SlideShare a Scribd company logo
1 of 17
Analysis of Human Polyreactive
  Pneumococcal Antibodies
        Rebecca Thompson
           OCIIT 2011
Streptococcus Pneumoniae

– Gram-positive bacteria
– Colonizes the nasopharynx
– Over 90 identified
  serotypes
   • Serotypes are determined by
     capsular polysaccharide
– Antibodies against capsular
  pneumococcal polysaccharide
  (PPS) are protective
Pneumococcal Disease
– Pathogenesis
   •   Pneumonia
   •   Otitis media
   •   Meningitis
   •   Bacteremia
– High risk groups include the very young (<5 years
  old), the elderly (>65 years), the
  immunocompromised and the asplenic
– Responsible for >40,000 deaths annually in the
  United States
Natural Antibodies
– First line of defense against pneumococcal
  invasive disease
  – Also aid in the clearance of pneumococcus if an
    infection is already present
– Weakly polyreactive
– In murine studies, polyreactive antibodies are
  produced by B1 cells
– In humans, the origin and characteristics of these
  antibodies are not well characterized
Methodology
•   Draw blood from healthy young volunteers and isolate B cells
•   Single cell sort B cells into a 96 well plate
•   Expand B cells in culture
•   Test culture supernatants by ELISA
    – Identify Ig secreting B cells and PPS-binding B cells
• Harvest and lyse cells
• Make cDNA and PCR variable heavy (VH) and variable light (VL)
  immunoglobulin genes
    – Natural VH/VL pairing is maintained
    – True representation of antibody repertoire
• Ligate paired VH and VL into rhuIg expression plasmids and
  transfect human cells
• Harvest recombinant human antibodies, perform avidity
  measurements on whole and F(ab)’2 fragments
Isolation of Polyreactive Antibodies
Variable Chain Sequence Analysis
Conservation of Vk CDR3 Length
Characteristics of Amino Acids in CDR3
Polyreactive vs. PPS-specific
        Antibodies

                                                                Multiple Serotype Vk CDR3 Composition
                                               6.0



                                               5.0
                                                                                                                Polyreactive (10)




               Average number of amino acids
                                               4.0                                                              PPS3 (2)


                                                                                                                PPS6B (1)
                                               3.0

                                                                                                                PPS14 (4)

                                               2.0
                                                                                                                PPS23F (35)


                                               1.0
                                                                                                                Series6
                                               0.0
                                                     Flexible AA - RWY   Positive AA - RHK   Negative AA - DE
Polyreactive vs. PPS-specific
                            Antibodies
                                    Average CDR3 Length
                   25.0




                   20.0                                    Polyreactive


                                                           PPS3
# of amino acids




                   15.0
                                                           PPS6B


                   10.0                                    PPS14


                                                           PPS23F
                    5.0

                                                           Series6
                    0.0
                          VH CDR3                Vk CDR3
Surface Plasmon Resonance
Polyreactive Avidity

                                    Avidity to PPS14
        0.E+00

        2.E-07

        4.E-07

        6.E-07

        8.E-07
KD uM




        1.E-06

        1.E-06

        1.E-06

        2.E-06

        2.E-06
                    33G8         32E8         31B5         21B2         24F5
           IgG1   0.00000102   0.00000057   0.00000067   0.00000076   0.00000028
           IgG2   0.00000012   0.00000097   0.00000099   0.0000053    0.0000014
F(ab)’2 Fragment Avidity
Summary
• After analysis of our polyreactive antibodies, there
  are multiple features limited to this group of
  antibodies.
   – Conservation of Vk CDR3 length
   – Increased number of flexible (arginine, tyrosine and
     tryptophan) amino acids in the VH CDR3
   – Longer VH CDR3 length when compared to PPS-specific
     antibodies
• In general, the IgG1 isotype bound more avidity to
  PPS14 and PPS23F than IgG2
• When antibodies were digested into F(ab)’2
  fragments the difference in avidity between isotypes
  was largely diminished
Future Work
• Cloning of isolated PPS-specific antibodies
• Comparison of PPS binding kinetics
  – Polyreactive vs PPS-specific
Acknowledgements
• Major Advisor               • Committee Members
  – Dr. Julie Westerink, MD     –   Dr. Dignam
• Lab Members                   –   Dr. Malhotra
  – David Leggat                –   Dr. Ruch
  – Dr. Noor Khaskhely          –   Dr. Wooten


