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JALA & JBS Authors Workshop
How to Get Your Work Published
SLAS Official Journals
MEDLINE-Indexed, Peer Reviewed
Celebrating 20 Years of Scientific Innovation in 2015
Journal of
Laboratory Automation
Advancing Translational Laboratory
Science & Technology
Journal of
Biomolecular Screening
Advancing the Science of
Drug Discovery
JALA and JBS Readers, Authors and Reviewers…
• …are laboratory science and technology professionals who work
primarily in life sciences R&D. Together, JALA and JBS address
the full spectrum of issues that are mission-critical to this
important audience, enabling scientific research teams to gain
scientific insights, increase productivity, elevate data quality, reduce
lab process cycle times and enable experimentation that otherwise
would be impossible.
• Specifically, JALA explores ways in which scientists adapt
advancements in technology for scientific exploration and
experimentation.
• JBS reports how scientists use adapted technology to pursue new
therapeutics for unmet medical needs, including assay
development, identification of chemical probes and target
identification and validation in general.
3
Journal of Laboratory Automation (JALA)
Editor-in-Chief Chief Edward Chow, PhD
National University of Singapore
2012 Impact Factor: 1.500
Rankings:
45 out of 76 in Analytical Chemistry
65 out of 78 in Biochemical Res. Methods
Advancing Translational Laboratory
Science and Technology
Indexing
Analytical Abstracts
Biological Abstracts
BIOSIS Previews
Ceramic Abstracts
Chemical Abstracts
CINAHL
Compendex
Computer and Information
Systems Abstracts Journal
Corrosion Abstracts
EMBASE/Excerpta Medica
Engineering Index Monthly
Google Scholar
INSPEC
Journal Citation Report –
Science edition
MEDLINE
ProQuest
CSA Technology Research
Database
Science Citation Index Expanded
(Web of Science)
SciFinder
SCIRUS
Scopus
JALA Scientific Advisors
JING CHENG, PhD (Tsinghua University School of Medicine) China
NICOLAS DE ROOIJ, PhD (Ecole Polytechnique Federale de
Lausanne) Switzerland
RAYMOND DESSY, PhD (Virginia Tech) USA
DEAN HO, PhD (University of California, Los Angeles) USA
LEROY HOOD, MD, PhD (Institute for Systems Biology) USA
EDWARD MCCABE, MD, PhD (March of Dimes) USA
CHAD MIRKIN, PhD (Northwestern University) USA
EIJI OSAWA, PhD (Shinshu University NanoCarbon Research
Institute) Japan
MICHAEL PHELPS, PhD (University of California, Los Angeles) USA
CUN-YU WANG, DDS, PhD (University of California, Los Angeles) USA
JALA Editorial Board
Internationally Recognized Leaders from Nine Countries
ALPCO
AuraSense
Automated Laboratory
Processing
Brigham & Women’s
Hospital, Harvard
BRIM Biotechnology
BSSN Software
Ecole Polytechnique
Federale de Lausanne
Genefluidics
Harvard Medical School
Hospira
Johns Hopkins Univ
Merck Research
Laboratories
Nanyang Technological
Univ, Singapore
National Univ of
Singapore
North Carolina State
Univ
Peking Univ, Beijing
Pennsylvania State Univ
Pioneer Hi-Bred
PhotoniX Group
Procter & Gamble
U.S. Dept. of Agriculture
Univ of Arizona, Tucson
Univ of California, Irvine
Univ of California, Los
Angeles
Univ of California,
Riverside
Univ of California, Santa
Barbara
Univ of Copenhagen,
Denmark
Univ of Illinois, Chicago
Univ of Michigan, Ann Arbor
Univ of Texas, Dallas
Univ of Toronto
Univ of Washington,
Seattle
Univ of Wisconsin,
Madison
Advancing Translational Laboratory Science and Technology
Diagnostics and Detection
Emerging Technologies in Medicine
Laboratory Automation and Robotics
Microfluidics
Nanomedicine
Special Issues
Micro and Nanotechnologies for
Quantitative Biology and Medicine
High-Throughput Imaging Technologies
Advancing Scientific Innovation with
Acoustic Droplet Ejection
New Developments in Biosensing
Technologies
Microengineered Cell- and Tissue-Based
Assays for Drug Screening and
Toxicology Applications
New Developments in Global Health
Technologies
Advancements in Biomedical Micro/Nano
Tools & Technology
Novel Drug Development and Delivery
Robotics for Laboratory Automation
Next Generation Microarrays
