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Dr Ebin Roshan Paul
Dysmorphology and Syndrome
 Dysmorphology - study of abnormal body shape and
defects. { Dys= abnormal ; morph= shape }
 Syndrome – recognizable pattern of dysmorphic signs
that have a common cause.
Introduction
Most common genetic cause of intellectual disability.
 First described by John Langdon Down in 1866,
physician from England.
 Incidence 1 in 800 worldwide. But incidence at
conception is twice that rate , which accounts for early
pregnancy losses.
Previously called as ‘Mongolism’ not used now.
 1515 the painting “The Adoration of the Christ Child”.
Risk factors
 1. Increased maternal age : older eggs have greater risk
of improper chromosomal division ( spindle fibres
deterioration ) causing Non disjunction.
 >35 years. Risk is non linear
 2. Mothers who already have a child with DS.
 3. Parents who are carriers for translocation – can
pass it to baby. ( familial DS )
Genetics
 First described by French doctor Jerome Lejeune in 1959.
 Presence partial or complete third copy of chromosome 21.
 200-300 genes in chromosome 21 together with other epigenetic
factors produce clinical features of DS.
Trisomy 21 occurs by
 1. Non disjunction (95%)
 2. Translocation (3-4 %)
 3. Mosaicism ( 1-2 % )
 4. Partial trisomy ( <1 % )
Non disjunction
 95 % . Non familial.
 Meiotic non disjunction ( free Trisomy )
 47 chromosomes seen instead 46 { 47 ,XX/XY,+21 }
 90% maternal non disjunction and 10 % paternal non
disjunction.
 Risk increases with maternal age. Especially > 35
years.
 hghagxh
Translocation
 3-4 %
 Robertsonian translocation between 21q and other
acrocentric chromosomes ( 13,14,15,21 and 22 ).
 Can be denovo (75%) or inherited (25%) .
 25% of these cases can be due to inheritance from a
balanced translocation carrier parent. So parental
evaluation is a must, if carrier high recurrence rate.
 Usually called as “familial DS”.
Robertsonian translocation
Mosaic
 1-2 %
 the result of an early “trisomy rescue” or early
somatic non disjunction error.
 Difficult to predict DS phenotype due to variable
percentage of mosaicism in different tissues.
 Usually mildly affected.
Partial Trisomy
 Duplication of the delimited segment ( a region ) of
chromosome 21.
 Produce some extra copies but not all genes on
chromosome 21. [ 46, XY/XX, dup (21q) ]
 If duplicated part have genes which produce features
of Down syndrome they will express in Phenotype.
 Rare < 1 %
Pathophysiology
 Presence of extra genetic material causes over
expression of genes in chromosome 21 ( Dosage
Imbalance )
 Length of 21 q is 33.5 Mb and 21 p is 5-15 Mb.
 DS critical regions (DSCR) : few regions of
chromosome 21 is responsible for majority of DS
phenotype.
 Mainly within 21q22 region.
Some common genes located in
chromosome 21
 AAP ( Amyloid beta precursor protein ) implicated in
Alzheimer’s disease.
 SOD 1 ( superoxide dismutase 1 )
 DYRK1A ( Dual Specificity tyrosine – (Y)-
phosphorylation regulated kinase 1A )
 S100B ( calcium binding protein )
 DSCR 1 ( Down syndrome critical region 1 )
 LAD ( Leukocyte Adhesion Deficiency )
 KCNE 1 and 2 ( Potassium voltage gated channel )
 CBS ( Cystathionine Beta synthase )
Clinical features of DS
Brushfield spots
Reproductive function
 Women with DS are fertile
 Nearly all males with DS are infertile due to impaired
“spermatogenesis”
Hall’s criteria ( ≥ 4 /10 )
 10 cardinal signs – Bertil Hall in Clinical paediatrics.
 1. Poor Moro Reflex
 2. Hypotonia
 3. Flat facial profile
 4. Up slanting palpebral fissures
 5. Dysplastic ears
 6. Redundant loose neck skin
 7. Simian crease
 8. Hyper extensible joints
 9. Pelvis dysplasia
 10. Hypoplasia of fifth finger middle phalanx
 Preterm newborn not showing typical features of
down syndrome
Dermatoglyphics in Down
syndrome
 Digital and Palmar dermatoglyphics are considered.