• Funding
  – NIH RO1

More Related Content

Recently uploaded

Breaking the Kubernetes Kill Chain: Host Path Mount
Breaking the Kubernetes Kill Chain: Host Path MountBreaking the Kubernetes Kill Chain: Host Path Mount
Breaking the Kubernetes Kill Chain: Host Path MountPuma Security, LLC
 
A Domino Admins Adventures (Engage 2024)
A Domino Admins Adventures (Engage 2024)A Domino Admins Adventures (Engage 2024)
A Domino Admins Adventures (Engage 2024)Gabriella Davis
 
Mastering MySQL Database Architecture: Deep Dive into MySQL Shell and MySQL R...
Mastering MySQL Database Architecture: Deep Dive into MySQL Shell and MySQL R...Mastering MySQL Database Architecture: Deep Dive into MySQL Shell and MySQL R...
Mastering MySQL Database Architecture: Deep Dive into MySQL Shell and MySQL R...Miguel Araújo
 
🐬 The future of MySQL is Postgres 🐘
🐬  The future of MySQL is Postgres   🐘🐬  The future of MySQL is Postgres   🐘
🐬 The future of MySQL is Postgres 🐘RTylerCroy
 
CNv6 Instructor Chapter 6 Quality of Service
CNv6 Instructor Chapter 6 Quality of ServiceCNv6 Instructor Chapter 6 Quality of Service
CNv6 Instructor Chapter 6 Quality of Servicegiselly40
 
08448380779 Call Girls In Greater Kailash - I Women Seeking Men
08448380779 Call Girls In Greater Kailash - I Women Seeking Men08448380779 Call Girls In Greater Kailash - I Women Seeking Men
08448380779 Call Girls In Greater Kailash - I Women Seeking MenDelhi Call girls
 
From Event to Action: Accelerate Your Decision Making with Real-Time Automation
From Event to Action: Accelerate Your Decision Making with Real-Time AutomationFrom Event to Action: Accelerate Your Decision Making with Real-Time Automation
From Event to Action: Accelerate Your Decision Making with Real-Time AutomationSafe Software
 
GenCyber Cyber Security Day Presentation
GenCyber Cyber Security Day PresentationGenCyber Cyber Security Day Presentation
GenCyber Cyber Security Day PresentationMichael W. Hawkins
 
Handwritten Text Recognition for manuscripts and early printed texts
Handwritten Text Recognition for manuscripts and early printed textsHandwritten Text Recognition for manuscripts and early printed texts
Handwritten Text Recognition for manuscripts and early printed textsMaria Levchenko
 
The Codex of Business Writing Software for Real-World Solutions 2.pptx
The Codex of Business Writing Software for Real-World Solutions 2.pptxThe Codex of Business Writing Software for Real-World Solutions 2.pptx
The Codex of Business Writing Software for Real-World Solutions 2.pptxMalak Abu Hammad
 
Slack Application Development 101 Slides
Slack Application Development 101 SlidesSlack Application Development 101 Slides
Slack Application Development 101 Slidespraypatel2
 
Injustice - Developers Among Us (SciFiDevCon 2024)
Injustice - Developers Among Us (SciFiDevCon 2024)Injustice - Developers Among Us (SciFiDevCon 2024)
Injustice - Developers Among Us (SciFiDevCon 2024)Allon Mureinik
 
WhatsApp 9892124323 ✓Call Girls In Kalyan ( Mumbai ) secure service
WhatsApp 9892124323 ✓Call Girls In Kalyan ( Mumbai ) secure serviceWhatsApp 9892124323 ✓Call Girls In Kalyan ( Mumbai ) secure service
WhatsApp 9892124323 ✓Call Girls In Kalyan ( Mumbai ) secure servicePooja Nehwal
 
Boost PC performance: How more available memory can improve productivity
Boost PC performance: How more available memory can improve productivityBoost PC performance: How more available memory can improve productivity
Boost PC performance: How more available memory can improve productivityPrincipled Technologies
 