Nanomaterials and Microfluidics
Nanomedicine
Biosecurity and Biosafety
Food and Agriculture
Bionanotechnology
Mammalian Cells and Automation
Programming Languages and Automation
Chemical Process Research and
Development
Information Technology and Informatics
Automation in Academics
Automation and Cellular Immunology
Similar Journals
Journal of Biomolecular Screening (JBS)
Editor-in-Chief Robert M. Campbell, PhD, Eli Lilly & Company,
Indianapolis, IN
2012 Impact Factor: 2.012
Rankings:
37 out of 76 in Analytical Chemistry
85 out of 165 in Biotechnology and
Applied Microbiology
49 out of 78 in Biochemical Res. Methods
Advancing the Science of Drug Discovery
Indexing
Biomolecular Interaction
Network Database (BIND)
BIOSIS database
BIOSIS Previews
Biotechnology Citation Index
Chemical Abstracts
Current Contents: Life Sciences
Elsevier BIOBASE/Current
Awareness in Biological
Sciences
EMBASE/Excerpta Medica
EMBiology
Index Medicus
InfoTrac (full text)
MEDLINE
Prous Science Integrity
Science Citation Index Expanded
(Web of Science)
Scopus
JBS Editorial Board
Internationally Recognized Leaders from Eight Countries
Albert-Ludwigs-Universitat
Freiburg
AstraZeneca
Chinese Academy of Sciences
Eli Lilly & Company
Glasgow University
GlaxoSmithKline
Institut Pasteur Korea
Johnson & Johnson
Lankenau Institute for Medical
Research
U.S. National Institutes of Health
Chemical Genomics Center
Max Planck Institute
N8 Research Partnership
Novartis Institutes for BioMedical
Research
Novartis Pharma
PharmaMar
Promega
Protagonist Therapeutics
Sanofi Aventis
Threshold Pharmaceuticals
University of Toronto
US Environmental Protection
Agency
Venenum Biodesign
WuXi AppTec
Advancing the Science of Drug Discovery
ADME/Tox
Assay Data Analysis, Statistics
Compound Management
Epigenetics
Flow Cytometry (FACS)-Based
Screening Methods
HCS, Imaging, Data Analysis
HTS Methods
HTS Reviews
NMR, Mass Spectrometry-Based
Screening
Special Issues
Novel Targets and Screening
Approaches for Neurodegenerative
Diseases
Advances in Mass Spectrometry
within Drug Discovery
Screening by RNAi and Precise
Genome Editing Technologies
Therapeutic Antibody Discovery and
Development
Novel Therapeutic Approaches for
Neglected Infectious Diseases
Knowledge from Small-Molecule
Screening & Profiling Data
Phenotypic Drug Discovery
Stem Cells in Drug Discovery
Epigenetic-Targeted Drug Discovery
High Content Screening, Imaging and
Data Analysis
Compound Management
Similar Journals
How to Get Published
Planning ahead
• Paper writing starts before all experiments are finished
• When experiments start telling a story: make an outline
– Summarize the message of your paper in one sentence
– Write down the findings leading to the main conclusion
– Make draft figures (missing data is a blank figure)
Helps focus experimental work
Writing the First Draft
Central Message
• What is the main message of your paper?
• What are the key takeaway points of your paper?
• Think of the logical flow of the data
Choosing the Right Journal
• Choose the right audience
• Be realistic about the impact/significance of your paper
• Impact factor vs. best audience/category
Manuscript Composition – Enhance the Readability
• Title
• Abstract
• Introduction
• Methods
• Results
• Discussion
• References/Citations
Title
• What is the most important message of your paper?
• The message is more than just the data
• Capture the audience’s imagination
Cellular-Level Surgery Using Nano Robots (JALA, Dec. 2012)
• Be Clear
Bad Example: Treatment of Pediatric Melanoma Patients with
Lasers
Better Example: Laser Treatment of Pediatric Melanoma Patients
• Follow journal rules for title length and format
Abstract
• Establish the narrative of your paper
• Convince the editors, reviewers and
audience to want to read your paper
• Should be able to stand on its own
without reading the paper
• State the hypothesis, question or
objective of the study
• Complete the story by answering
the hypothesis, question or objective
• How does this work impact your
field of research and the larger
scientific/medical/commercial
industry?