No feature is alone diagnostic, because seen in
common population also.
 But when several features are there, can be an
indicative of an associated syndrome.
 1. Excess ulnar loops
 2. Radial loops mainly in 4th and 5th digit
 3. Wide ATD angle
 4. Simian crease
 5. Digital loop between the base of the index finger &
middle finger / middle finger & ring finger opening to
inter digital space.
Tri radius
 Point of convergence of 3 regions that separate almost
parallel ridges.
Radial Loop opening
Wide ATD angle and Loop
Simian and Sydney crease
 Based on PTC and DTC
 Simian – fusion of PTC and DTC
 Sydney – very long PTC which crosses the whole width
of palm. DTC appears normal.
Why Dysmorphology important ?
Genetic Tests are mainly
 1. Costly.
 2. Time consuming.
 3. Cannot be easily accessed in remote area limited
settings.
Physical examination is the most accurate initial
diagnostic tool in practise.
Diagnostic tests in DS
1. Prenatal diagnosis – screening test and invasive
diagnostic testing.
2. Post natal diagnosis.
 Why need screening ? – frequency, increased maternal
age related risk, availability of diagnostic test.
 ACOG : All pregnant women must be provided with
options of screening with less invasive method.
1 st TM screening
 Detection rate 82-87%
 1. NT scan + soft markers
 2. Maternal serum B- HCG level
 3. PAPP-A level ( Pregnancy associated Plasma protein )
Plus “Maternal age related risk”
2 nd TM screening
 “Quad screen”
 1. Maternal serum B- HCG level
 2. Unconjugated estriol
 3. AFP levels
 4. Inhibin level
Plus “maternal age related risk”
 Combining 1 and 2nd TM screening detection rate is
95 % called “ integrated screening ”
 Screening test are reported to have 5% FPR.
 Confirmation is done by Invasive testing but
miscarriage risk is 0.5 -1 %
 Chorionic Villus Sampling ( >11 weeks )and
Amniocentesis ( >16 weeks )
Karyotype analysis
 99 % accurate
 Metaphase karyotype G banding is done on fetal cells.
 Other than Trisomy 21, other aneuploidy and Balanced
translocations can be detected.
 Cost low
 4 week time needed. Time consuming.
 < 4 Mb ( sub microscopic ) deletions are missed.
SKY ( Spectral Karyotyping )
 Painting 24 chromosomes with colours.
 5 basic dyes used , mixed to produce various colours
(31colours )
 Clinical use – 1. when origin of chromosome not clear
2. helps to identify parental origin
or carrier state without screening.
Limitation : detection within same chromosome
difficult. Resolution limit is 1-2 Mb and less than 1 Mb
cannot detected.
SKY
FISH
 2 types –Interphase FISH ( simple uncultured blood)
and Metaphase FISH ( Karyotype FISH ).
 Rapid turn around ( 1 week )
 Fluorescent tagged centromere probes are used, so
signals appears as distinct dots.
 Since large number of nucleus used in Interphase
FISH mosaicism is not missed.
 <4 Mb deletions are noted.
Disadvantages of FISH
 Since Interphase chromosomes are less dense so
diffuse signals may produced.
 Translocations are missed so need karyotype
confirmation.
Interphase FISH Trisomy 21
NIPT ( Non Invasive Prenatal
testing )
 Cell free fetal DNA (cf DNA) circulating in maternal
blood is used for sequencing.
 5-10 % of total cell free DNA in maternal plasma.
 Increased during gestation age and rapid clearance
after delivery.
 Looked for aneuploidy, extra chromosomes.
 NIPT still considered as screening test and need
Invasive test for confirmation.
Post natal diagnosis
 Based on clinical features and followed by
confirmatory genetic tests.
 Physical examination is the most accurate initial
diagnostic tool in practise.
 Confirmatory test include Karyotype and FISH.
 Followed by parental testing if indicated.
