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Cellular Engineering
UPIIG - IPN
Author: Guillermo Garibay Benítez University: Instituto Politécnico Nacional
Mexico
 The rates of consumption or production of all
other substrates and products are based on
the empirical relation between specific
growth rate and the key-indepent variables.
 The characteristic feature is that rates of
formation or consumption of all reactants,
except the key reactant are proportional to
the key reaction rate.
 Cell metabolism is made up of hundreds of
sequential, branched and parallel biological
reactions that are normally catalysed by enzymes.
 We can assume that growth is the result of
hundreds of such enzyme-catalyzed reactions.
 The relationship between specific growth rate and
limiting substrate concentration proposed by Monod
states that:
 µ and µmax :specific and maximun specific growth rate
respectively
 S : limiting substrate concentration
 Ks : saturation constant
 When substrate concentration is not limited,
when S>>Ks numerically, Ks can be ignored
 Specific growth rate approaches umax, and
growth rate becomes independent of S and
only proportional to cell concentration.
 µ=µmax
 The dilution rate (D) describes the
relationship between the flow of medium into
the bioreactor (F) and culture volume within
the bioreactor (V):
 D=F/V
 The change on cell concentration over a
period of time, can be expressed as:
• During stationary conditions, cell
concetration remains constant, so dx/dt = 0
then:
 In stationary state, specific
growth rate is controlled by
dilution rate (D), which is an
experimental variable
 Continuos culture must be
operated ath dilution rates
below specific growth rates
 Dilution rate can be used for
controlling growth of the
cultrue
 Cell growth depends on growht limiting
subrate, therefore, growth is expressed as:
 In stationary condictions: μ = D, therefore:
 A quimiostat is operating in stationary state
which has a dilution rate of 0.30 h-1 with a
limiting substrate concentration of 0.06 mM
L-1. Determine Monod constant if the umax
for the organism is 0.25 h-1.
Constant
biomass
concentration Low glycerol
concentration
 From measurements of the residual glucose
concentration in a steady-state chemostat at various
dilution rates, you can find the following results:
 Calculate by linear regression the parameters in the
Monod Model. Are any of the data points suspect?
D (h-1) s (mg L-1)
0.13 11
0.19 14
0.23 18
0.36 38
0.67 85
0.73 513
 The outlet limiting substrate concentration is
independent of the input limiting substrate
concentration.
 At a fixed dilution rate, called the critical dilution
rate, the cell concentration drops to the constraint :
 And the limiting substrate concentration reaches
the upper constraint:
xv0 = concentración de
celulas viables inicial
 Después de esta velocidad de dilución crítica,
se dice que las células están siendo lavadas
(wash out), ya que están saliendo del
bioreactor a una velocidad mayor que el
crecimiento
 Asumiendo que el crecimiento se comporte
de acuerdo a la cinética de Monod, la
velocidad de dilución crítica se encuentra
usando la serie de condiciones de lavado:
 Then, in monod expression:
 Since Si is usually very much greater than Ks,
Dcrit is approximately equal to μmax
 Check the value of μmax increasing the dilution rate in the
chemostat to D=1.1 h-1.
 The result of the change in dilution rate is a decrease in the biomass
concentration, and during the wash-out you measure the biomass
concentration as a function of time, and obtain the following results:
 Determine μmax from this experiment
Time (h) x (g L-1)
0 5.1
0.5 4.5
1.0 3.7
2.0 2.8
3.0 2.1
4.0 1.4

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Cellular Engineering: Understanding Cell Growth and Metabolism