• Stay consistent with title and
introduction in the use of keywords
and concepts
• Follow the correct style and format
• Follow order of the manuscript
(Intro-Methods-Results-Discussion)
• Stay within the allowed word count
• Do not include data that isn’t in the
paper
• Do not suggest conclusions that
can’t be supported by the data in the
paper
• Limit abbreviations to a minimum
• No references and no figure or table
citations
Introduction
• Why was this study conducted?
• Sufficiently introduce the current state of research without
becoming a review paper
• Recognize key works that came before yours
• Be clear about how your work is different from what’s previously
been published
– What did you do differently?
– What is novel?
– Concisely reiterate and summarize the key talking points/data/ideas
that you will demonstrate in the paper and that are emphasized in
the abstract
• What is the main conclusion of your data
Methods
• Effectively describe how studies were performed
• Explain techniques in sufficient detail so that an expert in your
field could effectively replicate your work
• Be clear about your source for materials
• Describe statistics and techniques employed
• If your studies involve living subjects, describe ethical and
regulatory considerations of the study
Results
• Order your Results and figures in a clear and sensible manner
that fits your narrative
• Subheadings of your Results should tell the conclusion of the
subsection
• In each subsection, start by clearly stating why these
experiments are important
• Make clear transitions from one point to another (“because this
result was due to either A or B, we did …”
• In each paragraph, start from more general considerations to
more specific information
• State conclusions in the Result section!
• Provide enough data to convince the audience of your
conclusions
• State your results clearly without embellishments or
overreaching conclusions
Discussion: This is your narrative!
• Explain why your work is important. What conclusions do you
take from your Results that advance what is known in your field
of research?
• Do not just summarize your Results. Answer bigger questions.
• Do not be afraid to talk about the limitations of your work
• How does your current work indicate where future research
should go?
Drafting
Writing is an iterative process
Revising
Planning
Authorship Issues
Authorship Order
• Which graduate student/postdoc/tech did the most work/led the project?
• Co-first author is fine
• Lead PI should go last
• Gamesmanship: Do you have collaborators that helped with your project
that can add legitimacy to your work?
Corresponding Authorship
• The lead PI should generally be Corresponding Author. In cases of multi-
disciplinary studies, can have two Corresponding Authors.
• Situation-specific cases for making postdoctoral fellow Corresponding
Author
Authorship Permissions
• Does everyone on the authorship list know they are associated with your
paper?
Importance of Citations
• Ideas are the currency of academia
• Failure to cite violates the rights of the person who originated
the idea
• Academics need to trace the genealogy of ideas
Originality of Research
• How does your work differentiate from work that came before it?
• What novel insights or conclusions can you make from your
work?
Evaluation of Originality by Peer Reviewers
• How does your work compare to the work cited in your paper?
• How does your work compare to work that you failed to cite
(This can kill your paper)
Description of Originality in Manuscript
• Create and maintain a narrative that easily explains why and
how your work is novel
• Differentiate your work from properly cited work that came
before yours. Show how your work extends beyond what is
known
The Review Process
• The review process is confidential, and reviewers are obliged
not to discuss papers or authors with anyone outside of the
SLAS editorial staff.
• Manuscripts are typically evaluated in response to stated Peer
Review Guidelines and initial feedback is usually provided to
authors within four weeks after submission.
• Manuscripts can be accepted as written by reviewers, declined
as inappropriate, or as is more often the case, reviewers will
suggest revisions in the SLAS Spirit of Mentorship.
• Authors are offered the opportunity to revise and re-submit their
manuscripts, or provide explanations in response to reviewer
questions or suggestions.
• Revisions and responses are re-reviewed by the editor-in-chief
and/or peer reviewers before final publishing decisions are
made.
• Invited reviewers are asked to decline their invitation if they have
any perceived conflict of interest with the author, the author's
affiliation and/or the topic of the paper.
Reviewer Guidelines (available at www.slas.org)
Four Primary Areas of Evaluation
• Content
• Presentation
• Ethics
• General
Content
• Is the manuscript within the defined scope of the journal?
• Is the subject of the paper of sufficient interest to the journal's
readership?
• Does the paper report a specific, identifiable, advance in
knowledge?
• Has the work reported in this paper been published before?
(Suggestion: search MEDLINE and/or Google Scholar by author
and keywords.)
• Are the title and abstract truly descriptive of the content?
• Are the procedures and methods complete and sufficiently clear
that the work could be repeated by anyone knowledgeable in the
field?
• Are the conclusions justified, sound and logically consistent?
• Are the references to prior work pertinent and complete?