 Risk assessment of next child with DS depends on
 1. Maternal age related risk
 2. Karyotype result of affected baby
 3. Parental carrier status and translocation.
Understanding Down Syndrome: Causes, Genetics, Clinical Features and Diagnosis

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Understanding Down Syndrome: Causes, Genetics, Clinical Features and Diagnosis

  • 2. Dysmorphology and Syndrome  Dysmorphology - study of abnormal body shape and defects. { Dys= abnormal ; morph= shape }  Syndrome – recognizable pattern of dysmorphic signs that have a common cause.
  • 3. Introduction Most common genetic cause of intellectual disability.  First described by John Langdon Down in 1866, physician from England.  Incidence 1 in 800 worldwide. But incidence at conception is twice that rate , which accounts for early pregnancy losses. Previously called as ‘Mongolism’ not used now.
  • 4.
  • 5.  1515 the painting “The Adoration of the Christ Child”.
  • 6. Risk factors  1. Increased maternal age : older eggs have greater risk of improper chromosomal division ( spindle fibres deterioration ) causing Non disjunction.  >35 years. Risk is non linear  2. Mothers who already have a child with DS.  3. Parents who are carriers for translocation – can pass it to baby. ( familial DS )
  • 7. Genetics  First described by French doctor Jerome Lejeune in 1959.  Presence partial or complete third copy of chromosome 21.  200-300 genes in chromosome 21 together with other epigenetic factors produce clinical features of DS. Trisomy 21 occurs by  1. Non disjunction (95%)  2. Translocation (3-4 %)  3. Mosaicism ( 1-2 % )  4. Partial trisomy ( <1 % )
  • 8. Non disjunction  95 % . Non familial.  Meiotic non disjunction ( free Trisomy )  47 chromosomes seen instead 46 { 47 ,XX/XY,+21 }  90% maternal non disjunction and 10 % paternal non disjunction.  Risk increases with maternal age. Especially > 35 years.
  • 10. Translocation  3-4 %  Robertsonian translocation between 21q and other acrocentric chromosomes ( 13,14,15,21 and 22 ).  Can be denovo (75%) or inherited (25%) .  25% of these cases can be due to inheritance from a balanced translocation carrier parent. So parental evaluation is a must, if carrier high recurrence rate.  Usually called as “familial DS”.
  • 11.
  • 13. Mosaic  1-2 %  the result of an early “trisomy rescue” or early somatic non disjunction error.  Difficult to predict DS phenotype due to variable percentage of mosaicism in different tissues.  Usually mildly affected.
  • 14. Partial Trisomy  Duplication of the delimited segment ( a region ) of chromosome 21.  Produce some extra copies but not all genes on chromosome 21. [ 46, XY/XX, dup (21q) ]  If duplicated part have genes which produce features of Down syndrome they will express in Phenotype.  Rare < 1 %
  • 15.
  • 16. Pathophysiology  Presence of extra genetic material causes over expression of genes in chromosome 21 ( Dosage Imbalance )  Length of 21 q is 33.5 Mb and 21 p is 5-15 Mb.  DS critical regions (DSCR) : few regions of chromosome 21 is responsible for majority of DS phenotype.  Mainly within 21q22 region.
  • 17. Some common genes located in chromosome 21  AAP ( Amyloid beta precursor protein ) implicated in Alzheimer’s disease.  SOD 1 ( superoxide dismutase 1 )  DYRK1A ( Dual Specificity tyrosine – (Y)- phosphorylation regulated kinase 1A )  S100B ( calcium binding protein )  DSCR 1 ( Down syndrome critical region 1 )  LAD ( Leukocyte Adhesion Deficiency )  KCNE 1 and 2 ( Potassium voltage gated channel )  CBS ( Cystathionine Beta synthase )
  • 18.
  • 20.
  • 21.
  • 22.
  • 23.
  • 24.
  • 26.
  • 27. Reproductive function  Women with DS are fertile  Nearly all males with DS are infertile due to impaired “spermatogenesis”
  • 28. Hall’s criteria ( ≥ 4 /10 )  10 cardinal signs – Bertil Hall in Clinical paediatrics.  1. Poor Moro Reflex  2. Hypotonia  3. Flat facial profile  4. Up slanting palpebral fissures  5. Dysplastic ears  6. Redundant loose neck skin  7. Simian crease  8. Hyper extensible joints  9. Pelvis dysplasia  10. Hypoplasia of fifth finger middle phalanx
  • 29.  Preterm newborn not showing typical features of down syndrome
  • 30. Dermatoglyphics in Down syndrome  Digital and Palmar dermatoglyphics are considered. No feature is alone diagnostic, because seen in common population also.  But when several features are there, can be an indicative of an associated syndrome.
