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MOLECULAR BASIS OF CANCER
Nethravathi R
GN113011
1
Cellular Basis of Cancer
• Cancer is characterized by
abnormal and uncontrolled
growth
• Cancer arises from a loss of
normal growth control
• In normal tissues, the rates of new
cell growth and old cell death are
kept in balance
• In cancer, this balance is disrupted
• This disruption can result from
1) uncontrolled cell growth or
2) loss of a cell's ability to undergo
apoptosis 2
3
Cancer Cell Do Not Grow Faster Than
Cancer Cell Do Not Grow Faster Than
Normal Cells
Normal Cells
Rather, Their Growth is Just
Rather, Their Growth is Just
Uncontrolled
Uncontrolled
What causes Cancer?
• Cancer is caused by
alterations or mutations in
the genetic code
• Can be induced in somatic
cells by:
– Carcinogenic
chemicals
– Radiation
– Some viruses
• Heredity - 5%
4
5
Hanahan and Weinberg, Cell 100: 57, 2000
Apoptosis
Oncogenes
Tumor Suppressor
Inv. and Mets
Angiogenesis
Cell cycle
• What is the molecular basis of cancer?
• Cancer is a genetic disease.
• Mutations in genes result in altered proteins
–During cell division
–External agents
–Random event
• Most cancers result from mutations in somatic
cells
• Some cancers are caused by mutations in
germline cells
6
THEORIES OF CANCER GENESIS
Standard Dogma
• Proto-oncogenes (Ras – melanoma)
• Tumor suppressor genes (p53 – various
cancers)
Modified Dogma
• Mutation in a DNA repair gene leads to the
accumulation of unrepaired mutations
(xeroderma pigmentosum)
Early-Instability Theory
• Master genes required for adequate cell
reproduction are disabled, resulting in
aneuploidy (Philadelphia chromosome) 7
8
9
10
Chromosomal changes in the genome of cancer
cells: tip of the iceberg
Terminal
Deletion
http://www.tokyo-med.ac.jp/genet/cai-e.htm
Ring
Chromosome
Robertsonian
Translocation
Deletion
Reciprocal
translocation
Isochromosomes
Insertion Inversion
Duplication
11
Nucleotide changes in the genome of cancer
cells: unseen site of the iceberg
Nucleotide
Deletions
Nucleotide
Insertions
Nucleotide
Substitutions
http://www.tokyo-med.ac.jp/genet/cai-e.h
12
• Approximately 90-95% of all cancers
are sporadic.
• 5-10% are inherited.
CANCER AND
GENETICS
13
• Oncogenes
• Tumor suppressor genes
• DNA repair genes
GENES PLAYING ROLE IN
CANCER DEVELOPMENT
14
What are the genes responsible for tumorigenic
cell growth?
Normal
Cancer
Proto-oncogenes Cell growth
and
proliferation
Tumor suppressor genes
+
-
Mutated or “activated”
oncogenes Malignant
transformation
Loss or mutation of
Tumor suppressor genes
++
ONCOGENES
• Oncogenes are mutated forms of cellular
proto-oncogenes.
• Proto-oncogenes code for cellular proteins
which regulate normal cell growth and
differentiation.
