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TRANSCRIPTION /TRANSCRIPTION /
TRANSLATIONTRANSLATION
Take Notes on 17R
Transcription- process that makes mRNA from
DNA
The Central DogmaThe Central Dogma
AP Biology 2007-2008
Transcription
from
DNA nucleic acid language
to
RNA nucleic acid language
Only a specific part of DNA is Tx at one time,
NOT the entire strand of DNA
Beadle & Tatum 1941 | 1958
George Beadle Edward Tatum
Nobel Prize for their discovery that
genes act by regulating definite
chemical events
one gene : one enzyme hypothesis
one gene : one polypeptide
Enzymes are polypeptides- updated findings are:
Transcription
Making a single strand of mRNA
transcribed DNA strand = template strand
untranscribed DNA strand = coding strand
• same sequence as RNA
synthesis of complementary RNA strand at transcription
bubble
Enzyme used: RNA polymerase
template strand
rewinding
mRNA RNA polymerase
unwinding
coding strand
DNA
C C
C
C
C
C
C
C
C C
C
G
G
G
G
G G
G G
G
G
GA
A
A
A A
A
A
A
A
A A
A
AT
T T
T
T
T
T
T
T T
T
T
U U
5′
3′
5′
3′
3′
5′
build RNA 5′→3′
Transcription
animation
3 Processes of
Transcription
In Nucleus
1. Initiation
DNA unzipped into 2 separate strands by DNA Helicase.
Promoter region identified, Initiation Complex Made
2. Elongation
Free floating RNA NITROGEN BASES in the nucleus pair up
w/unzipped DNA NITROGEN BASES by RNA Polymerase
Ex: DNA template: 3’ –C G T- 5’
3. Termination
Complement pairing is done at the end of gene
-a single strand of RNA is released
Which gene will be Tx?
1. Initiation
• Promoter region
– binding site before beginning of gene
– TATA box catches attention
At Promoter Region, Transcription
Factors make Initiation Complex
• Initiation complex
– transcription factors bind to promoter region
suite of proteins which bind to DNA
turn on or off transcription
– trigger the binding of RNA polymerase to DNA
2. Elongation
Matching bases of DNA & RNA
• Match RNA bases to DNA
bases on one of the DNA
strands
U
A G GGGGGT T A C A C T T T T TC C C CA A
U
U
U
U
U
G
G
A
A
A C C
RNA
polymerase
C
C
C
C
C
G
G
G
G
A
A
A
A
A
5' 3'
3. Termination
RNA Polymerase reaches the end of the gene
and the RNA P, DNA, and new mRNA
dissociate.
mRNA Strand Needs Processing:
After Transcription
• In our DNA there are sequences that are
not needed to make proteins.
• Due to complementing, these region end
up in mRNA after Tx.
• These regions (aka=some junk)must be
removed before Tl.
Eukaryotic genes have junk=
mRNA have junk!
• Eukaryotic genes are not continuous
– exons = the real gene
expressed / coding DNA
– introns = the junk
In between sequence
eukaryotic DNA
exon = coding (expressed) sequence
intron = noncoding (inbetween) sequence
introns
come out of RNA!
After Transcription
mRNA ProcessingmRNA Processing
AfterTranscription Review
Which mRNA sequences are removed?
Why are they removed?
mRNA Processing
Result:
Genetic code from DNA is transferred to mRNA
The code obtained from DNA lets the mRNA
know which amino acids to pick up:
• code is a set of 3 nitrogen bases = Codon
Overall Process of Transcription
mRNA
DNA
RNA
Polymerase
TranscriptionTranscription
Adenine (DNA and RNA)
Cystosine (DNA and RNA)
Guanine(DNA and RNA)
Thymine (DNA only)
Uracil (RNA only)
AP Biology 2007-2008
Translation
from
nucleic acid language
to
amino acid language
TranslationTranslation
• Process that converts mRNA into
protein
• Proteins are made of monomers
of AA
• Tl occurs on ribosomes
• Where are ribosomes?
Ribosomes
Facilitates coupling of
tRNA anticodon to
mRNA codon
• organelle & enzyme!!
