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Rift Valley fever virus seroprevalence among ruminants and
humans in northeast Kenya
Johanna Lindahl1,2, Ian Njeru3, Joan Karanja3, Delia Grace1, Bernard Bett1
1 International Livestock Research Institute, Nairobi, Kenya 2Swedish University of
Agricultural Sciences, Uppsala, Sweden 3Ministry of Health, Nairobi, Kenya
1
Today’s talk
1. An introduction to vector-borne diseases and
Rift Valley fever
2. Our project
3. Conclusions
Livestock
WildlifeHumans
Ecosystem
LH
WL
WH
X
Disease transmission Spillover event
Ecosystem services – and disease emergence
Ecosystem service Importance Effect of decrease
Provisioning Economics, livelihoods Increased poverty
Regulating Health, environment Increased disease
Cultural Well-being, recreation Increased stress?
Supporting Basis for the other services Increase in all above
WNV
WNV
Malaria
Malaria
Malaria
Dengue
Zika
Dengue
Dengue
Dengue
Yellow fever
Zika
Yellow fever
TBE
TBE
RSSE
Borrelia
Borrelia
RSSE
JEV
JEV
MVE
Ross River
SLEV
VEE, EEE, WEE
VEE
Bluetongue
Bluetongue
African horse sickness
African swine fever
African swine fever
Chikungunya
Chikungunya
JEV
Babesia
Babesia
Anaplasma, Chikungunya Zika
Sleeping sickness
Chaga’s disease
RVF, WNV Chikungunya
Climate and climate changes
Globalization
Urbanization
Land use changes
Why are vector-borne diseases emerging?
k= Probability that a vector feeding on an infected host gets infected
Pf = Probability that a vector survives from one meal to the next
Pe= Probability that a vector survives the extrinsic incubation period, EIP
Q= Probability that a vector feeds from the right host – blood index for the host
HBr= Host biting rate, the number of vectors feeding from an animal per day
v= Probability of pathogens becoming infectious in the vector
C= Vector capacity
C= HBr Qvk Pe/(1- Pf)
Vector capacity and competence
Rift Valley fever
• Bunyaviridae, phlebovirus
• High mortality, abortions in ruminants
• Haemorrhagic fever, encephalitis in humans
• Arbovirus – but also directly transmitted
Why irrigation?
• More and more range lands in Africa are being
converted to crop lands through irrigation to
alleviate food insecurity
• Results: major trade-offs in ecosystem services
More food produced (provisioning services) at the
expense of biodiversity and regulatory services
(disease, flooding, erosion)
Anthropogenic action:
Increased irrigation
Effect on ecosystem:
Creates more larval habitats
Vector consequence:
More infected vectors
Epidemiologic
consequence:
More individuals exposed
Increased
disease
Case study- irrigation and disease
Our project
• Rift Valley fever prevalence
– Humans
– Ruminants
• Land use changes
– Protected area vs. irrigated area
– Pastoralist areas
Hypothesis
• Irrigation in an arid and semi-
arid area increases the risk for
Rift Valley fever
• But other diseases can also be
affected by this…
• … and the doctors don’t know
if it is Rift Valley fever
Study site with stagnant
water in irrigation canals –
source of water for the locals
but also breeding grounds
for mosquitoes
Study area
•Tana River and Garissa
counties, northeastern Kenya
!.
!.