Presentation
• Is the paper as concise as it could be; consistent with clarity?
• Are all figures and tables relevant and properly prepared?
• Reviewers are not required to comment on grammar and
punctuation. Instead, reviewers are encouraged to suggest
changes that would remove ambiguity or clarify meaning.
Ethics
• Papers under review are confidential and should not be
discussed or shown to others without the express permission of
the editor-in-chief.
• The identity of reviewers is kept anonymous. A reviewer should
reveal his or her identify to an author only with permission from
the editor-in-chief.
General
• Ensure the appropriate manuscript category is selected by the
author. If you do not think the category selected by the author is
the best fit for the manuscript, recommend a more appropriate
category.
• Ensure the author is following the journal's Instruction for
Authors and American Chemistry Society (ACS) Style
Guidelines.
• Assessments should be returned on or before the specified
deadline. Reviewers who may not be able to meet a deadline
are urged to say so as soon as possible.
• Please keep in mind that reviewer manuscript evaluations and
comments will be relayed to authors as guides for revision. Be
honest, but courteous. Offer constructive criticism to the authors
so they can benefit from your expertise. Critique the manuscript,
not the author.
• Any comments for the editor's eyes only should be shared in a
separate note.
Permission Guidelines
• Any text, tables, or figures reproduced from previously published
work can only be reprinted with written permission from the
copyright holder.
• Permissions must be submitted with the manuscript, and must
include print and online publication.
• Acquiring permission is the sole responsibility of the author.
• The publication from which the material is taken must be
listed in the references.
Copyright and Simultaneous Submissions
• Manuscripts are considered for publication with the understanding that if a
paper is accepted, copyright is transferred to SLAS, and that no paper
presenting the same information has been or will be published elsewhere.
• If part of a contribution has appeared or will appear elsewhere, the author
must specify the details in the comments portion of the submission.
• Simultaneous submissions of manuscripts to multiple journals at the same
time is not acceptable — please do not submit manuscripts that may be
under consideration by another publication or electronic medium.
• JALA and JBS content becomes open access one year after final (print)
publication. JALA and JBS offer an immediate open access option for a fee.
JALA & JBS Copyright/Licensing Specifics
• Authors retain copyright of their your work
• The author may do whatever they wish with the version of the article
they submitted to the journal (version 1).
• Once the article has been accepted for publication, the author may
post the accepted version (version 2) of the article on their own
personal website, department’s website or the repository at the
author’s institution without any restrictions.
• Authors may use the published article (version 3) for their own
teaching needs or to supply on an individual basis to research
colleagues, provided that such supply is not for commercial
purposes.
• Authors may use the published article (version 3) in books they
write or edit any time after publication in the journal.
• When posting or re-using an article, authors must provide a link to
the appropriate DOI for the published version of the article at JALA
or JBS Online.
• Authors are responsible for fulfilling whatever obligations they
may have to funding agencies (e.g. NIH, Wellcome Trust,
RCUK). Links to helpful information are available at
www.slas.org.
• Authors may not post the accepted version (version 2) of the
article in any repository until 12 months after final (print)
publication.
• Authors may not use the published article (version 3) for
commercial purposes or widespread dissemination.
• Authors may not post the published article (version 3) on a
website or in a repository without permission from SAGE.
Publishing Ethics
Definition of Plagiarism
• From Merriam-Webster Dictionary: to steal and pass off (the ideas
or words of another) as one's own : use (another's production)
without crediting the source
Typical Responses to Plagiarism
• Author will be given an opportunity to explain themselves
• During review process – failure to be accepted
• After publication – retraction
Conflicts of Interest
• All prospective authors must recognize and disclose any conflict of
interest, or potential conflict of interest, that may bias their work, or
could be perceived to bias their work, and acknowledge all financial
support and any other personal connections.
• JALA follows the Uniform Requirements for Manuscripts of the
International Committee of Medical Journal Editors, especially as
they relate to conflicts of interest.
Scientific Misconduct
• Any action that involves purposeful manipulation of the scientific
record such that it no longer reflects observed truth. Negligence
and deceit. Such as:
– Fabrication of data
– Falsification of data
– Plagiarism
– Unethical treatment of research subjects
• If SLAS suspects misconduct by authors, reviewers, editorial
staff, or other editors, it will take action. This duty extends to
both published and unpublished papers.
Advice for Published Authors: PROMOTE!
You can increase citations of your paper.
Social media and other tactics are easy and free.
