1. Bryan Richard Soper, Ph.D.
San Francisco, CA • 415.265.6202 • brsoper@gmail.com
PROFILE
Specific knowledge of small molecule drugs and biologics in regards to mechanism of action,
clinical efficacy and adverse events, as well as the commercial marketplace
Experience mining big data and distilling relevant information for effective communication to
different target audiences
Highly collaborative and able to liaise easily with internal and external stakeholders
WORK EXPERIENCE
Medical Writer at Health Interactions Jan. 2016 – Present
Perform competitive intelligence contract work for Genentech/Roche
Develop content and presentation materials for competitive threat assessment
workshops to analyze competitor’s clinical trials and assess the potential efficacy and
probability of launch of therapies
Analyze the specificity/sensitivity of diagnostics, molecular and clinical features of
patient’s tumors, to render a quantitative assessment of a drug’s likelihood to achieve
frontline approval in a new indication that was missed by a panel of experts
Write quarterly reports and perform quality control on standard of care tables for five
Hematology / Oncology disease indications
PATENT
Bryan Soper (Sole Inventor and Assignee)
Patent number (France, U.K., Switzerland) : 1999668 Registered: Nov. 12, 2014
German patent number: 602007037897.4 Registered: Nov. 12, 2014
Japanese patent number: 5301424 Registered: June 28, 2013
International Application No. PCT/US2007/006563 Filed: March 15, 2007
Methods of Screening for and Mapping Phenotypic and Genotypic Variations in Cultured Cells
Employs a functional genomics means of discovering targets relevant to disease
Applicable in diseases capably modeled in single cells (e.g. cancer, HIV, Hep C)
Evaluates the value of a gene target against the current standard of care before
incurring the expense of therapeutic biologic or small molecule development
BIG DATA ANALYSIS
Meta-Analysis of Cancer Models and Clinical Outcomes 2010 –2011
Analyzed 324 pre-clinical treatments in 1455 experiments to test correlation to the
outcomes of 104 clinically tested treatments
Identified a dose-restricted set of data that demonstrates a statistically significant
correlation (r = -0.646, p = 0.002814) between pre-clinical experiments to phase 3
median overall survival benefit in patients
Meta-Analysis of Clinical Trial Outcomes 2012 – 2013
Analyzed 500 new investigational drugs in 1834 clinical trials listed on ClinicalTrials.Gov
to assess the need for new/better targets in non-small cell lung cancer (NSCLC)
Identified a mere 0.8% success rate in NSCLC phase 3 clinical trials in 12 years
2. BRYAN SOPER, PHD PAGE 2
ENTREPRENEURIAL EXPERIENCE
Business plan pitches 2005 – 2014
Secured meetings with leaders to pitch a business plan for drug development at:
o Roche (Head of Venture and Innovation, Jason Coloma)
o Gilead Sciences Inc. (Senior Director of Biology, Thomas Cihlar)
o Genomics Institute of the Novartis Research Foundation (Director, Peter Schultz)
o UCSF Comprehensive Cancer Center (Director, Frank McCormick)
o UCSF Center for AIDS Research (Co-director, Warner Greene)
RELATED EXPERIENCE
Innovation Accelerator Steering Committee member 2006 – 2008
RESEARCH EXPERIENCE
Postdoctoral Scholar 2007 – 2010
Staff Research Associate II 2006 – 2007
University of California, San Francisco - James McKerrow, Ph.D., M.D.
Employed patented method to identify new drug targets for HIV/AIDS, Leishmaniasis,
and Chagas disease
Investigated viral infection for transgenesis in the human parasite Schistosoma mansoni
Collaborated with Dr. Joseph DeRisi’s lab to identify endemic viruses by microarrays
Mentored students and peers by providing scientific direction and technical assistance
Initiated and organized a weekly meeting to provide scientific mentoring
Ph.D. Dissertation Research 1998 - 2005
Sloan-Kettering Institute - Kathryn V. Anderson, Ph.D.
Characterized pattern recognition receptors in the immune systems of flies and mice
Deleted a gene in mouse embryonic stem cells by homologous recombination to derive
a mouse deficient in a presumed pattern recognition receptor
Conducted genetic screens to identify genes involved in Drosophila innate immunity
Taught molecular genetics course as a graduate student instructor
EDUCATION
Ph.D., Molecular Biology 1998 - 2005
Cornell University, Weill Graduate School of Medical Sciences
Sloan-Kettering Institute, New York, NY
B.A., Molecular and Cell Biology emphasis in Genetics 1994 - 1997
University of California, Berkeley, CA
UC Berkeley MCB graduate with honors (1997)
California Alumni Leadership Scholar (1994-1997)
VOLUNTEER WORK
Head Soccer Coach (US Soccer Federation E License) 2013 - 2015
Coached mixed gender teams from U5-U7 beginner & returning leagues
Lead practices once to twice weekly for 2-3 teams during season
Parent Advisor for Early Childhood Education Steering Committee 2012 – 2014
3. BRYAN SOPER, PHD PAGE 3
CONGRESS PRESENTATIONS
B.R. Soper & K.V. Anderson. The role of Toll in distinguishing pathogens. Presented at 43rd
Annual Drosophila Research Conference. San Diego, CA, April 10-14, 2002. Abstract # 912
B.R. Soper & K.V. Anderson. Toll’s involvement in distinguishing pathogens. Presented at 42nd
Annual Drosophila Research Conference. Washington, DC, March 21-25, 2001. Abstract # 904
B.R. Soper & K.V. Anderson. Discovering Immunity: Identification of genes involved in
phagocytosis. Presented at 41st Annual Drosophila Research Conference. Pittsburgh, PA,
March 22-26, 2000. Abstract # 629
B.R. Soper, L. Sefton, T.W. Cline. A novel promoter for Sex-lethal?. Presented at 39th Annual
Drosophila Research Conference. Washington, DC, March, 1998.
TECHNICAL EXPERTISE/EXPERIENCE
DNA/RNA related
PCR, RT-PCR, quantitative PCR, cloning, plasmid construction, epitope tag fusions
Whole mount and single cell in-situ hybridizations
Southern/Northern blots
Comparative genomic hybridizations
Microarray analysis
RNA interference, siRNA, dsRNA
Animal related
Mouse husbandry, genotyping, tissue dissection and isolation of cell types
Single blastocyst isolations from timed pregnancies
Reverse perfusions, IP and tail vein injections
Protein related
Recombinant protein expression/purification
Enzymatic activity and drug screening inhibition assays
Western blots, SDS PAGE, ELISAs
Cell culture related
Culturing human, murine, rodent, insect, and embryonic stem cell lines
Homologous recombination to delete genes
Flow cytometry, FACS to isolate single cell clones and establish cell lines
Primary cell culture and viral transduction
Bone marrow isolation and derivation of dendritic cells and macrophages
Recombinant viral production for transduction
Microscopy related
Confocal, compound, dissecting, fluorescent microscopy
Live cell/animal imaging/video