4. Beadle & Tatum 1941 | 1958
George Beadle Edward Tatum
Nobel Prize for their discovery that
genes act by regulating definite
chemical events
one gene : one enzyme hypothesis
one gene : one polypeptide
Enzymes are polypeptides- updated findings are:
5. Transcription
Making a single strand of mRNA
transcribed DNA strand = template strand
untranscribed DNA strand = coding strand
• same sequence as RNA
synthesis of complementary RNA strand at transcription
bubble
Enzyme used: RNA polymerase
template strand
rewinding
mRNA RNA polymerase
unwinding
coding strand
DNA
C C
C
C
C
C
C
C
C C
C
G
G
G
G
G G
G G
G
G
GA
A
A
A A
A
A
A
A
A A
A
AT
T T
T
T
T
T
T
T T
T
T
U U
5′
3′
5′
3′
3′
5′
build RNA 5′→3′
Transcription
animation
6. 3 Processes of
Transcription
In Nucleus
1. Initiation
DNA unzipped into 2 separate strands by DNA Helicase.
Promoter region identified, Initiation Complex Made
2. Elongation
Free floating RNA NITROGEN BASES in the nucleus pair up
w/unzipped DNA NITROGEN BASES by RNA Polymerase
Ex: DNA template: 3’ –C G T- 5’
3. Termination
Complement pairing is done at the end of gene
-a single strand of RNA is released
7. Which gene will be Tx?
1. Initiation
• Promoter region
– binding site before beginning of gene
– TATA box catches attention
8. At Promoter Region, Transcription
Factors make Initiation Complex
• Initiation complex
– transcription factors bind to promoter region
suite of proteins which bind to DNA
turn on or off transcription
– trigger the binding of RNA polymerase to DNA
9. 2. Elongation
Matching bases of DNA & RNA
• Match RNA bases to DNA
bases on one of the DNA
strands
U
A G GGGGGT T A C A C T T T T TC C C CA A
U
U
U
U
U
G
G
A
A
A C C
RNA
polymerase
C
C
C
C
C
G
G
G
G
A
A
A
A
A
5' 3'
11. mRNA Strand Needs Processing:
After Transcription
• In our DNA there are sequences that are
not needed to make proteins.
• Due to complementing, these region end
up in mRNA after Tx.
• These regions (aka=some junk)must be
removed before Tl.
12. Eukaryotic genes have junk=
mRNA have junk!
• Eukaryotic genes are not continuous
– exons = the real gene
expressed / coding DNA
– introns = the junk
In between sequence
eukaryotic DNA
exon = coding (expressed) sequence
intron = noncoding (inbetween) sequence
introns
come out of RNA!
15. Result:
Genetic code from DNA is transferred to mRNA
The code obtained from DNA lets the mRNA
know which amino acids to pick up:
• code is a set of 3 nitrogen bases = Codon
Overall Process of Transcription
18. TranslationTranslation
• Process that converts mRNA into
protein
• Proteins are made of monomers
of AA
• Tl occurs on ribosomes
• Where are ribosomes?
19. Ribosomes
Facilitates coupling of
tRNA anticodon to
mRNA codon
• organelle & enzyme!!
Structure
ribosomal RNA (rRNA) & proteins
2 subunits
large
small E P A
Protein synthesis/quiz
20. Ribosomes
Met
5'
3'
U
U
A C
A G
APE
A site (acceptor site)
• holds the newest tRNA carrying the next
amino acid to be added to chain
P site (peptidyl-tRNA site)
• holds tRNA carrying growing polypeptide
chain
E site (exit site)
• empty tRNA leaves ribosome
from exit site
Protein synthesis 2
21. tRNA: remindertRNA: reminder
• tRNA = transfer RNA
• picks up the correct amino acids
and carries them to the mRNA
strand forming the protein
• Location of anticodon, the
complement to the mRNA
codon
22. 3 Steps of Translation
making proteins
1. Initiation
2. Elongation
3. Termination
23. Building a polypeptide
Initiation
brings together mRNA, ribosome subunits, initiator
tRNA
Elongation
adding amino acids based on codon sequence
Termination
end codon
123
Leu
Leu Leu Leu
tRNA
Met Met
Met Met
PE A
mRNA
5' 5' 5' 5'
3' 3' 3'
3'
U UA AA
AC
C
C
AU UG G
GU
U
A
AA
AC
C
C
AU UG G
GU
U
A
AA
AC
C
C
AU UG G
GU U
A
AAC
CAU UG G
G
A
C
Val
Ser
Ala
Trp
release
factor
A
A A
CC
U UGG
3'
How translation works
34. Prokaryote vs. Eukaryote genes
Prokaryotes
DNA in cytoplasm
circular chromosome
naked DNA
no introns
Tx & Tl can occur simultaneously
Eukaryotes
DNA in nucleus
linear chromosomes
DNA wound on histone proteins
introns vs. exons
time & physical separation b/w Tx & Tl:
~1 hr from DNA to protein
Editor's Notes
Walter Gilbert hypothesis:
Maybe exons are functional units and introns make it easier for them to recombine, so as to produce new proteins with new properties through new combinations of domains.
Introns give a large area for cutting genes and joining together the pieces without damaging the coding region of the gene…. patching genes together does not have to be so precise.