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Phytochrome and Seed
Germination
By Abrar Ahmad
Many other light controlled plant responses other than
photosynthesis, collectively called photo-morphogenesis,
are the effects of phytochrome action.
Light plays a crucial role in various aspects of plant
development including seed germination
Light and Plant Development
• Plants detect parts of the light spectrum that are relevant for
photosynthesis.
• Classes of major plant photoreceptors:
• 1) Phytochromes: detect red light
• 2) Cryptochromes: detect blue light
• 3) Phytotropins: detect blue light
Wavelength (nm)
400 500 600 700
0
20
40
60
80
100
chlorophyll b
chlorophyll a
Percent
of
light
absorbed
Light wavelengths detected by plant light receptors
Phytochromes
Cryptochromes and
Phytotropins
Red light
(630 to 680 nm)
far-red light
(710 to 740 nm)
Phytochromes
(Phyto: Plant, Chromes: Pigment)
Phytochrome is a blue protein pigment responsible for the
perception of light in photo-physiological processes.
Detect Red Light
Seed germination of many plant species is influenced
by light. Of the various photoreceptor systems, phytochrome plays an especially
important role in seed germination.
1. PHYA (Important under far-red light)
2. PHYB (important under red light)
3. PHYC
4. PHYD
5. PHYE
PHYD is a recent duplicated copy, most closely related
to PHYB
Clades of Phytochromes
PHYA and PHYB regulate germination responses to light
PHYE has been shown
to contribute to
germination in
continuous far-red light
PHYD, in combination with
PHYB, play a role in
inhibiting the PHYA-
mediated very low-fluence
response in far-red light
Red Light
• To maximize photosynthesis
Phytochromes :
1) promote seed germination
2) promote de-etiolation
3) control shade avoidance
4) control circadian entrainment
5) control flowering
• Etiolated plants are
plants that have been
growing in complete
darkness and are usually
long, skinny and white
• De-etiolation is the
process by which plants
change or convert their
etioplasts, plastids,
within its cells into
chloroplasts.
History of Phytochrome in Seed Germination
• In 1932, Beltsville research group of the USDA headed by Borthwick
and Hendricks showed that red light (630 to 680 nm) elicits the
germination of lettuce seeds, whereas far-red light (710 to 740 nm)
inhibits the process.
• It was further observed that when lettuce seeds were exposed to
alternating red and far-red light, almost all seeds that received red light
as the final treatment germinated, whereas the seeds receiving far-red
light as the final treatment did not germinate.
Phytochrome Promote Seed Germination
Phytochrome was also
shown to control the
germination of seeds.
Red light (activates the
receptor) promotes
seed germination and
far red light suppresses
the red light effect.
Phytochromes play important role in promoting the synthesis of gibberellins (important stimulants for
germination)
Phytochromes have also been shown to be involved in the degradation of abscisic acid
The predicted properties of the receptor
Irradiation is the process by which an object is exposed to radiation
Phytochrome
red light
Phytochrome
far-red light
Interconvertible
A protein linked to a chromophore
The chromophore (a tetrapyrrole compound) allows phytochrome to
change in response to red or far-red light.
Red
light
Far Red
light
leading to a change in its activity.
,
Active version of
Phytochrome:
Promotes seed
germination,
shade avoidance,
and controls circadian
entrainment, flowering,
etc…
Inactive version of
Phytochrome
Active Phytochrome
Phytochrome promotes de-etiolation
Seedlings grown in the dark display an etiolated growth
pattern:
1) yellow unexpanded cotyledons
2) apical hook
3) Long hypocotyl
Seedlings grown in red light (or white light) display a de-
etiolated growth pattern (opposite to etiolated):
• Green expanded cotyledons
• No apical hook
• Short hypocotyl
Red light promotes chloroplast development and leaf
expansion. Leaves (cotyledons) are also growing in
upright position, allowing optimal light impact. Active
phytochrome promotes seedling development that is
optimal for photosynthesis.
Phytochrome controls shade avoidance
Seedlings that are shaded by larger (taller)
plants that grow above them will show a
shade avoidance response.
A shade avoidance response involves
increased elongation growth (stems and
petioles) and inhibition of leaf expansion.
As a result, the seedling will grow “above”
of what causes the shade and will now be
able to perform more efficient
photosynthesis.
As soon as the seedling is not anymore
shaded, shade-avoidance growth stops.
The shade avoidance response is controlled by Phytochromes
and results from changes in the ratio of red to far-red light.
Chlorophyl from plants that grow above the shaded seedling
absorb blue and red light (but not far red light). The result is a
lower ratio of red to far-red light received by the shaded plant.
Lower levels of red light compared to far-red light means a
lower level of active Phytochrome (Pfr) compared to inactive
Phytochrome (Pr).
Lower level of active Phytochrome will lead to more
elongation growth and less leaf expansion.