Scaling API-first – The story of a global engineering organization
Scaling API-first – The story of a global engineering organizationScaling API-first – The story of a global engineering organization
Scaling API-first – The story of a global engineering organizationRadu Cotescu
 
04-2024-HHUG-Sales-and-Marketing-Alignment.pptx
04-2024-HHUG-Sales-and-Marketing-Alignment.pptx04-2024-HHUG-Sales-and-Marketing-Alignment.pptx
04-2024-HHUG-Sales-and-Marketing-Alignment.pptxHampshireHUG
 
08448380779 Call Girls In Friends Colony Women Seeking Men
08448380779 Call Girls In Friends Colony Women Seeking Men08448380779 Call Girls In Friends Colony Women Seeking Men
08448380779 Call Girls In Friends Colony Women Seeking MenDelhi Call girls
 
#StandardsGoals for 2024: What’s new for BISAC - Tech Forum 2024
#StandardsGoals for 2024: What’s new for BISAC - Tech Forum 2024#StandardsGoals for 2024: What’s new for BISAC - Tech Forum 2024
#StandardsGoals for 2024: What’s new for BISAC - Tech Forum 2024BookNet Canada
 
08448380779 Call Girls In Civil Lines Women Seeking Men
08448380779 Call Girls In Civil Lines Women Seeking Men08448380779 Call Girls In Civil Lines Women Seeking Men
08448380779 Call Girls In Civil Lines Women Seeking MenDelhi Call girls
 
Swan(sea) Song – personal research during my six years at Swansea ... and bey...
Swan(sea) Song – personal research during my six years at Swansea ... and bey...Swan(sea) Song – personal research during my six years at Swansea ... and bey...
Swan(sea) Song – personal research during my six years at Swansea ... and bey...Alan Dix
 

Recently uploaded (20)

Breaking the Kubernetes Kill Chain: Host Path Mount
Breaking the Kubernetes Kill Chain: Host Path MountBreaking the Kubernetes Kill Chain: Host Path Mount
Breaking the Kubernetes Kill Chain: Host Path Mount
 
A Domino Admins Adventures (Engage 2024)
A Domino Admins Adventures (Engage 2024)A Domino Admins Adventures (Engage 2024)
A Domino Admins Adventures (Engage 2024)
 
Mastering MySQL Database Architecture: Deep Dive into MySQL Shell and MySQL R...
Mastering MySQL Database Architecture: Deep Dive into MySQL Shell and MySQL R...Mastering MySQL Database Architecture: Deep Dive into MySQL Shell and MySQL R...
Mastering MySQL Database Architecture: Deep Dive into MySQL Shell and MySQL R...
 
🐬 The future of MySQL is Postgres 🐘
🐬  The future of MySQL is Postgres   🐘🐬  The future of MySQL is Postgres   🐘
🐬 The future of MySQL is Postgres 🐘
 
CNv6 Instructor Chapter 6 Quality of Service
CNv6 Instructor Chapter 6 Quality of ServiceCNv6 Instructor Chapter 6 Quality of Service
CNv6 Instructor Chapter 6 Quality of Service
 
08448380779 Call Girls In Greater Kailash - I Women Seeking Men
08448380779 Call Girls In Greater Kailash - I Women Seeking Men08448380779 Call Girls In Greater Kailash - I Women Seeking Men
08448380779 Call Girls In Greater Kailash - I Women Seeking Men
 
From Event to Action: Accelerate Your Decision Making with Real-Time Automation
From Event to Action: Accelerate Your Decision Making with Real-Time AutomationFrom Event to Action: Accelerate Your Decision Making with Real-Time Automation
From Event to Action: Accelerate Your Decision Making with Real-Time Automation
 
GenCyber Cyber Security Day Presentation
GenCyber Cyber Security Day PresentationGenCyber Cyber Security Day Presentation
GenCyber Cyber Security Day Presentation
 
Handwritten Text Recognition for manuscripts and early printed texts
Handwritten Text Recognition for manuscripts and early printed textsHandwritten Text Recognition for manuscripts and early printed texts
Handwritten Text Recognition for manuscripts and early printed texts
 