Bura
Hola
0 10 20 30 405
Kilometers
´
Legend
Settlements
Irrigation Schemes
permanent
mixed
temporary
!. Towns
Study Block
Tana River County
Tana River
Other Rivers
Riverrine Forests
Study site
Land use change
• Making changes in a highly diverse landscape
• Increased number of scavengers
• Increased numbers of mosquitoes
• Cross-sectional
– Humans
– Ruminants
– Mosquitoes
– Wildlife
– Ticks
• Longitudinal
– Human febrile cases
– Livestock: shoats
– Mosquitoes
Dynamic drivers of disease in Africa
Case study: Kenya
Prevalence in humans
21.12% 21.70%
27.16%
21.94%
0.00%
5.00%
10.00%
15.00%
20.00%
25.00%
30.00%
irrigation pastoral riverine Total
Significantly higher prevalence in men
Prevalence in ruminants
Ruminants
Overall
seropositivity
25.59%
Young 12.31%
Adults 30.22%
Male 14.81%
Female 28.80%
RVF-only part of the problem
– Too many differentials: Malaria, RVF, Dengue, YF,
Brucella, Leptospira, Chikungunya, CCHF
– Socioeconomic consequences and factors
Unwillingness to pay for prevention
Mosquito
nets
Vaccines and routine
clinic visits for kids
Boiling or other
water treatment
Insurance
(annual fee)
Other health
prevention
Mean 762 254 6.8 0.9 586
Range 0-3150 0-5000 4 households paid
between 150-600
220
households
paid nothing,
one household
paid 200
0-6000
How much did you spend last year on the following health protection (Kenyan shilling)?
Deworming Vaccinations (to
prevent not to treat)
Tick and fly
treatments
Insurance
(annual fee)
Mean 928 437 599 0
Range 0-11000 0-5000 0-5000 Not existing
How much did you spend last year on the following health prevention for animals?
The vicious cycle
Healthy
livestock,
more
production
Better
livelihoods,
healthier
people
Sick
livestock,
less income
Poorer
people,
more
disease
Impact of poor animal health
Herrero et al. (2013)
GHG per kg of animal protein produced
Conclusions
• Land use changes can affect disease occurrence
• Irrigation can sustain inter-epidemic transmission
• More people, more food insecurity and more
disease
CGIAR Research Program on
Agriculture for Nutrition and Health
Thanks to:
The whole DDDAC team
All participants
Acknowledgements
The presentation has a Creative Commons licence. You are free to re-use or distribute this work, provided credit is given to ILRI.
better lives through livestock
ilri.org

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Rift Valley fever virus seroprevalence among ruminants and humans in northeast Kenya

  • 1. Rift Valley fever virus seroprevalence among ruminants and humans in northeast Kenya Johanna Lindahl1,2, Ian Njeru3, Joan Karanja3, Delia Grace1, Bernard Bett1 1 International Livestock Research Institute, Nairobi, Kenya 2Swedish University of Agricultural Sciences, Uppsala, Sweden 3Ministry of Health, Nairobi, Kenya 1
  • 2. Today’s talk 1. An introduction to vector-borne diseases and Rift Valley fever 2. Our project 3. Conclusions
  • 4. Ecosystem services – and disease emergence Ecosystem service Importance Effect of decrease Provisioning Economics, livelihoods Increased poverty Regulating Health, environment Increased disease Cultural Well-being, recreation Increased stress? Supporting Basis for the other services Increase in all above
  • 5. WNV WNV Malaria Malaria Malaria Dengue Zika Dengue Dengue Dengue Yellow fever Zika Yellow fever TBE TBE RSSE Borrelia Borrelia RSSE JEV JEV MVE Ross River SLEV VEE, EEE, WEE VEE Bluetongue Bluetongue African horse sickness African swine fever African swine fever Chikungunya Chikungunya JEV Babesia Babesia Anaplasma, Chikungunya Zika Sleeping sickness Chaga’s disease RVF, WNV Chikungunya Climate and climate changes Globalization Urbanization Land use changes Why are vector-borne diseases emerging?
  • 6. k= Probability that a vector feeding on an infected host gets infected Pf = Probability that a vector survives from one meal to the next Pe= Probability that a vector survives the extrinsic incubation period, EIP Q= Probability that a vector feeds from the right host – blood index for the host HBr= Host biting rate, the number of vectors feeding from an animal per day v= Probability of pathogens becoming infectious in the vector C= Vector capacity C= HBr Qvk Pe/(1- Pf) Vector capacity and competence
  • 7. Rift Valley fever • Bunyaviridae, phlebovirus • High mortality, abortions in ruminants • Haemorrhagic fever, encephalitis in humans • Arbovirus – but also directly transmitted
  • 8.
