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Biomarker Discovery
            and Big Data
                    Abhinanda Sarkar

                  Chief Data Scientist
                COMPEGENCE, Bangalore


International Indian Statistical Association Conference
              Jan 2-5, 2013; Chennai, India
               http://www.iisaconference.info/
This is a critical intersection




                                  From: McKinsey Global Institute
Information and data from biomarkers




                                       From: Foundation Medicine
After the clinical trial …




                             From: Swanson at al. Genome Medicine, 2010
What’s ‘big’ about Big Data?




                               From: Oracle
Volume, Velocity, and Variety




                                From: HP
Text Mining for Gene Clusters




         From: Kankar, Adak, Sarkar, Murari, and Sharma, SIAM Data Mining, 2002
Text Mining for Gene Clusters




         From: Kankar, Adak, Sarkar, Murari, and Sharma, SIAM Data Mining, 2002
Text Mining for Gene Clusters




         From: Kankar, Adak, Sarkar, Murari, and Sharma, SIAM Data Mining, 2002
Big Data for Alzheimer’s Disease




                    From: Greco et al. Journal of Translational Medicine, 2012
Big Data for Alzheimer’s Disease




                    From: Greco et al. Journal of Translational Medicine, 2012
We need experts who know how to manage a mouse




                Source: www.favin.com
Process, Data and Domain driven Information Excellence




              ABOUT COMPEGENCE
Our Expertise and Focus Areas

 Process + Data + Domain => Decision


Analytics; Data Mining; Big Data; DWH & BI


Architecture and Methodology


Partnered Product Development


Consulting, Competency Building, Advisory, Mentoring


Executive Briefing Sessions and Deep Dive Workshops
Partners in Co-Creating Success


  Process, Data and Domain driven Information Excellence


Process, Data and Domain driven Business Decision Life Cycle




                                            www.compegence.com
                                           info@compegence.com

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Compegence: Dr Abhinanda Sarkar - Biomarker Discovery and Big Data_Statistical Association Conference_2013_Jan

  • 1. Biomarker Discovery and Big Data Abhinanda Sarkar Chief Data Scientist COMPEGENCE, Bangalore International Indian Statistical Association Conference Jan 2-5, 2013; Chennai, India http://www.iisaconference.info/
  • 2. This is a critical intersection From: McKinsey Global Institute
  • 3. Information and data from biomarkers From: Foundation Medicine
  • 4. After the clinical trial … From: Swanson at al. Genome Medicine, 2010
  • 5. What’s ‘big’ about Big Data? From: Oracle
  • 6. Volume, Velocity, and Variety From: HP
  • 7. Text Mining for Gene Clusters From: Kankar, Adak, Sarkar, Murari, and Sharma, SIAM Data Mining, 2002
  • 8. Text Mining for Gene Clusters From: Kankar, Adak, Sarkar, Murari, and Sharma, SIAM Data Mining, 2002
  • 9. Text Mining for Gene Clusters From: Kankar, Adak, Sarkar, Murari, and Sharma, SIAM Data Mining, 2002
  • 10. Big Data for Alzheimer’s Disease From: Greco et al. Journal of Translational Medicine, 2012
  • 11. Big Data for Alzheimer’s Disease From: Greco et al. Journal of Translational Medicine, 2012
  • 12. We need experts who know how to manage a mouse Source: www.favin.com
  • 13. Process, Data and Domain driven Information Excellence ABOUT COMPEGENCE
  • 14. Our Expertise and Focus Areas Process + Data + Domain => Decision Analytics; Data Mining; Big Data; DWH & BI Architecture and Methodology Partnered Product Development Consulting, Competency Building, Advisory, Mentoring Executive Briefing Sessions and Deep Dive Workshops
  • 15. Partners in Co-Creating Success Process, Data and Domain driven Information Excellence Process, Data and Domain driven Business Decision Life Cycle www.compegence.com info@compegence.com