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Chris Shillum
CHORUS and FundRef
Implementation at Elsevier
VP Product Management, Platform and Content, Elsevier
CHORUS Implementation Workshop, 28 April 2014
1
Topics
1. FundRef Taxonomy Update Workflow
2. Gathering and Validating Article Funding Info
3. Author Manuscript User Experience
2
1. FundRef Taxonomy Update
Workflow
3
Monthly Updates of FundRef Taxonomy
Funding Body
record
Funding Body
record
Funding Body
record
Funding Body
Record
Metadata captured
• URI
• Full organization name
• Synonyms
• Abbreviations
• Website URL
• Relationships (inc. Hierarchial)
with other organizations
• Contact Details
• Country
• State
• Type of organization (government,
company, foundation, etc.)
• Description of organization
Compilation
of all
Funding
Bodies into
SKOS file
Elsevier
Funder
Taxonomy
Assignment
and
Registration of
DOIs (by
CrossRef)
FundRef
Registry
Elsevier CrossRef
4
Funding Body Taxonomy Update Workflow
Gather
Candidate
Funding
Bodies
Harvest
Funding
Body
Metadata
New
Funding
Body
Record
Decline
Notification
CrossRef
Elsevier Journal
Articles
Scopus Records
Funder
Websites
• Candidates are new (non-matched)
funding bodies encountered by FundRef
participants or in Elsevier internal
workflows
Sources used:
• Funder websites,
• Ringgold
• Internal databases
• Records created for
genuinely new funding
bodies
• Duplicates may add
synonym to existing record
• If organization does not
appear genuine, decline
notice sent
5
2. Gathering and Validating
Article Funding Info
6
Manuscript Workflow Changes
Manuscript
Submission
• Author is asked to
confirm all
funding
organizations are
mentioned in the
article
• Typically in the
Acknowledgment
section
XML Creation
• Supplier tags
funding
organizations and
grant numbers in
XML file
• FundRef IDs of
“known” funding
bodies are
included in this
tagging
Proofing
• Tagged funding
information is
extracted from
XML and listed on
author query form
• Author is
requested to verify
funding
organizations are
correctly captured
7
Challenges when Capturing Funding Body Information
• Dozens of ways to misspell or abbreviate organization names
- U.S. DOE; US DOE; DOE; Department of Energy; Dept. of Energy; United States
Department of Energy
- National Institute of Health (singular) versus correct National Institutes of Health
• Duplicate abbreviations
- AAA can stand for American Accounting Association; American Anthropology
Association; American Association of Anatomists; American Academy of Audiology
• Same organization name in multiple countries
- A National Science Foundation exists in the US, Denmark, Iran, Georgia (the country),
Switzerland, etc.
• Organizations emerge, get renamed, are merged with other organizations,
create spin-offs, get split, cease to exist
- American Dietetic Association ► Academy of Nutrition and Dietetics
- Lance Armstrong Foundation ► Livestrong Foundation
• Understanding how funding is organised internationlly Requires local
expertise to assess relationships, help to translate organization names
- Natural Science Foundation of Jiangsu Province
- Jiangsu Provincial Natural Science Foundation
8
CHORUS / FundRef Development Schedule
Funder Taxonomy Workflow Article Funding Info Workflow
2008 • “Grant Warehouse” to capture funding
organizations and grants released – initially
only US organizations
• Workflow to asses funder validity and
harvest metadata created
2011 • UK, Canadian, Australian and EU
organizations added to Grant Warehouse
2013 • Asian and ROW organizations started being
added to Grant Warehouse
• SKOS Conversion Routines developed
• Monthly submission of FB taxonomy to
CrossRef started
June 2014 • New funding info tagging workflow
deployed
July 2014 • Submissions of funding info to CrossRef
as part of DOI registration to start
Q3/Q4
2014
• Capability to display of AAM in
ScienceDirect User Interface
July 2015 • First post-embargo AAM publically
available (assuming 12-month embargo)
9
2. Author Manuscript User
Experience
10
Best Available Version Logic
• Subscribed Access
• Gold OA Article
• Open Archive Article
• Non subscribed article
• CHORUS article pre
embargo
• CHORUS article post
embargo
Full text HTML VoR
Current Abstract Page
New Abstract Page with link to AAM
11
Best Available Version Logic
• Subscribed Access
• Gold OA Article
• Open Archive Article
• Non subscribed article
• CHORUS article pre
embargo
• CHORUS article post
embargo
Full text HTML VoR
Current Abstract Page
New Abstract Page with link to AAM
12
Public Access to Accepted Author Manuscript
Public access offering
differentiated from VoR,
potentially as follows:
• Page viewer format
optimised for main use
case, i.e. reading
• Without enhanced
features
recommendations/
linked references/
citations/author links
• Warnings regarding
“early versions”
• Clear option to
download final VoR
13
Testing Various User Experiences
14
www.elsevier.com
Questions?