Read the article Advice for Published Authors: Now is Not the
Time to be Shy in the SLAS Electronic Laboratory
Neighborhood e-zine at www.eln.slas.org.
Tips and Resources at SLAS.org
• Rollover “Publications” in menu bar at top of homepage
• Select “Scientific Journals” in dropdown menu
• www.slas.org/publications/scientific-journals

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SLAS2015 JALA & JBS Author Workshop: How to Get Your Work Published

  • 1. JALA & JBS Authors Workshop How to Get Your Work Published
  • 2. SLAS Official Journals MEDLINE-Indexed, Peer Reviewed Celebrating 20 Years of Scientific Innovation in 2015 Journal of Laboratory Automation Advancing Translational Laboratory Science & Technology Journal of Biomolecular Screening Advancing the Science of Drug Discovery
  • 3. JALA and JBS Readers, Authors and Reviewers… • …are laboratory science and technology professionals who work primarily in life sciences R&D. Together, JALA and JBS address the full spectrum of issues that are mission-critical to this important audience, enabling scientific research teams to gain scientific insights, increase productivity, elevate data quality, reduce lab process cycle times and enable experimentation that otherwise would be impossible. • Specifically, JALA explores ways in which scientists adapt advancements in technology for scientific exploration and experimentation. • JBS reports how scientists use adapted technology to pursue new therapeutics for unmet medical needs, including assay development, identification of chemical probes and target identification and validation in general. 3
  • 4. Journal of Laboratory Automation (JALA) Editor-in-Chief Chief Edward Chow, PhD National University of Singapore 2012 Impact Factor: 1.500 Rankings: 45 out of 76 in Analytical Chemistry 65 out of 78 in Biochemical Res. Methods Advancing Translational Laboratory Science and Technology
  • 5. Indexing Analytical Abstracts Biological Abstracts BIOSIS Previews Ceramic Abstracts Chemical Abstracts CINAHL Compendex Computer and Information Systems Abstracts Journal Corrosion Abstracts EMBASE/Excerpta Medica Engineering Index Monthly Google Scholar INSPEC Journal Citation Report – Science edition MEDLINE ProQuest CSA Technology Research Database Science Citation Index Expanded (Web of Science) SciFinder SCIRUS Scopus
  • 6. JALA Scientific Advisors JING CHENG, PhD (Tsinghua University School of Medicine) China NICOLAS DE ROOIJ, PhD (Ecole Polytechnique Federale de Lausanne) Switzerland RAYMOND DESSY, PhD (Virginia Tech) USA DEAN HO, PhD (University of California, Los Angeles) USA LEROY HOOD, MD, PhD (Institute for Systems Biology) USA EDWARD MCCABE, MD, PhD (March of Dimes) USA CHAD MIRKIN, PhD (Northwestern University) USA EIJI OSAWA, PhD (Shinshu University NanoCarbon Research Institute) Japan MICHAEL PHELPS, PhD (University of California, Los Angeles) USA CUN-YU WANG, DDS, PhD (University of California, Los Angeles) USA
  • 7. JALA Editorial Board Internationally Recognized Leaders from Nine Countries ALPCO AuraSense Automated Laboratory Processing Brigham & Women’s Hospital, Harvard BRIM Biotechnology BSSN Software Ecole Polytechnique Federale de Lausanne Genefluidics Harvard Medical School Hospira Johns Hopkins Univ Merck Research Laboratories Nanyang Technological Univ, Singapore National Univ of Singapore North Carolina State Univ Peking Univ, Beijing Pennsylvania State Univ Pioneer Hi-Bred PhotoniX Group Procter & Gamble U.S. Dept. of Agriculture Univ of Arizona, Tucson Univ of California, Irvine Univ of California, Los Angeles Univ of California, Riverside Univ of California, Santa Barbara Univ of Copenhagen, Denmark Univ of Illinois, Chicago Univ of Michigan, Ann Arbor Univ of Texas, Dallas Univ of Toronto Univ of Washington, Seattle Univ of Wisconsin, Madison
  • 8. Advancing Translational Laboratory Science and Technology Diagnostics and Detection Emerging Technologies in Medicine Laboratory Automation and Robotics Microfluidics Nanomedicine Special Issues Micro and Nanotechnologies for Quantitative Biology and Medicine High-Throughput Imaging Technologies Advancing Scientific Innovation with Acoustic Droplet Ejection New Developments in Biosensing Technologies Microengineered Cell- and Tissue-Based Assays for Drug Screening and Toxicology Applications New Developments in Global Health Technologies Advancements in Biomedical Micro/Nano Tools & Technology Novel Drug Development and Delivery Robotics for Laboratory Automation Next Generation Microarrays Nanomaterials and Microfluidics Nanomedicine Biosecurity and Biosafety Food and Agriculture Bionanotechnology Mammalian Cells and Automation Programming Languages and Automation Chemical Process Research and Development Information Technology and Informatics Automation in Academics Automation and Cellular Immunology