  • 1. Cellular Engineering UPIIG - IPN Author: Guillermo Garibay Benítez University: Instituto Politécnico Nacional Mexico
  • 2.  The rates of consumption or production of all other substrates and products are based on the empirical relation between specific growth rate and the key-indepent variables.  The characteristic feature is that rates of formation or consumption of all reactants, except the key reactant are proportional to the key reaction rate.
  • 3.
  • 4.  Cell metabolism is made up of hundreds of sequential, branched and parallel biological reactions that are normally catalysed by enzymes.  We can assume that growth is the result of hundreds of such enzyme-catalyzed reactions.
  • 5.
  • 6.  The relationship between specific growth rate and limiting substrate concentration proposed by Monod states that:  µ and µmax :specific and maximun specific growth rate respectively  S : limiting substrate concentration  Ks : saturation constant
  • 7.  When substrate concentration is not limited, when S>>Ks numerically, Ks can be ignored  Specific growth rate approaches umax, and growth rate becomes independent of S and only proportional to cell concentration.  µ=µmax
  • 8.
  • 9.  The dilution rate (D) describes the relationship between the flow of medium into the bioreactor (F) and culture volume within the bioreactor (V):  D=F/V
  • 10.  The change on cell concentration over a period of time, can be expressed as: • During stationary conditions, cell concetration remains constant, so dx/dt = 0 then:
  • 11.  In stationary state, specific growth rate is controlled by dilution rate (D), which is an experimental variable  Continuos culture must be operated ath dilution rates below specific growth rates  Dilution rate can be used for controlling growth of the cultrue
  • 12.  Cell growth depends on growht limiting subrate, therefore, growth is expressed as:  In stationary condictions: μ = D, therefore:
  • 13.  A quimiostat is operating in stationary state which has a dilution rate of 0.30 h-1 with a limiting substrate concentration of 0.06 mM L-1. Determine Monod constant if the umax for the organism is 0.25 h-1.
  • 15.  From measurements of the residual glucose concentration in a steady-state chemostat at various dilution rates, you can find the following results:  Calculate by linear regression the parameters in the Monod Model. Are any of the data points suspect? D (h-1) s (mg L-1) 0.13 11 0.19 14 0.23 18 0.36 38 0.67 85 0.73 513
  • 16.  The outlet limiting substrate concentration is independent of the input limiting substrate concentration.  At a fixed dilution rate, called the critical dilution rate, the cell concentration drops to the constraint :  And the limiting substrate concentration reaches the upper constraint: xv0 = concentración de celulas viables inicial
  • 17.  Después de esta velocidad de dilución crítica, se dice que las células están siendo lavadas (wash out), ya que están saliendo del bioreactor a una velocidad mayor que el crecimiento  Asumiendo que el crecimiento se comporte de acuerdo a la cinética de Monod, la velocidad de dilución crítica se encuentra usando la serie de condiciones de lavado:
  • 18.  Then, in monod expression:  Since Si is usually very much greater than Ks, Dcrit is approximately equal to μmax
  • 19.
  • 20.  Check the value of μmax increasing the dilution rate in the chemostat to D=1.1 h-1.  The result of the change in dilution rate is a decrease in the biomass concentration, and during the wash-out you measure the biomass concentration as a function of time, and obtain the following results:  Determine μmax from this experiment Time (h) x (g L-1) 0 5.1 0.5 4.5 1.0 3.7 2.0 2.8 3.0 2.1 4.0 1.4

Editor's Notes

  1. La velocidad específica de crecimiento de las células durante las fases de crecimiento y deceleración de un cultivo en lote, depende de la concentración de sustrato de nutrientes existentes en el medio. A menudo, un único sustrato ejerce un efecto dominante sobre la velocidad de crecimiento. Este componente se le denomina sustrato limitante de la velocidad de crecimiento o sustrato limitante del crecimiento. El sustrato limitante es a menudo, la fuente de carbono o de nitrógeno aunque en algunos casos es el oxígeno u otro oxidante como los nitratos.
  2. After a lag phase about 1 hour, there is a long exponential growht phase where the biomass concentration increases exponentially with time. When the substrate is nearly used up, growth rapidly stops, and if the culture is retained in this no growth phase, it will loose viability, cells will start to die, and the biomass concentration decreases. Since the batch cultivation starts with an initial substrate concentration s=s0 much higher than Ks, the specific growth rate µ which is the slope of the curve ln(x) versus time, is almost constant for most of the fermentation period. When finally s becomes comparable in size with Ks , the specific growth rate decreases, and the last bit of substrate is consumed with first order kinetics in s. In Monod Model, Ks, is the value of the limiting substrate concentration at which the specific growth rate is half its maximum value.