The Codex of Business Writing Software for Real-World Solutions 2.pptx
The Codex of Business Writing Software for Real-World Solutions 2.pptxThe Codex of Business Writing Software for Real-World Solutions 2.pptx
The Codex of Business Writing Software for Real-World Solutions 2.pptx
 
Slack Application Development 101 Slides
Slack Application Development 101 SlidesSlack Application Development 101 Slides
Slack Application Development 101 Slides
 
Injustice - Developers Among Us (SciFiDevCon 2024)
Injustice - Developers Among Us (SciFiDevCon 2024)Injustice - Developers Among Us (SciFiDevCon 2024)
Injustice - Developers Among Us (SciFiDevCon 2024)
 
WhatsApp 9892124323 ✓Call Girls In Kalyan ( Mumbai ) secure service
WhatsApp 9892124323 ✓Call Girls In Kalyan ( Mumbai ) secure serviceWhatsApp 9892124323 ✓Call Girls In Kalyan ( Mumbai ) secure service
WhatsApp 9892124323 ✓Call Girls In Kalyan ( Mumbai ) secure service
 
Boost PC performance: How more available memory can improve productivity
Boost PC performance: How more available memory can improve productivityBoost PC performance: How more available memory can improve productivity
Boost PC performance: How more available memory can improve productivity
 
Scaling API-first – The story of a global engineering organization
Scaling API-first – The story of a global engineering organizationScaling API-first – The story of a global engineering organization
Scaling API-first – The story of a global engineering organization
 
04-2024-HHUG-Sales-and-Marketing-Alignment.pptx
04-2024-HHUG-Sales-and-Marketing-Alignment.pptx04-2024-HHUG-Sales-and-Marketing-Alignment.pptx
04-2024-HHUG-Sales-and-Marketing-Alignment.pptx
 
08448380779 Call Girls In Friends Colony Women Seeking Men
08448380779 Call Girls In Friends Colony Women Seeking Men08448380779 Call Girls In Friends Colony Women Seeking Men
08448380779 Call Girls In Friends Colony Women Seeking Men
 
#StandardsGoals for 2024: What’s new for BISAC - Tech Forum 2024
#StandardsGoals for 2024: What’s new for BISAC - Tech Forum 2024#StandardsGoals for 2024: What’s new for BISAC - Tech Forum 2024
#StandardsGoals for 2024: What’s new for BISAC - Tech Forum 2024
 
08448380779 Call Girls In Civil Lines Women Seeking Men
08448380779 Call Girls In Civil Lines Women Seeking Men08448380779 Call Girls In Civil Lines Women Seeking Men
08448380779 Call Girls In Civil Lines Women Seeking Men
 
Swan(sea) Song – personal research during my six years at Swansea ... and bey...
Swan(sea) Song – personal research during my six years at Swansea ... and bey...Swan(sea) Song – personal research during my six years at Swansea ... and bey...
Swan(sea) Song – personal research during my six years at Swansea ... and bey...
 

Featured

2024 State of Marketing Report – by Hubspot
2024 State of Marketing Report – by Hubspot2024 State of Marketing Report – by Hubspot
2024 State of Marketing Report – by HubspotMarius Sescu
 
Everything You Need To Know About ChatGPT
Everything You Need To Know About ChatGPTEverything You Need To Know About ChatGPT
Everything You Need To Know About ChatGPTExpeed Software
 
Product Design Trends in 2024 | Teenage Engineerings
Product Design Trends in 2024 | Teenage EngineeringsProduct Design Trends in 2024 | Teenage Engineerings
Product Design Trends in 2024 | Teenage EngineeringsPixeldarts
 
How Race, Age and Gender Shape Attitudes Towards Mental Health
How Race, Age and Gender Shape Attitudes Towards Mental HealthHow Race, Age and Gender Shape Attitudes Towards Mental Health
How Race, Age and Gender Shape Attitudes Towards Mental HealthThinkNow
 
AI Trends in Creative Operations 2024 by Artwork Flow.pdf
AI Trends in Creative Operations 2024 by Artwork Flow.pdfAI Trends in Creative Operations 2024 by Artwork Flow.pdf
AI Trends in Creative Operations 2024 by Artwork Flow.pdfmarketingartwork
 