  • 10. Journal of Biomolecular Screening (JBS) Editor-in-Chief Robert M. Campbell, PhD, Eli Lilly & Company, Indianapolis, IN 2012 Impact Factor: 2.012 Rankings: 37 out of 76 in Analytical Chemistry 85 out of 165 in Biotechnology and Applied Microbiology 49 out of 78 in Biochemical Res. Methods Advancing the Science of Drug Discovery
  • 11. Indexing Biomolecular Interaction Network Database (BIND) BIOSIS database BIOSIS Previews Biotechnology Citation Index Chemical Abstracts Current Contents: Life Sciences Elsevier BIOBASE/Current Awareness in Biological Sciences EMBASE/Excerpta Medica EMBiology Index Medicus InfoTrac (full text) MEDLINE Prous Science Integrity Science Citation Index Expanded (Web of Science) Scopus
  • 12. JBS Editorial Board Internationally Recognized Leaders from Eight Countries Albert-Ludwigs-Universitat Freiburg AstraZeneca Chinese Academy of Sciences Eli Lilly & Company Glasgow University GlaxoSmithKline Institut Pasteur Korea Johnson & Johnson Lankenau Institute for Medical Research U.S. National Institutes of Health Chemical Genomics Center Max Planck Institute N8 Research Partnership Novartis Institutes for BioMedical Research Novartis Pharma PharmaMar Promega Protagonist Therapeutics Sanofi Aventis Threshold Pharmaceuticals University of Toronto US Environmental Protection Agency Venenum Biodesign WuXi AppTec
  • 13. Advancing the Science of Drug Discovery ADME/Tox Assay Data Analysis, Statistics Compound Management Epigenetics Flow Cytometry (FACS)-Based Screening Methods HCS, Imaging, Data Analysis HTS Methods HTS Reviews NMR, Mass Spectrometry-Based Screening Special Issues Novel Targets and Screening Approaches for Neurodegenerative Diseases Advances in Mass Spectrometry within Drug Discovery Screening by RNAi and Precise Genome Editing Technologies Therapeutic Antibody Discovery and Development Novel Therapeutic Approaches for Neglected Infectious Diseases Knowledge from Small-Molecule Screening & Profiling Data Phenotypic Drug Discovery Stem Cells in Drug Discovery Epigenetic-Targeted Drug Discovery High Content Screening, Imaging and Data Analysis Compound Management
  • 15. How to Get Published Planning ahead • Paper writing starts before all experiments are finished • When experiments start telling a story: make an outline – Summarize the message of your paper in one sentence – Write down the findings leading to the main conclusion – Make draft figures (missing data is a blank figure) Helps focus experimental work
  • 16. Writing the First Draft Central Message • What is the main message of your paper? • What are the key takeaway points of your paper? • Think of the logical flow of the data Choosing the Right Journal • Choose the right audience • Be realistic about the impact/significance of your paper • Impact factor vs. best audience/category
  • 17. Manuscript Composition – Enhance the Readability • Title • Abstract • Introduction • Methods • Results • Discussion • References/Citations
  • 18. Title • What is the most important message of your paper? • The message is more than just the data • Capture the audience’s imagination Cellular-Level Surgery Using Nano Robots (JALA, Dec. 2012) • Be Clear Bad Example: Treatment of Pediatric Melanoma Patients with Lasers Better Example: Laser Treatment of Pediatric Melanoma Patients • Follow journal rules for title length and format
  • 19. Abstract • Establish the narrative of your paper • Convince the editors, reviewers and audience to want to read your paper • Should be able to stand on its own without reading the paper • State the hypothesis, question or objective of the study • Complete the story by answering the hypothesis, question or objective • How does this work impact your field of research and the larger scientific/medical/commercial industry? • Stay consistent with title and introduction in the use of keywords and concepts • Follow the correct style and format • Follow order of the manuscript (Intro-Methods-Results-Discussion) • Stay within the allowed word count • Do not include data that isn’t in the paper • Do not suggest conclusions that can’t be supported by the data in the paper • Limit abbreviations to a minimum • No references and no figure or table citations
  • 20. Introduction • Why was this study conducted? • Sufficiently introduce the current state of research without becoming a review paper • Recognize key works that came before yours • Be clear about how your work is different from what’s previously been published – What did you do differently? – What is novel? – Concisely reiterate and summarize the key talking points/data/ideas that you will demonstrate in the paper and that are emphasized in the abstract • What is the main conclusion of your data
