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Presentation by,
ATHIRA R.G.
M.Sc. BIOCHEMISTRY & MOLECULAR BIOLOGY
CENTRAL UNIVERSITY OF KERALA
WHY WAS THE CONCEPT OF pH
DEVELOPED?
• By the Danish biochemist Sorensen in
1909 to test the acidity of the beer he
was making.
• PH - Pouvoir hydrogene (the power of
hydrogen).
• Water has a slight propensity to dissociate into hydroxide ions and protons.
• The acidity of the aqueous solution is usually reported using the logarithmic pH scale.
• Buffers usually maintain the pH of the extracellular fluid between 7.35-7.45.
PH values in the cell and in the extracellular fluid are kept constant within narrow limits.
• In the blood, the pH value normally ranges only between 7.35 and 7.45.
• The pH value of cytoplasm is slightly lower than that of blood at 7.0–7.3. In lysosomes pH 4.5–
5.5
• Extreme values are found in the stomach pH 2 and in the small bowel > 8.
• Since the kidney can excrete either acids or bases, depending on the state of the metabolism, the
pH of urine has a particularly wide range of variation 4.8–7.5.
• PH IS DEFINED AS THE NEGATIVE log OF THE HYDROGEN
ION CONCENTRATION.
PH= -log [H⁺]
• PH IS A MEASURE OF THE ACIDITY AND BASICITY OF A SOLUTION.
• THE PH SCALE RANGES FROM 0 TO 14.
• WHEN [H+] = [OH-] THE SOLUTION IS NEUTRAL AND PH IS 7
• WHEN [H+] > [OH-] THE SOLUTION IS ACIDIC AND PH IS LESS THAN 7
• WHEN [H+] < [OH-] THE SOLUTION IS BASIC AND PH IS MORE THAN 7
• A CHANGE IN 1 PH UNITS IS = A TEN FOLD CHANGE IN HYDROGEN ION
CONCENTRATION
THE EXTENT OF IONIZATION OF A WEAK ACID IS A
FUNCTION OF ITS ACID DISSOCIATION CONSTANT PKa
• BRONSTED AND LOWRY ACID AND BASES
• ACID DONATES PROTONS
• BASES ACCEPTS PROTONS
• STRONG ACIDS DISSOCIATE NEARLY FULLY
• [H+] = [ ACID] AND THUS PH = -log [ACID]
• WEAK ACIDS ONLY PARTIALLY DISSOCIATE
• ACIDS WITH Ka < 1 ARE CONSIDERED WEAK ACIDS
• Ka FOR ACETIC ACID IS 1.76 X 10-5 -> DIFFICULT TO WORK WITH SO INSTEAD USE log SCALE:
• PKa = -log Ka
• SO THE PKa OF ACETIC ACID IS = -LOG 1.76 X 10-5 = 4.75
• THE PH IS A MEASURE OF ACIDITY AND THE PKa IS A MEASURE OF ACID STRENGTH
HA + H 2O = H 3 O+ + HA
acid base conjugate acid conjugate base
• WHEN PKa = PH, THERE IS EQUAL CONCENTRATION OF ACID AND ITS
CONJUGATE BASE.
• PKa OF AN ACID GROUP IS DEFINED AS THE PH AT WHICH THE
PROTONATED AND UNPROTONATED SPECIES ARE PRESENT IN
EQUAL CONCENTRATIONS.
• THE EXACT PROBABILITY THAT A MOLECULE WILL BE PROTONATED OR
DEPROTONATED DEPENDS ON THE PKA OF THE MOLECULE AND THE PH OF
THE SOLUTION.
• DEPROTONATION IS THE REMOVAL OF A PROTON (H+) FROM A
MOLECULE, FORMING THE CONJUGATE BASE.
• PROTONATION IS THE ADDITION OF A PROTON (H+) TO AN
ATOM, MOLECULE, OR ION.
• THE RELATIVE ABILITY OF A MOLECULE TO GIVE UP A PROTON IS
MEASURED BY ITS PKA VALUE.
• A LOW Pka VALUE INDICATES THAT THE COMPOUND IS ACIDIC
AND WILL EASILY GIVE UP ITS PROTON TO A BASE.