c.shillum@elsevier.com
@cshillum

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Elsevier CHORUS Implementation Update

  • 1. 0 Chris Shillum CHORUS and FundRef Implementation at Elsevier VP Product Management, Platform and Content, Elsevier CHORUS Implementation Workshop, 28 April 2014
  • 2. 1 Topics 1. FundRef Taxonomy Update Workflow 2. Gathering and Validating Article Funding Info 3. Author Manuscript User Experience
  • 3. 2 1. FundRef Taxonomy Update Workflow
  • 4. 3 Monthly Updates of FundRef Taxonomy Funding Body record Funding Body record Funding Body record Funding Body Record Metadata captured • URI • Full organization name • Synonyms • Abbreviations • Website URL • Relationships (inc. Hierarchial) with other organizations • Contact Details • Country • State • Type of organization (government, company, foundation, etc.) • Description of organization Compilation of all Funding Bodies into SKOS file Elsevier Funder Taxonomy Assignment and Registration of DOIs (by CrossRef) FundRef Registry Elsevier CrossRef
  • 5. 4 Funding Body Taxonomy Update Workflow Gather Candidate Funding Bodies Harvest Funding Body Metadata New Funding Body Record Decline Notification CrossRef Elsevier Journal Articles Scopus Records Funder Websites • Candidates are new (non-matched) funding bodies encountered by FundRef participants or in Elsevier internal workflows Sources used: • Funder websites, • Ringgold • Internal databases • Records created for genuinely new funding bodies • Duplicates may add synonym to existing record • If organization does not appear genuine, decline notice sent
  • 6. 5 2. Gathering and Validating Article Funding Info
  • 7. 6 Manuscript Workflow Changes Manuscript Submission • Author is asked to confirm all funding organizations are mentioned in the article • Typically in the Acknowledgment section XML Creation • Supplier tags funding organizations and grant numbers in XML file • FundRef IDs of “known” funding bodies are included in this tagging Proofing • Tagged funding information is extracted from XML and listed on author query form • Author is requested to verify funding organizations are correctly captured
  • 8. 7 Challenges when Capturing Funding Body Information • Dozens of ways to misspell or abbreviate organization names - U.S. DOE; US DOE; DOE; Department of Energy; Dept. of Energy; United States Department of Energy - National Institute of Health (singular) versus correct National Institutes of Health • Duplicate abbreviations - AAA can stand for American Accounting Association; American Anthropology Association; American Association of Anatomists; American Academy of Audiology • Same organization name in multiple countries - A National Science Foundation exists in the US, Denmark, Iran, Georgia (the country), Switzerland, etc. • Organizations emerge, get renamed, are merged with other organizations, create spin-offs, get split, cease to exist - American Dietetic Association ► Academy of Nutrition and Dietetics - Lance Armstrong Foundation ► Livestrong Foundation • Understanding how funding is organised internationlly Requires local expertise to assess relationships, help to translate organization names - Natural Science Foundation of Jiangsu Province - Jiangsu Provincial Natural Science Foundation
  • 9. 8 CHORUS / FundRef Development Schedule Funder Taxonomy Workflow Article Funding Info Workflow 2008 • “Grant Warehouse” to capture funding organizations and grants released – initially only US organizations • Workflow to asses funder validity and harvest metadata created 2011 • UK, Canadian, Australian and EU organizations added to Grant Warehouse 2013 • Asian and ROW organizations started being added to Grant Warehouse • SKOS Conversion Routines developed • Monthly submission of FB taxonomy to CrossRef started June 2014 • New funding info tagging workflow deployed July 2014 • Submissions of funding info to CrossRef as part of DOI registration to start Q3/Q4 2014 • Capability to display of AAM in ScienceDirect User Interface July 2015 • First post-embargo AAM publically available (assuming 12-month embargo)
  • 10. 9 2. Author Manuscript User Experience
  • 11. 10 Best Available Version Logic • Subscribed Access • Gold OA Article • Open Archive Article • Non subscribed article • CHORUS article pre embargo • CHORUS article post embargo Full text HTML VoR Current Abstract Page New Abstract Page with link to AAM
  • 12. 11 Best Available Version Logic • Subscribed Access • Gold OA Article • Open Archive Article • Non subscribed article • CHORUS article pre embargo • CHORUS article post embargo Full text HTML VoR Current Abstract Page New Abstract Page with link to AAM
  • 13. 12 Public Access to Accepted Author Manuscript Public access offering differentiated from VoR, potentially as follows: • Page viewer format optimised for main use case, i.e. reading • Without enhanced features recommendations/ linked references/ citations/author links • Warnings regarding “early versions” • Clear option to download final VoR
  • 14. 13 Testing Various User Experiences