  • 21. Methods • Effectively describe how studies were performed • Explain techniques in sufficient detail so that an expert in your field could effectively replicate your work • Be clear about your source for materials • Describe statistics and techniques employed • If your studies involve living subjects, describe ethical and regulatory considerations of the study
  • 22. Results • Order your Results and figures in a clear and sensible manner that fits your narrative • Subheadings of your Results should tell the conclusion of the subsection • In each subsection, start by clearly stating why these experiments are important • Make clear transitions from one point to another (“because this result was due to either A or B, we did …” • In each paragraph, start from more general considerations to more specific information • State conclusions in the Result section! • Provide enough data to convince the audience of your conclusions • State your results clearly without embellishments or overreaching conclusions
  • 23. Discussion: This is your narrative! • Explain why your work is important. What conclusions do you take from your Results that advance what is known in your field of research? • Do not just summarize your Results. Answer bigger questions. • Do not be afraid to talk about the limitations of your work • How does your current work indicate where future research should go?
  • 24. Drafting Writing is an iterative process Revising Planning
  • 25. Authorship Issues Authorship Order • Which graduate student/postdoc/tech did the most work/led the project? • Co-first author is fine • Lead PI should go last • Gamesmanship: Do you have collaborators that helped with your project that can add legitimacy to your work? Corresponding Authorship • The lead PI should generally be Corresponding Author. In cases of multi- disciplinary studies, can have two Corresponding Authors. • Situation-specific cases for making postdoctoral fellow Corresponding Author Authorship Permissions • Does everyone on the authorship list know they are associated with your paper?
  • 26. Importance of Citations • Ideas are the currency of academia • Failure to cite violates the rights of the person who originated the idea • Academics need to trace the genealogy of ideas Originality of Research • How does your work differentiate from work that came before it? • What novel insights or conclusions can you make from your work?
  • 27. Evaluation of Originality by Peer Reviewers • How does your work compare to the work cited in your paper? • How does your work compare to work that you failed to cite (This can kill your paper) Description of Originality in Manuscript • Create and maintain a narrative that easily explains why and how your work is novel • Differentiate your work from properly cited work that came before yours. Show how your work extends beyond what is known
  • 28. The Review Process • The review process is confidential, and reviewers are obliged not to discuss papers or authors with anyone outside of the SLAS editorial staff. • Manuscripts are typically evaluated in response to stated Peer Review Guidelines and initial feedback is usually provided to authors within four weeks after submission. • Manuscripts can be accepted as written by reviewers, declined as inappropriate, or as is more often the case, reviewers will suggest revisions in the SLAS Spirit of Mentorship.
  • 29. • Authors are offered the opportunity to revise and re-submit their manuscripts, or provide explanations in response to reviewer questions or suggestions. • Revisions and responses are re-reviewed by the editor-in-chief and/or peer reviewers before final publishing decisions are made. • Invited reviewers are asked to decline their invitation if they have any perceived conflict of interest with the author, the author's affiliation and/or the topic of the paper.
  • 30. Reviewer Guidelines (available at www.slas.org) Four Primary Areas of Evaluation • Content • Presentation • Ethics • General
  • 31. Content • Is the manuscript within the defined scope of the journal? • Is the subject of the paper of sufficient interest to the journal's readership? • Does the paper report a specific, identifiable, advance in knowledge? • Has the work reported in this paper been published before? (Suggestion: search MEDLINE and/or Google Scholar by author and keywords.) • Are the title and abstract truly descriptive of the content? • Are the procedures and methods complete and sufficiently clear that the work could be repeated by anyone knowledgeable in the field? • Are the conclusions justified, sound and logically consistent? • Are the references to prior work pertinent and complete?
  • 32. Presentation • Is the paper as concise as it could be; consistent with clarity? • Are all figures and tables relevant and properly prepared? • Reviewers are not required to comment on grammar and punctuation. Instead, reviewers are encouraged to suggest changes that would remove ambiguity or clarify meaning.