PEPSICO Presentation to CAGNY Conference Feb 2024
PEPSICO Presentation to CAGNY Conference Feb 2024PEPSICO Presentation to CAGNY Conference Feb 2024
PEPSICO Presentation to CAGNY Conference Feb 2024Neil Kimberley
 
Content Methodology: A Best Practices Report (Webinar)
Content Methodology: A Best Practices Report (Webinar)Content Methodology: A Best Practices Report (Webinar)
Content Methodology: A Best Practices Report (Webinar)contently
 
How to Prepare For a Successful Job Search for 2024
How to Prepare For a Successful Job Search for 2024How to Prepare For a Successful Job Search for 2024
How to Prepare For a Successful Job Search for 2024Albert Qian
 
Social Media Marketing Trends 2024 // The Global Indie Insights
Social Media Marketing Trends 2024 // The Global Indie InsightsSocial Media Marketing Trends 2024 // The Global Indie Insights
Social Media Marketing Trends 2024 // The Global Indie InsightsKurio // The Social Media Age(ncy)
 
Trends In Paid Search: Navigating The Digital Landscape In 2024
Trends In Paid Search: Navigating The Digital Landscape In 2024Trends In Paid Search: Navigating The Digital Landscape In 2024
Trends In Paid Search: Navigating The Digital Landscape In 2024Search Engine Journal
 
5 Public speaking tips from TED - Visualized summary
5 Public speaking tips from TED - Visualized summary5 Public speaking tips from TED - Visualized summary
5 Public speaking tips from TED - Visualized summarySpeakerHub
 
ChatGPT and the Future of Work - Clark Boyd
ChatGPT and the Future of Work - Clark Boyd ChatGPT and the Future of Work - Clark Boyd
ChatGPT and the Future of Work - Clark Boyd Clark Boyd
 
Getting into the tech field. what next
Getting into the tech field. what next Getting into the tech field. what next
Getting into the tech field. what next Tessa Mero
 
Google's Just Not That Into You: Understanding Core Updates & Search Intent
Google's Just Not That Into You: Understanding Core Updates & Search IntentGoogle's Just Not That Into You: Understanding Core Updates & Search Intent
Google's Just Not That Into You: Understanding Core Updates & Search IntentLily Ray
 
Time Management & Productivity - Best Practices
Time Management & Productivity -  Best PracticesTime Management & Productivity -  Best Practices
Time Management & Productivity - Best PracticesVit Horky
 
The six step guide to practical project management
The six step guide to practical project managementThe six step guide to practical project management
The six step guide to practical project managementMindGenius
 
Beginners Guide to TikTok for Search - Rachel Pearson - We are Tilt __ Bright...
Beginners Guide to TikTok for Search - Rachel Pearson - We are Tilt __ Bright...Beginners Guide to TikTok for Search - Rachel Pearson - We are Tilt __ Bright...
Beginners Guide to TikTok for Search - Rachel Pearson - We are Tilt __ Bright...RachelPearson36
 

Featured (20)

2024 State of Marketing Report – by Hubspot
2024 State of Marketing Report – by Hubspot2024 State of Marketing Report – by Hubspot
2024 State of Marketing Report – by Hubspot
 
Everything You Need To Know About ChatGPT
Everything You Need To Know About ChatGPTEverything You Need To Know About ChatGPT
Everything You Need To Know About ChatGPT
 
Product Design Trends in 2024 | Teenage Engineerings
Product Design Trends in 2024 | Teenage EngineeringsProduct Design Trends in 2024 | Teenage Engineerings
Product Design Trends in 2024 | Teenage Engineerings
 
How Race, Age and Gender Shape Attitudes Towards Mental Health
How Race, Age and Gender Shape Attitudes Towards Mental HealthHow Race, Age and Gender Shape Attitudes Towards Mental Health
How Race, Age and Gender Shape Attitudes Towards Mental Health
 
AI Trends in Creative Operations 2024 by Artwork Flow.pdf
AI Trends in Creative Operations 2024 by Artwork Flow.pdfAI Trends in Creative Operations 2024 by Artwork Flow.pdf
AI Trends in Creative Operations 2024 by Artwork Flow.pdf
 