Phytochrome controls shade avoidance
Due to high level
Phytochrome (Pfr)
Shade avoidance and Red:Far Red ratio
Active phytochrome
Germination is the process by which the seed embryo begins
growth. A seed is considered to have germinated when the
embryonic root emerges from the seed coat. Many important
crops are grown from seed. Wheat, rice, cotton, and vegetables are
started from seeds. Seed germination is a complex process that
begins when conditions are favorable for growth.
Some plants produce seeds, which germinate immediately
once they are released. Others produce seeds that have
internal dormancy mechanisms and remain dormant until
conditions are favorable before the seed can germinate.
Stages of Germination
Stage 1:
Germination begins with the seed’s
absorption of water. Most dormant
seeds have 5–10% moisture content.
When conditions are right, water is
absorbed very rapidly. Most water is
absorbed through the micropyle. As
the cells hydrate, they swell and
become turgid or rigid. The moisture
triggers an increase in cellular
respiration. Oxygen must be present
for cellular respiration.
Stage 2:
In stage two, metabolic activity surges.
Proteins are synthesized. Gibberellins
stimulate the production of enzymes. The
enzyme amylase converts stored starches
to sugars. The enzyme protease breaks
down stored proteins into amino acids.
The sugars and amino acids are directed
towards cell division, growth, and
differentiation sites at the root and shoot
meristems or tips.
There are three major stages in the germination process.
Stage 3:
Metabolic processes
increase in the third
phase of germination.
The swelling of cells
causes the seed coat to
rupture. The primary
root or radicle emerges
downward, and the
stem grows upwards.
The shoot begins
manufacturing food
through
photosynthesis. The
roots absorb water and
nutrients.
Conditions are Required for Seed
Germination begins when favorable conditions exist for
the survival of the developing plant.
The conditions for germination include moisture, air,
optimal temperatures, and possibly light or darkness.
– Water triggers germination processes and is necessary as the
embryo grows and develops.
All seeds need oxygen to germinate. Oxygen is required for cellular
respiration, a process necessary for converting stored food into energy.
Seeds germinate at a wide range of temperatures ranging from 0°C
to 40.6°C. However, the optimum temperature for most seeds lies
between 18.3°C and 26.7°C. Temperature influences the speed of
metabolic activities. Metabolism is faster when temperatures are
warm than when temperatures are cool.
Seeds of some plants need
exposure to light before they
will germinate. Seeds of other
plants require darkness in order
to germinate, and there are
those that are not influenced by
light or darkness. Seeds that are
light sensitive have a
photoreceptor pigment, called
phytochrome, found in the
seed coat. This pigment sends
messages to the seed
instructing it to initiate or to
stop germination.
Thank You

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Phytochrome and Seed Germination by Abrar Ahmad

  • 2. Many other light controlled plant responses other than photosynthesis, collectively called photo-morphogenesis, are the effects of phytochrome action. Light plays a crucial role in various aspects of plant development including seed germination
  • 3. Light and Plant Development • Plants detect parts of the light spectrum that are relevant for photosynthesis. • Classes of major plant photoreceptors: • 1) Phytochromes: detect red light • 2) Cryptochromes: detect blue light • 3) Phytotropins: detect blue light
  • 4. Wavelength (nm) 400 500 600 700 0 20 40 60 80 100 chlorophyll b chlorophyll a Percent of light absorbed Light wavelengths detected by plant light receptors Phytochromes Cryptochromes and Phytotropins Red light (630 to 680 nm) far-red light (710 to 740 nm)
  • 5. Phytochromes (Phyto: Plant, Chromes: Pigment) Phytochrome is a blue protein pigment responsible for the perception of light in photo-physiological processes. Detect Red Light
  • 6. Seed germination of many plant species is influenced by light. Of the various photoreceptor systems, phytochrome plays an especially important role in seed germination. 1. PHYA (Important under far-red light) 2. PHYB (important under red light) 3. PHYC 4. PHYD 5. PHYE PHYD is a recent duplicated copy, most closely related to PHYB Clades of Phytochromes PHYA and PHYB regulate germination responses to light PHYE has been shown to contribute to germination in continuous far-red light PHYD, in combination with PHYB, play a role in inhibiting the PHYA- mediated very low-fluence response in far-red light
  • 7. Red Light • To maximize photosynthesis Phytochromes : 1) promote seed germination 2) promote de-etiolation 3) control shade avoidance 4) control circadian entrainment 5) control flowering • Etiolated plants are plants that have been growing in complete darkness and are usually long, skinny and white • De-etiolation is the process by which plants change or convert their etioplasts, plastids, within its cells into chloroplasts.
  • 8. History of Phytochrome in Seed Germination • In 1932, Beltsville research group of the USDA headed by Borthwick and Hendricks showed that red light (630 to 680 nm) elicits the germination of lettuce seeds, whereas far-red light (710 to 740 nm) inhibits the process. • It was further observed that when lettuce seeds were exposed to alternating red and far-red light, almost all seeds that received red light as the final treatment germinated, whereas the seeds receiving far-red light as the final treatment did not germinate.