• AT PH VALUES LESS(ACIDIC) THAN PKa, PROTONATED ACID FORM IS MORE ( IT WILL GIVE
OUT ITS H⁺ IONS )
• AT PH VALUES(BASIC) GREATER THAN THE PKa, DEPROTONATED BASE FORM IS MORE IN THE
SOLUTION ( IT WILL TAKE H⁺ IONS TO NEUTRALIZE THE PH AND BRING IT DOWN).
DISSOCIATION CONSTANTS AND PKa VALUES
WHY IS PH IMPORTANT IN BIOLOGY?
• PH AFFECTS SOLUBILITY OF MANY SUBSTANCES.
• PH AFFECTS STRUCTURE AND FUNCTION OF MOST PROTEINS -
INCLUDING ENZYMES.
• MANY CELLS AND ORGANISMS (ESP. PLANTS AND AQUATIC
ANIMALS) CAN ONLY SURVIVE IN A SPECIFIC PH ENVIRONMENT.
• IMPORTANT POINT -
• PH IS DEPENDENT UPON TEMPERATURE
IONIZATION OF WATER:
• PURE WATER IS NEUTRAL. BUT WHEN CHEMICALS ARE MIXED WITH WATER, THE
MIXTURE CAN BECOME EITHER ACIDIC OR BASIC
• WATER MOLECULES EXIST IN EQUILIBRIUM WITH HYDROGEN IONS AND
HYDROXIDE IONS.
H2O <--> H+ + OH-
• THE PRODUCT [H+] [OH–]—THE IONIC PRODUCT OF WATER—IS CONSTANT EVEN
WHEN ADDITIONAL ACID–BASE PAIRS ARE DISSOLVED IN THE WATER.
• AT 25 °C, PURE WATER CONTAINS H+ AND OH– AT CONCENTRATIONS OF 1 × 10–7
mol L–1 EACH;
• IT IS NEUTRAL AND HAS A PH VALUE OF EXACTLY 7.
• THE WATER EQUILIBRIUM CONSTANT IS WRITTEN AS:
Kw = [H+] [OH-]
EXPERIMENTALLY, IT HAS BEEN FOUND THAT THE CONCENTRATION
OF:
H+ = OH- = 10-7
THEREFORE: Kw = [10-7][ 10-7] = [10-14]
TITRATION
• TITRATION IS USED TO DETERMINE THE AMOUNT OF AN ACID / BASE IN A GIVEN
SOLUTION.
• A MEASURED VOLUME OF THE ACID IS TITRATED WITH A SOLUTION OF A
STRONG BASE, USUALLY SODIUM HYDROXIDE (NaOH) , OF KNOWN
CONCENTRATION.
• THE NaOH IS ADDED IN SMALL INCREMENTS UNTIL THE ACID IS CONSUMED
(NEUTRALIZED), AS DETERMINED WITH AN INDICATOR DYE OR A PH METER. THE
CONCENTRATION OF THE ACID IN THE ORIGINAL SOLUTION CAN BE
CALCULATED FROM THE VOLUME AND CONCENTRATION OF NaOH ADDED.
HENDERSON - HASSELBALCH EQUATION
PH= PKa+ log (A-)
(HA)
THE QUANTITATIVE RELATIONSHIP BETWEEN PH AND PKa IS
DESCRIBED BY THE HENDERSON- HASSELBALCH EQUATION
CONSIDER THE IONIZATION OF A WEAK ACID HA WHICH HAS SOME
PKa.
By the law of mass action:
HA H+ + A-
Rearrange to isolate the hydrogen ion
concentration
• MULTIPLY EACH SIDE WITH - log
-log [H+] =- log Ka - log [HA]
[A-]
Ie, pH= pKa – log [HA]
[ A-]
pH=pKa + log
[A-]
[HA]
IMPORTANCE
• MEASUREMENT OF PH
IS ONE OF THE MOST IMPORTANT AND FREQUENTLY USED
PROCEDURES IN BIOCHEMISTRY. THE PH
AFFECTS THE STRUCTURE AND ACTIVITY
OF BIOLOGICAL MACROMOLECULES;
1. FOR EXAMPLE, THE CATALYTIC ACTIVITY OF ENZYMES IS STRONGLY
DEPENDENT ON PH
2. MEASUREMENTS OF THE PH OF BLOOD AND URINE ARE COMMONLY USED IN
MEDICAL DIAGNOSES.