  • 31.  1. Excess ulnar loops  2. Radial loops mainly in 4th and 5th digit  3. Wide ATD angle  4. Simian crease  5. Digital loop between the base of the index finger & middle finger / middle finger & ring finger opening to inter digital space.
  • 32. Tri radius  Point of convergence of 3 regions that separate almost parallel ridges.
  • 34. Wide ATD angle and Loop
  • 35. Simian and Sydney crease  Based on PTC and DTC  Simian – fusion of PTC and DTC  Sydney – very long PTC which crosses the whole width of palm. DTC appears normal.
  • 36. Why Dysmorphology important ? Genetic Tests are mainly  1. Costly.  2. Time consuming.  3. Cannot be easily accessed in remote area limited settings. Physical examination is the most accurate initial diagnostic tool in practise.
  • 37. Diagnostic tests in DS 1. Prenatal diagnosis – screening test and invasive diagnostic testing. 2. Post natal diagnosis.  Why need screening ? – frequency, increased maternal age related risk, availability of diagnostic test.  ACOG : All pregnant women must be provided with options of screening with less invasive method.
  • 38. 1 st TM screening  Detection rate 82-87%  1. NT scan + soft markers  2. Maternal serum B- HCG level  3. PAPP-A level ( Pregnancy associated Plasma protein ) Plus “Maternal age related risk”
  • 39. 2 nd TM screening  “Quad screen”  1. Maternal serum B- HCG level  2. Unconjugated estriol  3. AFP levels  4. Inhibin level Plus “maternal age related risk”
  • 40.  Combining 1 and 2nd TM screening detection rate is 95 % called “ integrated screening ”  Screening test are reported to have 5% FPR.  Confirmation is done by Invasive testing but miscarriage risk is 0.5 -1 %  Chorionic Villus Sampling ( >11 weeks )and Amniocentesis ( >16 weeks )
  • 41. Karyotype analysis  99 % accurate  Metaphase karyotype G banding is done on fetal cells.  Other than Trisomy 21, other aneuploidy and Balanced translocations can be detected.  Cost low  4 week time needed. Time consuming.  < 4 Mb ( sub microscopic ) deletions are missed.
  • 42.
  • 43.
  • 44. SKY ( Spectral Karyotyping )  Painting 24 chromosomes with colours.  5 basic dyes used , mixed to produce various colours (31colours )  Clinical use – 1. when origin of chromosome not clear 2. helps to identify parental origin or carrier state without screening. Limitation : detection within same chromosome difficult. Resolution limit is 1-2 Mb and less than 1 Mb cannot detected.
  • 45. SKY
  • 46. FISH  2 types –Interphase FISH ( simple uncultured blood) and Metaphase FISH ( Karyotype FISH ).  Rapid turn around ( 1 week )  Fluorescent tagged centromere probes are used, so signals appears as distinct dots.  Since large number of nucleus used in Interphase FISH mosaicism is not missed.  <4 Mb deletions are noted.
  • 47. Disadvantages of FISH  Since Interphase chromosomes are less dense so diffuse signals may produced.  Translocations are missed so need karyotype confirmation.
  • 49. NIPT ( Non Invasive Prenatal testing )  Cell free fetal DNA (cf DNA) circulating in maternal blood is used for sequencing.  5-10 % of total cell free DNA in maternal plasma.  Increased during gestation age and rapid clearance after delivery.  Looked for aneuploidy, extra chromosomes.  NIPT still considered as screening test and need Invasive test for confirmation.
  • 50.
  • 51. Post natal diagnosis  Based on clinical features and followed by confirmatory genetic tests.  Physical examination is the most accurate initial diagnostic tool in practise.  Confirmatory test include Karyotype and FISH.  Followed by parental testing if indicated.
  • 52.  Risk assessment of next child with DS depends on  1. Maternal age related risk  2. Karyotype result of affected baby  3. Parental carrier status and translocation.