  • 9. Phytochrome Promote Seed Germination Phytochrome was also shown to control the germination of seeds. Red light (activates the receptor) promotes seed germination and far red light suppresses the red light effect. Phytochromes play important role in promoting the synthesis of gibberellins (important stimulants for germination) Phytochromes have also been shown to be involved in the degradation of abscisic acid
  • 10. The predicted properties of the receptor Irradiation is the process by which an object is exposed to radiation Phytochrome red light Phytochrome far-red light Interconvertible
  • 11. A protein linked to a chromophore The chromophore (a tetrapyrrole compound) allows phytochrome to change in response to red or far-red light.
  • 12. Red light Far Red light leading to a change in its activity. ,
  • 13. Active version of Phytochrome: Promotes seed germination, shade avoidance, and controls circadian entrainment, flowering, etc… Inactive version of Phytochrome Active Phytochrome
  • 14. Phytochrome promotes de-etiolation Seedlings grown in the dark display an etiolated growth pattern: 1) yellow unexpanded cotyledons 2) apical hook 3) Long hypocotyl Seedlings grown in red light (or white light) display a de- etiolated growth pattern (opposite to etiolated): • Green expanded cotyledons • No apical hook • Short hypocotyl Red light promotes chloroplast development and leaf expansion. Leaves (cotyledons) are also growing in upright position, allowing optimal light impact. Active phytochrome promotes seedling development that is optimal for photosynthesis.
  • 15. Phytochrome controls shade avoidance Seedlings that are shaded by larger (taller) plants that grow above them will show a shade avoidance response. A shade avoidance response involves increased elongation growth (stems and petioles) and inhibition of leaf expansion. As a result, the seedling will grow “above” of what causes the shade and will now be able to perform more efficient photosynthesis. As soon as the seedling is not anymore shaded, shade-avoidance growth stops.
  • 16. The shade avoidance response is controlled by Phytochromes and results from changes in the ratio of red to far-red light. Chlorophyl from plants that grow above the shaded seedling absorb blue and red light (but not far red light). The result is a lower ratio of red to far-red light received by the shaded plant. Lower levels of red light compared to far-red light means a lower level of active Phytochrome (Pfr) compared to inactive Phytochrome (Pr). Lower level of active Phytochrome will lead to more elongation growth and less leaf expansion. Phytochrome controls shade avoidance Due to high level Phytochrome (Pfr)
  • 17. Shade avoidance and Red:Far Red ratio Active phytochrome
  • 18. Germination is the process by which the seed embryo begins growth. A seed is considered to have germinated when the embryonic root emerges from the seed coat. Many important crops are grown from seed. Wheat, rice, cotton, and vegetables are started from seeds. Seed germination is a complex process that begins when conditions are favorable for growth. Some plants produce seeds, which germinate immediately once they are released. Others produce seeds that have internal dormancy mechanisms and remain dormant until conditions are favorable before the seed can germinate.
  • 19.
  • 20. Stages of Germination Stage 1: Germination begins with the seed’s absorption of water. Most dormant seeds have 5–10% moisture content. When conditions are right, water is absorbed very rapidly. Most water is absorbed through the micropyle. As the cells hydrate, they swell and become turgid or rigid. The moisture triggers an increase in cellular respiration. Oxygen must be present for cellular respiration. Stage 2: In stage two, metabolic activity surges. Proteins are synthesized. Gibberellins stimulate the production of enzymes. The enzyme amylase converts stored starches to sugars. The enzyme protease breaks down stored proteins into amino acids. The sugars and amino acids are directed towards cell division, growth, and differentiation sites at the root and shoot meristems or tips. There are three major stages in the germination process.
  • 21. Stage 3: Metabolic processes increase in the third phase of germination. The swelling of cells causes the seed coat to rupture. The primary root or radicle emerges downward, and the stem grows upwards. The shoot begins manufacturing food through photosynthesis. The roots absorb water and nutrients.
  • 22. Conditions are Required for Seed Germination begins when favorable conditions exist for the survival of the developing plant. The conditions for germination include moisture, air, optimal temperatures, and possibly light or darkness. – Water triggers germination processes and is necessary as the embryo grows and develops. All seeds need oxygen to germinate. Oxygen is required for cellular respiration, a process necessary for converting stored food into energy. Seeds germinate at a wide range of temperatures ranging from 0°C to 40.6°C. However, the optimum temperature for most seeds lies between 18.3°C and 26.7°C. Temperature influences the speed of metabolic activities. Metabolism is faster when temperatures are warm than when temperatures are cool. Seeds of some plants need exposure to light before they will germinate. Seeds of other plants require darkness in order to germinate, and there are those that are not influenced by light or darkness. Seeds that are light sensitive have a photoreceptor pigment, called phytochrome, found in the seed coat. This pigment sends messages to the seed instructing it to initiate or to stop germination.