15
16
Class I: Growth Factors
Class II: Receptors for Growth Factors and
Hormones
Class III: Intracellular Signal Transducers
Class IV: Nuclear Transcription Factors
Class V: Cell-Cycle Control Proteins
Five types of proteins encoded by proto-
oncogenes participate in control of cell growth:
17
4. Nuclear
Proteins:
Transcription
Factors
5. Cell Growth
Genes
3. Cytoplasmic
Signal Transduction
Proteins
1. Secreted Growth Factors
2. Growth Factor Receptors
Functions of Cellular Proto-Oncogenes
18
A generic signalling
pathway
ONCOGENES
• proto-oncogene = ras
• Oncogene = mutated ras
• Always activated
• Always stimulating
• proliferation
19
20
amino acid position
Ras gene 12 59 61 Tumor
c-ras (H, K, N) Gly Ala Gln normal cells
H-ras Gly Ala Leu lung carcinoma
Val Ala Gln bladder carcinoma
K-ras Cys Ala Gln lung carcinoma
Arg Ala Gln lung carcinoma
Val Ala Gln colon carcinoma
N-ras Gly Ala Lys neuroblastoma
Gly Ala Arg lung carcinoma
Murine sarcoma virus
H-ras Arg Thr Gln Harvey strain
K-ras Ser Thr Gln Kirsten strain
Amino acid substitutions in Ras family proteins
(inactivates GTPase)
Activation mechanisms of proto-oncogenes
proto-oncogene --> oncogene
21
22
CHROMOSOMAL REARRANGEMENTS OR TRANSLOCATIONS
Neoplasm Translocation Proto-oncogene
Burkitt lymphoma t(8;14) 80% of cases c-myc1
t(8;22) 15% of cases
t(2;8) 5% of cases
Chronic myelogenous t(9;22) 90-95% of cases bcr-abl2
leukemia
Acute lymphocytic t(9;22) 10-15% of cases bcr-abl2
Leukemia
1
c-myc is translocated to the IgG locus, which results in its activated expression
2
bcr-abl fusion protein is produced, which results in a constitutively active abl kinase
23
GENE AMPLIFICATION
Oncogene Amplification Source of tumor
c-myc ~20-fold leukemia and lung carcinoma
N-myc 5-1,000-fold neuroblastoma
retinoblastoma
L-myc 10-20-fold small-cell lung cancer
c-abl ~5-fold chronic myoloid leukemia
c-myb 5-10-fold acute myeloid leukemia
colon carcinoma
c-erbB ~30-fold epidermoid carcinoma
K-ras 4-20-fold colon carcinoma
30-60-fold adrenocortical carcinoma
24
Oncogenes are usually dominant
(gain of function)
• cellular proto-oncogenes that have been mutated
(and “activated”)
• cellular proto-oncogenes that have been captured by
retroviruses and have been mutated in the process
(and “activated”)
• virus-specific genes that behave like cellular proto-
oncogenes that have been mutated to oncogenes (i.e.,
“activated”)
The result:
• Overproduction of growth factors
• Flooding of the cell with replication signals
• Uncontrolled stimulation in the intermediary
pathways
• Cell growth by elevated levels of transcription
factors
25
TUMOR SUPPRESSOR GENES
• LOSS OF FUNCTION
• Normal function - inhibit cell proliferation
• Absence/inactivation of inhibitor --> cancer
• Both gene copies must be defective
26
Rb gene
• Rb protein controls cell cycle moving past G1 checkpoint
• Rb protein binds regulatory transcription factor E2F
• E2F required for synthesis of replication enzymes
• E2F - Rb bound = no transcription/replication
• Growth factor --> Ras pathway --> G1Cdk-cyclin synthesized
• Active G1 Cdk-cyclin kinase phosphorylates Rb
• Phosphorylated Rb cannot bind E2F --> S phase
– Disruption/deletion of Rb gene
– Inactivation of Rb protein
--> uncontrolled cell proliferation --> cancer
27
p53
• Phosphyorylated p53 activates
transcription of p21 gene
• p21 Cdk inhibitor (binds Cdk-
cyclin complex --> inhibits
kinase activity)
• Cell cycle arrested to allow
DNA to be repaired
• If damage cannot be repaired
--> cell death (apoptosis)
• Disruption/deletion of p53 gene
• Inactivation of p53 protein
--> uncorrected DNA damage
--> uncontrolled cell proliferation
--> cancer
28
29
30
31
TUMOR SUPPRESSOR GENES
Disorders in which gene is affected
Gene (locus) Function Familial Sporadic
DCC (18q) cell surface unknown colorectal
interactions cancer
WT1 (11p) transcription Wilm’s tumor lung cancer
Rb1 (13q) transcription retinoblastoma small-cell lung
carcinoma
p53 (17p) transcription Li-Fraumeni breast, colon,
syndrome & lung cancer
BRCA1(17q) transcriptional breast cancer breast/ovarian
tumors
BRCA2 (13q) regulator/DNA repair
32
These are genes that ensure each strand of genetic
information is accurately copied during cell division of the
cell cycle.
Mutations in DNA repair genes lead to an increase in the
frequency of mutations in other genes, such as proto-
oncogenes and tumor suppressor genes.
i.e. Breast cancer susceptibility genes (BRCA1 and BRCA2)
Hereditary non-polyposis colon cancer susceptibility genes
(MSH2, MLH1, PMS1, PMS2) have DNA repair functions.