  • 33. Ethics • Papers under review are confidential and should not be discussed or shown to others without the express permission of the editor-in-chief. • The identity of reviewers is kept anonymous. A reviewer should reveal his or her identify to an author only with permission from the editor-in-chief.
  • 34. General • Ensure the appropriate manuscript category is selected by the author. If you do not think the category selected by the author is the best fit for the manuscript, recommend a more appropriate category. • Ensure the author is following the journal's Instruction for Authors and American Chemistry Society (ACS) Style Guidelines. • Assessments should be returned on or before the specified deadline. Reviewers who may not be able to meet a deadline are urged to say so as soon as possible.
  • 35. • Please keep in mind that reviewer manuscript evaluations and comments will be relayed to authors as guides for revision. Be honest, but courteous. Offer constructive criticism to the authors so they can benefit from your expertise. Critique the manuscript, not the author. • Any comments for the editor's eyes only should be shared in a separate note.
  • 36. Permission Guidelines • Any text, tables, or figures reproduced from previously published work can only be reprinted with written permission from the copyright holder. • Permissions must be submitted with the manuscript, and must include print and online publication. • Acquiring permission is the sole responsibility of the author. • The publication from which the material is taken must be listed in the references.
  • 37. Copyright and Simultaneous Submissions • Manuscripts are considered for publication with the understanding that if a paper is accepted, copyright is transferred to SLAS, and that no paper presenting the same information has been or will be published elsewhere. • If part of a contribution has appeared or will appear elsewhere, the author must specify the details in the comments portion of the submission. • Simultaneous submissions of manuscripts to multiple journals at the same time is not acceptable — please do not submit manuscripts that may be under consideration by another publication or electronic medium. • JALA and JBS content becomes open access one year after final (print) publication. JALA and JBS offer an immediate open access option for a fee.
  • 38. JALA & JBS Copyright/Licensing Specifics • Authors retain copyright of their your work • The author may do whatever they wish with the version of the article they submitted to the journal (version 1). • Once the article has been accepted for publication, the author may post the accepted version (version 2) of the article on their own personal website, department’s website or the repository at the author’s institution without any restrictions. • Authors may use the published article (version 3) for their own teaching needs or to supply on an individual basis to research colleagues, provided that such supply is not for commercial purposes. • Authors may use the published article (version 3) in books they write or edit any time after publication in the journal. • When posting or re-using an article, authors must provide a link to the appropriate DOI for the published version of the article at JALA or JBS Online.
  • 39. • Authors are responsible for fulfilling whatever obligations they may have to funding agencies (e.g. NIH, Wellcome Trust, RCUK). Links to helpful information are available at www.slas.org. • Authors may not post the accepted version (version 2) of the article in any repository until 12 months after final (print) publication. • Authors may not use the published article (version 3) for commercial purposes or widespread dissemination. • Authors may not post the published article (version 3) on a website or in a repository without permission from SAGE.
  • 40. Publishing Ethics Definition of Plagiarism • From Merriam-Webster Dictionary: to steal and pass off (the ideas or words of another) as one's own : use (another's production) without crediting the source Typical Responses to Plagiarism • Author will be given an opportunity to explain themselves • During review process – failure to be accepted • After publication – retraction
  • 41. Conflicts of Interest • All prospective authors must recognize and disclose any conflict of interest, or potential conflict of interest, that may bias their work, or could be perceived to bias their work, and acknowledge all financial support and any other personal connections. • JALA follows the Uniform Requirements for Manuscripts of the International Committee of Medical Journal Editors, especially as they relate to conflicts of interest.
  • 42. Scientific Misconduct • Any action that involves purposeful manipulation of the scientific record such that it no longer reflects observed truth. Negligence and deceit. Such as: – Fabrication of data – Falsification of data – Plagiarism – Unethical treatment of research subjects • If SLAS suspects misconduct by authors, reviewers, editorial staff, or other editors, it will take action. This duty extends to both published and unpublished papers.
  • 43. Advice for Published Authors: PROMOTE! You can increase citations of your paper. Social media and other tactics are easy and free. Read the article Advice for Published Authors: Now is Not the Time to be Shy in the SLAS Electronic Laboratory Neighborhood e-zine at www.eln.slas.org.
  • 44. Tips and Resources at SLAS.org • Rollover “Publications” in menu bar at top of homepage • Select “Scientific Journals” in dropdown menu • www.slas.org/publications/scientific-journals