THANK YOU……….

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Ph &; henderson hesselbach equation

  • 1. Presentation by, ATHIRA R.G. M.Sc. BIOCHEMISTRY & MOLECULAR BIOLOGY CENTRAL UNIVERSITY OF KERALA
  • 2. WHY WAS THE CONCEPT OF pH DEVELOPED? • By the Danish biochemist Sorensen in 1909 to test the acidity of the beer he was making. • PH - Pouvoir hydrogene (the power of hydrogen).
  • 3. • Water has a slight propensity to dissociate into hydroxide ions and protons. • The acidity of the aqueous solution is usually reported using the logarithmic pH scale. • Buffers usually maintain the pH of the extracellular fluid between 7.35-7.45. PH values in the cell and in the extracellular fluid are kept constant within narrow limits. • In the blood, the pH value normally ranges only between 7.35 and 7.45. • The pH value of cytoplasm is slightly lower than that of blood at 7.0–7.3. In lysosomes pH 4.5– 5.5 • Extreme values are found in the stomach pH 2 and in the small bowel > 8. • Since the kidney can excrete either acids or bases, depending on the state of the metabolism, the pH of urine has a particularly wide range of variation 4.8–7.5.
  • 4. • PH IS DEFINED AS THE NEGATIVE log OF THE HYDROGEN ION CONCENTRATION. PH= -log [H⁺]
  • 5. • PH IS A MEASURE OF THE ACIDITY AND BASICITY OF A SOLUTION. • THE PH SCALE RANGES FROM 0 TO 14. • WHEN [H+] = [OH-] THE SOLUTION IS NEUTRAL AND PH IS 7 • WHEN [H+] > [OH-] THE SOLUTION IS ACIDIC AND PH IS LESS THAN 7 • WHEN [H+] < [OH-] THE SOLUTION IS BASIC AND PH IS MORE THAN 7 • A CHANGE IN 1 PH UNITS IS = A TEN FOLD CHANGE IN HYDROGEN ION CONCENTRATION
  • 6. THE EXTENT OF IONIZATION OF A WEAK ACID IS A FUNCTION OF ITS ACID DISSOCIATION CONSTANT PKa • BRONSTED AND LOWRY ACID AND BASES • ACID DONATES PROTONS • BASES ACCEPTS PROTONS • STRONG ACIDS DISSOCIATE NEARLY FULLY • [H+] = [ ACID] AND THUS PH = -log [ACID] • WEAK ACIDS ONLY PARTIALLY DISSOCIATE • ACIDS WITH Ka < 1 ARE CONSIDERED WEAK ACIDS • Ka FOR ACETIC ACID IS 1.76 X 10-5 -> DIFFICULT TO WORK WITH SO INSTEAD USE log SCALE: • PKa = -log Ka • SO THE PKa OF ACETIC ACID IS = -LOG 1.76 X 10-5 = 4.75 • THE PH IS A MEASURE OF ACIDITY AND THE PKa IS A MEASURE OF ACID STRENGTH HA + H 2O = H 3 O+ + HA acid base conjugate acid conjugate base
  • 7. • WHEN PKa = PH, THERE IS EQUAL CONCENTRATION OF ACID AND ITS CONJUGATE BASE. • PKa OF AN ACID GROUP IS DEFINED AS THE PH AT WHICH THE PROTONATED AND UNPROTONATED SPECIES ARE PRESENT IN EQUAL CONCENTRATIONS. • THE EXACT PROBABILITY THAT A MOLECULE WILL BE PROTONATED OR DEPROTONATED DEPENDS ON THE PKA OF THE MOLECULE AND THE PH OF THE SOLUTION.
  • 8. • DEPROTONATION IS THE REMOVAL OF A PROTON (H+) FROM A MOLECULE, FORMING THE CONJUGATE BASE. • PROTONATION IS THE ADDITION OF A PROTON (H+) TO AN ATOM, MOLECULE, OR ION. • THE RELATIVE ABILITY OF A MOLECULE TO GIVE UP A PROTON IS MEASURED BY ITS PKA VALUE. • A LOW Pka VALUE INDICATES THAT THE COMPOUND IS ACIDIC AND WILL EASILY GIVE UP ITS PROTON TO A BASE. • AT PH VALUES LESS(ACIDIC) THAN PKa, PROTONATED ACID FORM IS MORE ( IT WILL GIVE OUT ITS H⁺ IONS ) • AT PH VALUES(BASIC) GREATER THAN THE PKa, DEPROTONATED BASE FORM IS MORE IN THE SOLUTION ( IT WILL TAKE H⁺ IONS TO NEUTRALIZE THE PH AND BRING IT DOWN).