Their mutation will cause tumorigenesis.
DNA REPAIR GENES
33
Van Gent et al,
2001
Molecular
Molecular
mechanisms of
mechanisms of
DNA double
DNA double
strand break
strand break
repair
repair
BRCA1/2
34
IMPORTANCE OF DNA REPAIR
35
Hanahan & Weinberg 2000
Summary of 30 years of research (1971-2001)
36
Translocation and Bcr-Abl fusion in CML
37
Smart bullet STI-571 lockes itself to the target molecule
STI-571
38
STI-571 against Bcr-Abl
Molecular Basis of Multistep
Carcinogenesis
40
THANK YOU
41
42
43
Post mitotic
Stem cell
Differentiated Normal
senescent
differentiated
cell
Benign
tumor
Grade 2
malignancy
Grade 3 or 4
malignancy
Stem cells as the target of carcinogens
Invasion and Metastasis
• Abnormal cells proliferate
and spread (metastasize) to
other parts of the body
• Invasion - direct
migration and
penetration into
neighboring tissues
• Metastasis - cancer cells
penetrate into lymphatic
system and blood vessels
44
45
• Benign tumors
generally do not
spread by
invasion or
metastasis
• Malignant
tumors are
capable of
spreading by
invasion and
metastasis
Malignant versus Benign Tumors
46
RB RB
RB
LOH
RB
Mutation
Normal
Cells
Tumor cells
KNUDSON TWO HIT HYPOTHESIS IN SPORADIC CASES
RB RB
Inactivation of a tumor
suppressor gene
requires two somatic
mutations.
47
KNUDSON TWO HIT HYPOTHESIS IN FAMILIAL
CASES
RB rb
rb rb
RB
Familial RB (%30)
Tumor cells Normal cells
Normal cells
Inactivation of a tumor suppressor
gene requires two mutations, inherited
mutation and somatic mutation.
RB
LOH
48
CELL CYCLE
Daugther cell
Mitosis
DNA replication
Control Point
Gateway
Growth
Factors
Cell cycle
inhibitors
CELL CYCLE
S
Multiple mutations lead to colon cancer
Genetic changes --> tumor changes
49
Cellular
Tumor Progression
50
Thousands of Targets
HERCEPTIN
STI-571
?
?
?
?
?
?
?
?
?
?
?
?
?
?
?
?
?
?
THANK YOU
51

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Basics in cancer biology.pdf

  • 1. MOLECULAR BASIS OF CANCER Nethravathi R GN113011 1
  • 2. Cellular Basis of Cancer • Cancer is characterized by abnormal and uncontrolled growth • Cancer arises from a loss of normal growth control • In normal tissues, the rates of new cell growth and old cell death are kept in balance • In cancer, this balance is disrupted • This disruption can result from 1) uncontrolled cell growth or 2) loss of a cell's ability to undergo apoptosis 2
  • 3. 3 Cancer Cell Do Not Grow Faster Than Cancer Cell Do Not Grow Faster Than Normal Cells Normal Cells Rather, Their Growth is Just Rather, Their Growth is Just Uncontrolled Uncontrolled
  • 4. What causes Cancer? • Cancer is caused by alterations or mutations in the genetic code • Can be induced in somatic cells by: – Carcinogenic chemicals – Radiation – Some viruses • Heredity - 5% 4
  • 5. 5 Hanahan and Weinberg, Cell 100: 57, 2000 Apoptosis Oncogenes Tumor Suppressor Inv. and Mets Angiogenesis Cell cycle
  • 6. • What is the molecular basis of cancer? • Cancer is a genetic disease. • Mutations in genes result in altered proteins –During cell division –External agents –Random event • Most cancers result from mutations in somatic cells • Some cancers are caused by mutations in germline cells 6
  • 7. THEORIES OF CANCER GENESIS Standard Dogma • Proto-oncogenes (Ras – melanoma) • Tumor suppressor genes (p53 – various cancers) Modified Dogma • Mutation in a DNA repair gene leads to the accumulation of unrepaired mutations (xeroderma pigmentosum) Early-Instability Theory • Master genes required for adequate cell reproduction are disabled, resulting in aneuploidy (Philadelphia chromosome) 7
  • 8. 8
  • 9. 9