Structure
ribosomal RNA (rRNA) & proteins
2 subunits
 large
 small E P A
Protein synthesis/quiz
Ribosomes
Met
5'
3'
U
U
A C
A G
APE
A site (acceptor site)
• holds the newest tRNA carrying the next
amino acid to be added to chain
P site (peptidyl-tRNA site)
• holds tRNA carrying growing polypeptide
chain
E site (exit site)
• empty tRNA leaves ribosome
from exit site
Protein synthesis 2
tRNA: remindertRNA: reminder
• tRNA = transfer RNA
• picks up the correct amino acids
and carries them to the mRNA
strand forming the protein
• Location of anticodon, the
complement to the mRNA
codon
3 Steps of Translation
making proteins
1. Initiation
2. Elongation
3. Termination
Building a polypeptide
Initiation
brings together mRNA, ribosome subunits, initiator
tRNA
Elongation
adding amino acids based on codon sequence
Termination
end codon
123
Leu
Leu Leu Leu
tRNA
Met Met
Met Met
PE A
mRNA
5' 5' 5' 5'
3' 3' 3'
3'
U UA AA
AC
C
C
AU UG G
GU
U
A
AA
AC
C
C
AU UG G
GU
U
A
AA
AC
C
C
AU UG G
GU U
A
AAC
CAU UG G
G
A
C
Val
Ser
Ala
Trp
release
factor
A
A A
CC
U UGG
3'
How translation works
Step 1: Initiation
a)Ribosome attaches to the mRNA
b) Start codon is always AUG
Step 2: Elongation
a) tRNA anticodon matches with codon on mRNA
b) Peptide bonds are formed between the AA
Elongation (continued)
c) AA released from tRNA
d) Ribosome moves down the mRNA
and continues adding AA
Step 3: Termination
a)The ribosome reaches one of three stop
codons (UAA, UAG, UGA)
b) The mRNA and protein (polypeptide chain) is
released
The Decoder
This allows humans
to translate the
mRNA code into
proteins
There are 20 Amino Acids
mRNA Start codon
Ribosome
Methionine
Phenylalanine
tRNA
Lysine
Nucleus
TranslationTranslation
mRNA
mRNA
Codon on
mRNA Translation direction
Amino Acid
tRNA
tRNA
Ribosome
Growing polypeptide
chain
mRNA
Translation (continued)Translation (continued)
Anticodon
on tRNA
The Decoder
This allows humans
to translate the
mRNA code into
proteins
Prokaryote vs. Eukaryote genes
Prokaryotes
DNA in cytoplasm
circular chromosome
naked DNA
no introns
Tx & Tl can occur simultaneously
Eukaryotes
DNA in nucleus
linear chromosomes
DNA wound on histone proteins
introns vs. exons
time & physical separation b/w Tx & Tl:
~1 hr from DNA to protein

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DNA to Protein: The Central Dogma

  • 1. TRANSCRIPTION /TRANSCRIPTION / TRANSLATIONTRANSLATION Take Notes on 17R Transcription- process that makes mRNA from DNA
  • 2. The Central DogmaThe Central Dogma
  • 3. AP Biology 2007-2008 Transcription from DNA nucleic acid language to RNA nucleic acid language Only a specific part of DNA is Tx at one time, NOT the entire strand of DNA
  • 4. Beadle & Tatum 1941 | 1958 George Beadle Edward Tatum Nobel Prize for their discovery that genes act by regulating definite chemical events one gene : one enzyme hypothesis one gene : one polypeptide Enzymes are polypeptides- updated findings are:
  • 5. Transcription Making a single strand of mRNA transcribed DNA strand = template strand untranscribed DNA strand = coding strand • same sequence as RNA synthesis of complementary RNA strand at transcription bubble Enzyme used: RNA polymerase template strand rewinding mRNA RNA polymerase unwinding coding strand DNA C C C C C C C C C C C G G G G G G G G G G GA A A A A A A A A A A A AT T T T T T T T T T T T U U 5′ 3′ 5′ 3′ 3′ 5′ build RNA 5′→3′ Transcription animation
  • 6. 3 Processes of Transcription In Nucleus 1. Initiation DNA unzipped into 2 separate strands by DNA Helicase. Promoter region identified, Initiation Complex Made 2. Elongation Free floating RNA NITROGEN BASES in the nucleus pair up w/unzipped DNA NITROGEN BASES by RNA Polymerase Ex: DNA template: 3’ –C G T- 5’ 3. Termination Complement pairing is done at the end of gene -a single strand of RNA is released
  • 7. Which gene will be Tx? 1. Initiation • Promoter region – binding site before beginning of gene – TATA box catches attention
  • 8. At Promoter Region, Transcription Factors make Initiation Complex • Initiation complex – transcription factors bind to promoter region suite of proteins which bind to DNA turn on or off transcription – trigger the binding of RNA polymerase to DNA
  • 9. 2. Elongation Matching bases of DNA & RNA • Match RNA bases to DNA bases on one of the DNA strands U A G GGGGGT T A C A C T T T T TC C C CA A U U U U U G G A A A C C RNA polymerase C C C C C G G G G A A A A A 5' 3'
  • 10. 3. Termination RNA Polymerase reaches the end of the gene and the RNA P, DNA, and new mRNA dissociate.
