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s   c   i   e   n   c   e  |   e   v   o   l   v   e   d Multiphysics Simulation of Isoelectric Point Separation of Proteins Using Non-Gel Microfluidics System Anjan Contractor, Ashwin Balasubramanian, Gareth Hughes
Mission To nurture and harvest scientific creativity  to produce life changing technologies
Discoveries ,[object Object],[object Object],[object Object],[object Object]
Current Protein Diagnostic Techniques Expensive Immobile Hard to Maintain Slow Protein Analysis -Enzyme-linked Immunosorbent Assays (ELISAs) -2D Gel Electrophoresis Protein Detection -Mass Spectrometer
Remote Area Diagnostic alqi.org  http://oregonstate.edu/dept/ncs http://www.defenseindustrydaily.com Yon M. Achieves. http://www.michaelyon-online.com
[object Object],Isoelectric Point based Protein Separation Song, Y., Hsu S., Stevens A.L., and Han J. Continuous-Flow pI-Based Sorting of Proteins and Peptides in Microfluidic Chip Using Diffusion Potential. Anal. Chem. (2006) 78(11): 3528-3536
Lynntech’s Concept: Isoelectric Point based Protein Separation Chip Top Inlet : pH, Ionic Strength, flow rate Middle Inlet: pH, Ionic Strength, flow rate Bottom Inlet: pH, Ionic Strength, flow rate L W V, Electrode Objectives: -High pH gradient at the exit of microfluidic channel. -Multiple chip configuration that can achieve pH resolution of 0.1
Design of Experiments Procedure Input parameter Selection and range Design of Experiments in JMP Check   Input design conditions of JMP in COMSOL and obtain model results ,[object Object],[object Object],[object Object],[object Object],[object Object],[object Object],Input evaluation criteria in JMP and analyze Obtain optimized parameters
Design of Experiments Plackett-Burman 12 Runs ,[object Object],[object Object]
COMSOL Model Set-up Incompressible Navier-Stokes Density=998 kg/m3 Dynamic Viscosity=1.002e-3 Pa-s Inflow Velocity Pressure 0 Pa Subdomain Setting Boundary Setting No Slip at the Wall
COMSOL Model Set-up PDMS  Fluid Average Relative Permittivity  Copper Electrode +V -V Electrostatics Subdomain Setting Boundary Setting Continuity
COMSOL Model Set-up Electrokinetics Subdomain Setting Boundary Setting
COMSOL Results pH Distribution at the Exit of the Channel  No External Potential
Statistical Optimization from COMSOL Results: Max pH p i c i f 1 = Σ (i=0,10) (c i *p i ) where  f 1 =Maximum value of  Δ pH, c i =constant, p i =parameter p i
Statistical Optimization from COMSOL Results: Uniform pH Maximum pH  Uniformity at the Channel Exit p i c i f 2 = Σ (i=0,10)(c i *p i ) where  f 2 =Maximum pH Uniformity, c i =constant, p i =parameter
COMSOL Results based on Statistical Analysis No External Potential
COMSOL Results based on Statistical Analysis No External Potential
Conclusions ,[object Object],[object Object],[object Object]
Future Work ,[object Object],[object Object],[object Object]
s   c   i   e   n   c   e  |   e   v   o   l   v   e   d 1313 Research Parkway  College Station, TX 77845 P. 979.693.0017 F. 979.694.8536 www.lynntech.com

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Lynntech

  • 1. s c i e n c e | e v o l v e d Multiphysics Simulation of Isoelectric Point Separation of Proteins Using Non-Gel Microfluidics System Anjan Contractor, Ashwin Balasubramanian, Gareth Hughes
  • 2. Mission To nurture and harvest scientific creativity to produce life changing technologies
  • 3.
  • 4. Current Protein Diagnostic Techniques Expensive Immobile Hard to Maintain Slow Protein Analysis -Enzyme-linked Immunosorbent Assays (ELISAs) -2D Gel Electrophoresis Protein Detection -Mass Spectrometer
  • 5. Remote Area Diagnostic alqi.org http://oregonstate.edu/dept/ncs http://www.defenseindustrydaily.com Yon M. Achieves. http://www.michaelyon-online.com
  • 6.
  • 7. Lynntech’s Concept: Isoelectric Point based Protein Separation Chip Top Inlet : pH, Ionic Strength, flow rate Middle Inlet: pH, Ionic Strength, flow rate Bottom Inlet: pH, Ionic Strength, flow rate L W V, Electrode Objectives: -High pH gradient at the exit of microfluidic channel. -Multiple chip configuration that can achieve pH resolution of 0.1
  • 8.
  • 9.
  • 10. COMSOL Model Set-up Incompressible Navier-Stokes Density=998 kg/m3 Dynamic Viscosity=1.002e-3 Pa-s Inflow Velocity Pressure 0 Pa Subdomain Setting Boundary Setting No Slip at the Wall
  • 11. COMSOL Model Set-up PDMS Fluid Average Relative Permittivity Copper Electrode +V -V Electrostatics Subdomain Setting Boundary Setting Continuity
  • 12. COMSOL Model Set-up Electrokinetics Subdomain Setting Boundary Setting
  • 13. COMSOL Results pH Distribution at the Exit of the Channel No External Potential
  • 14. Statistical Optimization from COMSOL Results: Max pH p i c i f 1 = Σ (i=0,10) (c i *p i ) where f 1 =Maximum value of Δ pH, c i =constant, p i =parameter p i
  • 15. Statistical Optimization from COMSOL Results: Uniform pH Maximum pH Uniformity at the Channel Exit p i c i f 2 = Σ (i=0,10)(c i *p i ) where f 2 =Maximum pH Uniformity, c i =constant, p i =parameter
  • 16. COMSOL Results based on Statistical Analysis No External Potential
  • 17. COMSOL Results based on Statistical Analysis No External Potential
  • 18.
  • 19.
  • 20. s c i e n c e | e v o l v e d 1313 Research Parkway College Station, TX 77845 P. 979.693.0017 F. 979.694.8536 www.lynntech.com