  • 10. 10 Chromosomal changes in the genome of cancer cells: tip of the iceberg Terminal Deletion http://www.tokyo-med.ac.jp/genet/cai-e.htm Ring Chromosome Robertsonian Translocation Deletion Reciprocal translocation Isochromosomes Insertion Inversion Duplication
  • 11. 11 Nucleotide changes in the genome of cancer cells: unseen site of the iceberg Nucleotide Deletions Nucleotide Insertions Nucleotide Substitutions http://www.tokyo-med.ac.jp/genet/cai-e.h
  • 12. 12 • Approximately 90-95% of all cancers are sporadic. • 5-10% are inherited. CANCER AND GENETICS
  • 13. 13 • Oncogenes • Tumor suppressor genes • DNA repair genes GENES PLAYING ROLE IN CANCER DEVELOPMENT
  • 14. 14 What are the genes responsible for tumorigenic cell growth? Normal Cancer Proto-oncogenes Cell growth and proliferation Tumor suppressor genes + - Mutated or “activated” oncogenes Malignant transformation Loss or mutation of Tumor suppressor genes ++
  • 15. ONCOGENES • Oncogenes are mutated forms of cellular proto-oncogenes. • Proto-oncogenes code for cellular proteins which regulate normal cell growth and differentiation. 15
  • 16. 16 Class I: Growth Factors Class II: Receptors for Growth Factors and Hormones Class III: Intracellular Signal Transducers Class IV: Nuclear Transcription Factors Class V: Cell-Cycle Control Proteins Five types of proteins encoded by proto- oncogenes participate in control of cell growth:
  • 17. 17 4. Nuclear Proteins: Transcription Factors 5. Cell Growth Genes 3. Cytoplasmic Signal Transduction Proteins 1. Secreted Growth Factors 2. Growth Factor Receptors Functions of Cellular Proto-Oncogenes
  • 19. ONCOGENES • proto-oncogene = ras • Oncogene = mutated ras • Always activated • Always stimulating • proliferation 19
  • 20. 20 amino acid position Ras gene 12 59 61 Tumor c-ras (H, K, N) Gly Ala Gln normal cells H-ras Gly Ala Leu lung carcinoma Val Ala Gln bladder carcinoma K-ras Cys Ala Gln lung carcinoma Arg Ala Gln lung carcinoma Val Ala Gln colon carcinoma N-ras Gly Ala Lys neuroblastoma Gly Ala Arg lung carcinoma Murine sarcoma virus H-ras Arg Thr Gln Harvey strain K-ras Ser Thr Gln Kirsten strain Amino acid substitutions in Ras family proteins (inactivates GTPase)
  • 21. Activation mechanisms of proto-oncogenes proto-oncogene --> oncogene 21
  • 22. 22 CHROMOSOMAL REARRANGEMENTS OR TRANSLOCATIONS Neoplasm Translocation Proto-oncogene Burkitt lymphoma t(8;14) 80% of cases c-myc1 t(8;22) 15% of cases t(2;8) 5% of cases Chronic myelogenous t(9;22) 90-95% of cases bcr-abl2 leukemia Acute lymphocytic t(9;22) 10-15% of cases bcr-abl2 Leukemia 1 c-myc is translocated to the IgG locus, which results in its activated expression 2 bcr-abl fusion protein is produced, which results in a constitutively active abl kinase
  • 23. 23 GENE AMPLIFICATION Oncogene Amplification Source of tumor c-myc ~20-fold leukemia and lung carcinoma N-myc 5-1,000-fold neuroblastoma retinoblastoma L-myc 10-20-fold small-cell lung cancer c-abl ~5-fold chronic myoloid leukemia c-myb 5-10-fold acute myeloid leukemia colon carcinoma c-erbB ~30-fold epidermoid carcinoma K-ras 4-20-fold colon carcinoma 30-60-fold adrenocortical carcinoma
  • 24. 24 Oncogenes are usually dominant (gain of function) • cellular proto-oncogenes that have been mutated (and “activated”) • cellular proto-oncogenes that have been captured by retroviruses and have been mutated in the process (and “activated”) • virus-specific genes that behave like cellular proto- oncogenes that have been mutated to oncogenes (i.e., “activated”)
  • 25. The result: • Overproduction of growth factors • Flooding of the cell with replication signals • Uncontrolled stimulation in the intermediary pathways • Cell growth by elevated levels of transcription factors 25