Skeleton Culture Code
Skeleton Culture CodeSkeleton Culture Code
Skeleton Culture Code
 
PEPSICO Presentation to CAGNY Conference Feb 2024
PEPSICO Presentation to CAGNY Conference Feb 2024PEPSICO Presentation to CAGNY Conference Feb 2024
PEPSICO Presentation to CAGNY Conference Feb 2024
 
Content Methodology: A Best Practices Report (Webinar)
Content Methodology: A Best Practices Report (Webinar)Content Methodology: A Best Practices Report (Webinar)
Content Methodology: A Best Practices Report (Webinar)
 
How to Prepare For a Successful Job Search for 2024
How to Prepare For a Successful Job Search for 2024How to Prepare For a Successful Job Search for 2024
How to Prepare For a Successful Job Search for 2024
 
Social Media Marketing Trends 2024 // The Global Indie Insights
Social Media Marketing Trends 2024 // The Global Indie InsightsSocial Media Marketing Trends 2024 // The Global Indie Insights
Social Media Marketing Trends 2024 // The Global Indie Insights
 
Trends In Paid Search: Navigating The Digital Landscape In 2024
Trends In Paid Search: Navigating The Digital Landscape In 2024Trends In Paid Search: Navigating The Digital Landscape In 2024
Trends In Paid Search: Navigating The Digital Landscape In 2024
 
5 Public speaking tips from TED - Visualized summary
5 Public speaking tips from TED - Visualized summary5 Public speaking tips from TED - Visualized summary
5 Public speaking tips from TED - Visualized summary
 
ChatGPT and the Future of Work - Clark Boyd
ChatGPT and the Future of Work - Clark Boyd ChatGPT and the Future of Work - Clark Boyd
ChatGPT and the Future of Work - Clark Boyd
 
Getting into the tech field. what next
Getting into the tech field. what next Getting into the tech field. what next
Getting into the tech field. what next
 
Google's Just Not That Into You: Understanding Core Updates & Search Intent
Google's Just Not That Into You: Understanding Core Updates & Search IntentGoogle's Just Not That Into You: Understanding Core Updates & Search Intent
Google's Just Not That Into You: Understanding Core Updates & Search Intent
 
How to have difficult conversations
How to have difficult conversations How to have difficult conversations
How to have difficult conversations
 
Introduction to Data Science
Introduction to Data ScienceIntroduction to Data Science
Introduction to Data Science
 
Time Management & Productivity - Best Practices
Time Management & Productivity -  Best PracticesTime Management & Productivity -  Best Practices
Time Management & Productivity - Best Practices
 
The six step guide to practical project management
The six step guide to practical project managementThe six step guide to practical project management
The six step guide to practical project management
 
Beginners Guide to TikTok for Search - Rachel Pearson - We are Tilt __ Bright...
Beginners Guide to TikTok for Search - Rachel Pearson - We are Tilt __ Bright...Beginners Guide to TikTok for Search - Rachel Pearson - We are Tilt __ Bright...
Beginners Guide to TikTok for Search - Rachel Pearson - We are Tilt __ Bright...
 