  • 9. Why irrigation? • More and more range lands in Africa are being converted to crop lands through irrigation to alleviate food insecurity • Results: major trade-offs in ecosystem services More food produced (provisioning services) at the expense of biodiversity and regulatory services (disease, flooding, erosion)
  • 10. Anthropogenic action: Increased irrigation Effect on ecosystem: Creates more larval habitats Vector consequence: More infected vectors Epidemiologic consequence: More individuals exposed Increased disease Case study- irrigation and disease
  • 11. Our project • Rift Valley fever prevalence – Humans – Ruminants • Land use changes – Protected area vs. irrigated area – Pastoralist areas
  • 12. Hypothesis • Irrigation in an arid and semi- arid area increases the risk for Rift Valley fever • But other diseases can also be affected by this… • … and the doctors don’t know if it is Rift Valley fever Study site with stagnant water in irrigation canals – source of water for the locals but also breeding grounds for mosquitoes
  • 14. •Tana River and Garissa counties, northeastern Kenya !. !. Bura Hola 0 10 20 30 405 Kilometers ´ Legend Settlements Irrigation Schemes permanent mixed temporary !. Towns Study Block Tana River County Tana River Other Rivers Riverrine Forests Study site
  • 15. Land use change • Making changes in a highly diverse landscape • Increased number of scavengers • Increased numbers of mosquitoes
  • 16. • Cross-sectional – Humans – Ruminants – Mosquitoes – Wildlife – Ticks • Longitudinal – Human febrile cases – Livestock: shoats – Mosquitoes Dynamic drivers of disease in Africa Case study: Kenya
  • 17. Prevalence in humans 21.12% 21.70% 27.16% 21.94% 0.00% 5.00% 10.00% 15.00% 20.00% 25.00% 30.00% irrigation pastoral riverine Total Significantly higher prevalence in men
  • 18. Prevalence in ruminants Ruminants Overall seropositivity 25.59% Young 12.31% Adults 30.22% Male 14.81% Female 28.80%
  • 19. RVF-only part of the problem – Too many differentials: Malaria, RVF, Dengue, YF, Brucella, Leptospira, Chikungunya, CCHF – Socioeconomic consequences and factors
  • 20. Unwillingness to pay for prevention Mosquito nets Vaccines and routine clinic visits for kids Boiling or other water treatment Insurance (annual fee) Other health prevention Mean 762 254 6.8 0.9 586 Range 0-3150 0-5000 4 households paid between 150-600 220 households paid nothing, one household paid 200 0-6000 How much did you spend last year on the following health protection (Kenyan shilling)? Deworming Vaccinations (to prevent not to treat) Tick and fly treatments Insurance (annual fee) Mean 928 437 599 0 Range 0-11000 0-5000 0-5000 Not existing How much did you spend last year on the following health prevention for animals?
  • 22. Impact of poor animal health Herrero et al. (2013) GHG per kg of animal protein produced
  • 23. Conclusions • Land use changes can affect disease occurrence • Irrigation can sustain inter-epidemic transmission • More people, more food insecurity and more disease
  • 24. CGIAR Research Program on Agriculture for Nutrition and Health Thanks to: The whole DDDAC team All participants Acknowledgements
  • 25. The presentation has a Creative Commons licence. You are free to re-use or distribute this work, provided credit is given to ILRI. better lives through livestock ilri.org

Editor's Notes

  1. We can conclude that it is important to have a high sensitivity to circumvent porblems with the inhibition of PCR that may be caused by mosquitoes. We have also shown that it is possible to detect both genotype I and III within the same city, even in the same household. One per thousnad mosquitoes may be infected in an urban area. Wehave submitted these results.
  2. Herrero, M. PNAS