  • 26. TUMOR SUPPRESSOR GENES • LOSS OF FUNCTION • Normal function - inhibit cell proliferation • Absence/inactivation of inhibitor --> cancer • Both gene copies must be defective 26
  • 27. Rb gene • Rb protein controls cell cycle moving past G1 checkpoint • Rb protein binds regulatory transcription factor E2F • E2F required for synthesis of replication enzymes • E2F - Rb bound = no transcription/replication • Growth factor --> Ras pathway --> G1Cdk-cyclin synthesized • Active G1 Cdk-cyclin kinase phosphorylates Rb • Phosphorylated Rb cannot bind E2F --> S phase – Disruption/deletion of Rb gene – Inactivation of Rb protein --> uncontrolled cell proliferation --> cancer 27
  • 28. p53 • Phosphyorylated p53 activates transcription of p21 gene • p21 Cdk inhibitor (binds Cdk- cyclin complex --> inhibits kinase activity) • Cell cycle arrested to allow DNA to be repaired • If damage cannot be repaired --> cell death (apoptosis) • Disruption/deletion of p53 gene • Inactivation of p53 protein --> uncorrected DNA damage --> uncontrolled cell proliferation --> cancer 28
  • 29. 29
  • 30. 30
  • 31. 31 TUMOR SUPPRESSOR GENES Disorders in which gene is affected Gene (locus) Function Familial Sporadic DCC (18q) cell surface unknown colorectal interactions cancer WT1 (11p) transcription Wilm’s tumor lung cancer Rb1 (13q) transcription retinoblastoma small-cell lung carcinoma p53 (17p) transcription Li-Fraumeni breast, colon, syndrome & lung cancer BRCA1(17q) transcriptional breast cancer breast/ovarian tumors BRCA2 (13q) regulator/DNA repair
  • 32. 32 These are genes that ensure each strand of genetic information is accurately copied during cell division of the cell cycle. Mutations in DNA repair genes lead to an increase in the frequency of mutations in other genes, such as proto- oncogenes and tumor suppressor genes. i.e. Breast cancer susceptibility genes (BRCA1 and BRCA2) Hereditary non-polyposis colon cancer susceptibility genes (MSH2, MLH1, PMS1, PMS2) have DNA repair functions. Their mutation will cause tumorigenesis. DNA REPAIR GENES
  • 33. 33 Van Gent et al, 2001 Molecular Molecular mechanisms of mechanisms of DNA double DNA double strand break strand break repair repair BRCA1/2
  • 35. 35 Hanahan & Weinberg 2000 Summary of 30 years of research (1971-2001)
  • 37. 37 Smart bullet STI-571 lockes itself to the target molecule STI-571
  • 39. Molecular Basis of Multistep Carcinogenesis
  • 40. 40
  • 42. 42
  • 43. 43 Post mitotic Stem cell Differentiated Normal senescent differentiated cell Benign tumor Grade 2 malignancy Grade 3 or 4 malignancy Stem cells as the target of carcinogens
  • 44. Invasion and Metastasis • Abnormal cells proliferate and spread (metastasize) to other parts of the body • Invasion - direct migration and penetration into neighboring tissues • Metastasis - cancer cells penetrate into lymphatic system and blood vessels 44
  • 45. 45 • Benign tumors generally do not spread by invasion or metastasis • Malignant tumors are capable of spreading by invasion and metastasis Malignant versus Benign Tumors
  • 46. 46 RB RB RB LOH RB Mutation Normal Cells Tumor cells KNUDSON TWO HIT HYPOTHESIS IN SPORADIC CASES RB RB Inactivation of a tumor suppressor gene requires two somatic mutations.
  • 47. 47 KNUDSON TWO HIT HYPOTHESIS IN FAMILIAL CASES RB rb rb rb RB Familial RB (%30) Tumor cells Normal cells Normal cells Inactivation of a tumor suppressor gene requires two mutations, inherited mutation and somatic mutation. RB LOH
  • 48. 48 CELL CYCLE Daugther cell Mitosis DNA replication Control Point Gateway Growth Factors Cell cycle inhibitors CELL CYCLE S
  • 49. Multiple mutations lead to colon cancer Genetic changes --> tumor changes 49 Cellular Tumor Progression