  • 11. mRNA Strand Needs Processing: After Transcription • In our DNA there are sequences that are not needed to make proteins. • Due to complementing, these region end up in mRNA after Tx. • These regions (aka=some junk)must be removed before Tl.
  • 12. Eukaryotic genes have junk= mRNA have junk! • Eukaryotic genes are not continuous – exons = the real gene expressed / coding DNA – introns = the junk In between sequence eukaryotic DNA exon = coding (expressed) sequence intron = noncoding (inbetween) sequence introns come out of RNA!
  • 14. AfterTranscription Review Which mRNA sequences are removed? Why are they removed? mRNA Processing
  • 15. Result: Genetic code from DNA is transferred to mRNA The code obtained from DNA lets the mRNA know which amino acids to pick up: • code is a set of 3 nitrogen bases = Codon Overall Process of Transcription
  • 16. mRNA DNA RNA Polymerase TranscriptionTranscription Adenine (DNA and RNA) Cystosine (DNA and RNA) Guanine(DNA and RNA) Thymine (DNA only) Uracil (RNA only)
  • 17. AP Biology 2007-2008 Translation from nucleic acid language to amino acid language
  • 18. TranslationTranslation • Process that converts mRNA into protein • Proteins are made of monomers of AA • Tl occurs on ribosomes • Where are ribosomes?
  • 19. Ribosomes Facilitates coupling of tRNA anticodon to mRNA codon • organelle & enzyme!! Structure ribosomal RNA (rRNA) & proteins 2 subunits  large  small E P A Protein synthesis/quiz
  • 20. Ribosomes Met 5' 3' U U A C A G APE A site (acceptor site) • holds the newest tRNA carrying the next amino acid to be added to chain P site (peptidyl-tRNA site) • holds tRNA carrying growing polypeptide chain E site (exit site) • empty tRNA leaves ribosome from exit site Protein synthesis 2
  • 21. tRNA: remindertRNA: reminder • tRNA = transfer RNA • picks up the correct amino acids and carries them to the mRNA strand forming the protein • Location of anticodon, the complement to the mRNA codon
  • 22. 3 Steps of Translation making proteins 1. Initiation 2. Elongation 3. Termination
  • 23. Building a polypeptide Initiation brings together mRNA, ribosome subunits, initiator tRNA Elongation adding amino acids based on codon sequence Termination end codon 123 Leu Leu Leu Leu tRNA Met Met Met Met PE A mRNA 5' 5' 5' 5' 3' 3' 3' 3' U UA AA AC C C AU UG G GU U A AA AC C C AU UG G GU U A AA AC C C AU UG G GU U A AAC CAU UG G G A C Val Ser Ala Trp release factor A A A CC U UGG 3' How translation works
  • 24. Step 1: Initiation a)Ribosome attaches to the mRNA b) Start codon is always AUG
  • 25. Step 2: Elongation a) tRNA anticodon matches with codon on mRNA b) Peptide bonds are formed between the AA
  • 26. Elongation (continued) c) AA released from tRNA d) Ribosome moves down the mRNA and continues adding AA
  • 27. Step 3: Termination a)The ribosome reaches one of three stop codons (UAA, UAG, UGA) b) The mRNA and protein (polypeptide chain) is released
  • 28. The Decoder This allows humans to translate the mRNA code into proteins
  • 29. There are 20 Amino Acids
  • 31. mRNA Codon on mRNA Translation direction Amino Acid tRNA tRNA Ribosome Growing polypeptide chain mRNA Translation (continued)Translation (continued) Anticodon on tRNA
  • 32. The Decoder This allows humans to translate the mRNA code into proteins
  • 33.
  • 34. Prokaryote vs. Eukaryote genes Prokaryotes DNA in cytoplasm circular chromosome naked DNA no introns Tx & Tl can occur simultaneously Eukaryotes DNA in nucleus linear chromosomes DNA wound on histone proteins introns vs. exons time & physical separation b/w Tx & Tl: ~1 hr from DNA to protein

Editor's Notes

  1. Walter Gilbert hypothesis: Maybe exons are functional units and introns make it easier for them to recombine, so as to produce new proteins with new properties through new combinations of domains. Introns give a large area for cutting genes and joining together the pieces without damaging the coding region of the gene…. patching genes together does not have to be so precise.