  • 10. WHY IS PH IMPORTANT IN BIOLOGY? • PH AFFECTS SOLUBILITY OF MANY SUBSTANCES. • PH AFFECTS STRUCTURE AND FUNCTION OF MOST PROTEINS - INCLUDING ENZYMES. • MANY CELLS AND ORGANISMS (ESP. PLANTS AND AQUATIC ANIMALS) CAN ONLY SURVIVE IN A SPECIFIC PH ENVIRONMENT. • IMPORTANT POINT - • PH IS DEPENDENT UPON TEMPERATURE
  • 11. IONIZATION OF WATER: • PURE WATER IS NEUTRAL. BUT WHEN CHEMICALS ARE MIXED WITH WATER, THE MIXTURE CAN BECOME EITHER ACIDIC OR BASIC • WATER MOLECULES EXIST IN EQUILIBRIUM WITH HYDROGEN IONS AND HYDROXIDE IONS. H2O <--> H+ + OH-
  • 12. • THE PRODUCT [H+] [OH–]—THE IONIC PRODUCT OF WATER—IS CONSTANT EVEN WHEN ADDITIONAL ACID–BASE PAIRS ARE DISSOLVED IN THE WATER. • AT 25 °C, PURE WATER CONTAINS H+ AND OH– AT CONCENTRATIONS OF 1 × 10–7 mol L–1 EACH; • IT IS NEUTRAL AND HAS A PH VALUE OF EXACTLY 7.
  • 13. • THE WATER EQUILIBRIUM CONSTANT IS WRITTEN AS: Kw = [H+] [OH-] EXPERIMENTALLY, IT HAS BEEN FOUND THAT THE CONCENTRATION OF: H+ = OH- = 10-7 THEREFORE: Kw = [10-7][ 10-7] = [10-14]
  • 14. TITRATION • TITRATION IS USED TO DETERMINE THE AMOUNT OF AN ACID / BASE IN A GIVEN SOLUTION. • A MEASURED VOLUME OF THE ACID IS TITRATED WITH A SOLUTION OF A STRONG BASE, USUALLY SODIUM HYDROXIDE (NaOH) , OF KNOWN CONCENTRATION. • THE NaOH IS ADDED IN SMALL INCREMENTS UNTIL THE ACID IS CONSUMED (NEUTRALIZED), AS DETERMINED WITH AN INDICATOR DYE OR A PH METER. THE CONCENTRATION OF THE ACID IN THE ORIGINAL SOLUTION CAN BE CALCULATED FROM THE VOLUME AND CONCENTRATION OF NaOH ADDED.
  • 15. HENDERSON - HASSELBALCH EQUATION PH= PKa+ log (A-) (HA) THE QUANTITATIVE RELATIONSHIP BETWEEN PH AND PKa IS DESCRIBED BY THE HENDERSON- HASSELBALCH EQUATION
  • 16. CONSIDER THE IONIZATION OF A WEAK ACID HA WHICH HAS SOME PKa. By the law of mass action: HA H+ + A- Rearrange to isolate the hydrogen ion concentration
  • 17. • MULTIPLY EACH SIDE WITH - log -log [H+] =- log Ka - log [HA] [A-] Ie, pH= pKa – log [HA] [ A-] pH=pKa + log [A-] [HA]
  • 18. IMPORTANCE • MEASUREMENT OF PH IS ONE OF THE MOST IMPORTANT AND FREQUENTLY USED PROCEDURES IN BIOCHEMISTRY. THE PH AFFECTS THE STRUCTURE AND ACTIVITY OF BIOLOGICAL MACROMOLECULES; 1. FOR EXAMPLE, THE CATALYTIC ACTIVITY OF ENZYMES IS STRONGLY DEPENDENT ON PH 2. MEASUREMENTS OF THE PH OF BLOOD AND URINE ARE COMMONLY USED IN MEDICAL DIAGNOSES.