebeca F20006, Romoga F96, Nahuatl F2000, Juchi F2000, Temporalera M87, Tlaxcala F2000 Diverse environments: Irrigated & rainfed over two years
  • 5. Analysis of variance; El Batan 2003 and 2004 – rainfed (Gutierrez, 2005) Mixograph Yield Biomass TKW P% SDS Height Mixing Stability time Year ** ** ** ** ** ns ns ** Tillage ** ** ns ns ** * * ns Cultivar ** ** ** ** ** ** ** ** Cultivar x Year ** ** ** ** ** ** ** ** Cultivar x ** * ** ** ** ns ns ** Tillage Cultivar x Till x ns ns ** ns * ns ns ns Year
  • 6. Wheat grain yield for different tillage and planting methods at El Batan (Mexico) over 2 years 2500 2000 Yield kg/ha 1500 1000 500 a b b b 0 ZT flat ZT beds CT flat CT beds ZT = zero tillage; CT conventional tillage
  • 7. Yield of a common set of 50 genotypes under contrasting tillage regimes in Australia and Mexico over 2 years • Higher yields under 7000 zero-till Mexico 6000 • No significant Yield kg/ha 5000 genotype x tillage Australia interaction in Mexico 4000 (NS) 3000 2000 1000 Zero Till 2 7 2 7 2 8 2 8 2 7 2 7 2 8 8 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Comp 2 Till Source: Trethowan & Manes
  • 8. Can a genotype x tillage interaction be designed? Five crosses among lines with contrasting responses under zero- tillage Always selected under Always selected under zero-tillage alternating conventional tillage between rainfed and alternating between rainfed irrigated conditions and irrigated conditions Advanced lines from both selection regimes evaluated under both zero and conventional tillage Sayre & Trethowan
  • 9. Effects of Cross and Selection System on Grain Yield Averaged over 2005, 2006 and 2007 Cross x Selection System LSD (0.05) = 143 kg/ha 6400 6200 Grain yield (kg/ha) 6000 5800 5600 5400 5200 a b a b a a a a a a 5000 SERI/..BERKUT SW94.../PBW65 FILIN./PASTOR MILAN./PASTOR PFAU../AMAD Cross ZERO TILL SELECTION CONV TILL SELECTION
  • 10. Genetic variability for improved adaptation to conservation agriculture
  • 11. Traits important in crop emergence & establishment Trait Recent evidence Coleoptile length Trethowan et al (2001); Rebetzke et al (2004 & 2007); Erayman et al (2006) Coleoptile thickness Rebetzke et al (2004) Emergence from depth Trethowan et al (2005); Joshi et al (2007) Rapid height growth Olesen et al (2004) Seedling vigour Liang and Richards (1999); Trethowan et al (2005); Erayman et al (2006) Kernel weight & embryo size Liang and Richards (1999) Faster stubble decomposition Joshi et al (2007) Weed suppression & Allelopathy Olesen et al (2004); Bertholdsson, 2005 Early biomass/specific leaf area Liang and Richards (1999); Olesen et al (2004) Deeper roots Reynolds and Trethowan (2007) N-use efficiency Van Ginkel et al (2001); Trethowan et al (2005) Disease resistance Trethowan et al (2005); Joshi et al (2007) Seedling temperature tolerance Boubaker & Yamada (1991); Dell’Aquila and Spada (1994)
  • 12. Useful sources of genetic variability in wheat + • Cultivars released in areas where farmers have adopted CA • Hexaploid primary synthetics AB D • Landraces T. durum A. tauschii • Translocations from wild relatives • Alternative dwarfing genes • Sources of resistance to foliar blights and root rots ABD
  • 13. Effect of different height reducing genes on coleoptile length in wheat Rht gene GA insensitive GA sensitive (-) coleoptile (+) coleoptile Rht-B1b X Rht-D1b X Rht 7 X Rht 8 X Rht 9 X Rht 12 X Source: Rebetzke et al 2004. 2007
  • 14. Genotype x tillage practice trials on two soil types at Narrabri: Berkut/Krichauff mapping population (160 lines)
  • 15. Mean yield across tillage regimes, years and soil types at Narrabri Tillage Zero till Conven till P< regime Heading (days) 108.5 a 109.1 b 0.05 Yield (kg/ha) 1702 a 1368 b 0.001 Soil type Grey vertisol Red kandosol Heading (days) 109 a 108.6 a ns Yield (kg/ha) 1733 a 1337 b 0.001
  • 16. The yield difference between zero-tillage (ZT) and conventional tillage (CT): means based on 2 sites in 2 years. 800 Yield difference kg/ha (ZT-CT) 600 Krichauff 400 200 Berkut 0 0 20 40 60 80 100 120 140 160 -200 -400 -600 Genotype
  • 17. Significant QTL effects for yield under contrasting tillage regimes on two soil types in 2 years Chr Interval Treatment Soil type Additive Allele effect % 1B gwm268/wPt-3475 CT Grey v 8 K 1B wPt-1313/gmw140 CT Grey v 10 K 1D cdf19/wmc216 CT Red k 10 K 2D wPt-3728/cfd44 ZT Grey v 9 K 2D gmw484/wmc27 ZT Red k 9 B 5A cfa2155/wPt1370 ZT Grey v 25 B 5A cfa2115/wPt1370 CT Grey v 14 B 5A cfa2115/wPt1370 CT Red k 9 B 5B wmc99/wPt2373 ZT Grey v 12 B
  • 18. Select diverse germplasm & screen for response to tillage measuring yield, disease and product quality to determine the extent of genotype x tillage interactions. Combine in crosses Identify parents with with emphasis on extreme trait adaptation to the expression. Include target conditions & parents with QTLs complementary QTLs Implement a selection Evaluate fixed lines strategy. Eg combine across a range of deep planting in a zero- conservation agricultural tillage system with practices in multi- disease inoculation & locational trials in the marker assisted sel. target region. Select lines with high yield, appropriate quality and stable performance across farmer practices within the target region for release.
  • 19. Acknowledgments: CIMMYT – Yann Manes/Ken Sayre/Bram Govaerts SARDI – Klaus Oldach, Hugh Wallwork Team at PBI Sydney & Narrabri Molecular Plant Breeding CRC