Ociit 2011

  • 1. Analysis of Human Polyreactive Pneumococcal Antibodies Rebecca Thompson OCIIT 2011
  • 2. Streptococcus Pneumoniae – Gram-positive bacteria – Colonizes the nasopharynx – Over 90 identified serotypes • Serotypes are determined by capsular polysaccharide – Antibodies against capsular pneumococcal polysaccharide (PPS) are protective
  • 3. Pneumococcal Disease – Pathogenesis • Pneumonia • Otitis media • Meningitis • Bacteremia – High risk groups include the very young (<5 years old), the elderly (>65 years), the immunocompromised and the asplenic – Responsible for >40,000 deaths annually in the United States
  • 4. Natural Antibodies – First line of defense against pneumococcal invasive disease – Also aid in the clearance of pneumococcus if an infection is already present – Weakly polyreactive – In murine studies, polyreactive antibodies are produced by B1 cells – In humans, the origin and characteristics of these antibodies are not well characterized
  • 5. Methodology • Draw blood from healthy young volunteers and isolate B cells • Single cell sort B cells into a 96 well plate • Expand B cells in culture • Test culture supernatants by ELISA – Identify Ig secreting B cells and PPS-binding B cells • Harvest and lyse cells • Make cDNA and PCR variable heavy (VH) and variable light (VL) immunoglobulin genes – Natural VH/VL pairing is maintained – True representation of antibody repertoire • Ligate paired VH and VL into rhuIg expression plasmids and transfect human cells • Harvest recombinant human antibodies, perform avidity measurements on whole and F(ab)’2 fragments
  • 8. Conservation of Vk CDR3 Length
  • 9. Characteristics of Amino Acids in CDR3
  • 10. Polyreactive vs. PPS-specific Antibodies Multiple Serotype Vk CDR3 Composition 6.0 5.0 Polyreactive (10) Average number of amino acids 4.0 PPS3 (2) PPS6B (1) 3.0 PPS14 (4) 2.0 PPS23F (35) 1.0 Series6 0.0 Flexible AA - RWY Positive AA - RHK Negative AA - DE
  • 11. Polyreactive vs. PPS-specific Antibodies Average CDR3 Length 25.0 20.0 Polyreactive PPS3 # of amino acids 15.0 PPS6B 10.0 PPS14 PPS23F 5.0 Series6 0.0 VH CDR3 Vk CDR3
  • 13. Polyreactive Avidity Avidity to PPS14 0.E+00 2.E-07 4.E-07 6.E-07 8.E-07 KD uM 1.E-06 1.E-06 1.E-06 2.E-06 2.E-06 33G8 32E8 31B5 21B2 24F5 IgG1 0.00000102 0.00000057 0.00000067 0.00000076 0.00000028 IgG2 0.00000012 0.00000097 0.00000099 0.0000053 0.0000014
  • 15. Summary • After analysis of our polyreactive antibodies, there are multiple features limited to this group of antibodies. – Conservation of Vk CDR3 length – Increased number of flexible (arginine, tyrosine and tryptophan) amino acids in the VH CDR3 – Longer VH CDR3 length when compared to PPS-specific antibodies • In general, the IgG1 isotype bound more avidity to PPS14 and PPS23F than IgG2 • When antibodies were digested into F(ab)’2 fragments the difference in avidity between isotypes was largely diminished
  • 16. Future Work • Cloning of isolated PPS-specific antibodies • Comparison of PPS binding kinetics – Polyreactive vs PPS-specific
  • 17. Acknowledgements • Major Advisor • Committee Members – Dr. Julie Westerink, MD – Dr. Dignam • Lab Members – Dr. Malhotra – David Leggat – Dr. Ruch – Dr. Noor Khaskhely – Dr. Wooten • Funding – NIH RO1

Editor's Notes

  1. Our lab studies the human antibody response to Streptococcus pneumoniae Serotypes are determined by the structure of the pneumococcal capsular polysaccharide
  2. The lab’s two RO1 grants are aimed to study the elderly and HIV positive populations
  3. While our lab focuses on the specific antibody response to pneumococcal polysaccharides there are also natural antibodies
  4. Identified during screening
  5. These antibodies did not have a striking trend in gene usage. PPS-specific antibodies classically express only one or two genes. For example, reported PPS23F specific antibodies variable light chain is restricted to L6 and A23.
  6. Analysis of these polyreactive clones revealed several unique trends
  7. Went on to analyze amino acid groups that would influence binding to pneumococcal polysaccharide Greater number of flexible amino acids in the VH CDR3
  8. After observing these trends in polyreactive antibodies we wanted to compare these findings to PPS-specific antibodies Analyzed all reported human PPS-specific antibodies
  9. Went on to determine specific avidity to PPS14 and PPS23F using SPR Polyreactive clones were expressed as both IgG1 and IgG2
  10. Mention reversed y-axis Smaller number the better A specific monoclonal antibody measured a avidity of 70pM Generally, IgG1 bound both polysaccharides more avidity than IgG2
  11. Upon cleavage of the constant region, the differences between antibody avidity was no longer observed