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Introduction to Human
Anatomy and Cell biology




        Dr. Obimbo MM
   MBChB, MSc. Dip Felasa C, PhD (c)
Anatomical Etymology
• Anatomy- Science of the structure of body
• Greek ‘anatome’- ana – up, tome – cutting
• Latin ‘dissecare’ – dis – asunder, secare – cut
  (dissection)
• Anatome = dissecare
• Study of Anatomy introduces students to
  greater terminology
 Anatomy is to Physiology, as Geography is
  to History
 Emphasis should be placed on the
  Anatomy of living body
 ◦ Surface Anatomy
 ◦ Radiological Anatomy
 Major divisions of Anatomy
 ◦   Gross
 ◦   Microscopic
 ◦   Embryology
 ◦   Neuroanatomy
• Anatomy may be studied systematically or
  regionally (topographical)
• Body systems
  – Name??
• Body topography
  – ??
Rules Guiding etymology
• 1. Each structure shall be designated by one term

• 2. Every term in official list shall be in Latin

• 3. The term shall primarily be for memory signs

• 4. No usage of eponyms
Anatomical Position and Direction
• The body standing erect, facing forward,
  feet together, toes pointed slightly apart,
  hands at one’s side, palms facing forward.
• Once the body is in this position (or
  imagined to be in this position,) the
  positional terms can be used correctly.
Terms
• Medial/ lateral – nearer/away median plane
• Anterior/posterior – near front/near the back
• Superior/inferior – nearer the head/toe
   – (cf, cranial/caudal/rostral)
• Proximal/ distal – limbs
• Internal and external – nearer/away from center of an
  organ (cf, middle)
• Superficial/deep
• Supine/prone
• Ipsilateral/contralateral
Terms of body movement
 FLEXION: reduces the angle of the joint from the
  anatomical position. Flex elbow
 EXTENSION: movement that returns you to
  anatomical position. Extend elbow.
 ◦ All these terms refer to either a body part or a joint.
 HYPEREXTENSION: extension beyond anatomical
  position; wrist, neck.
 Some terms relate only to certain areas, such as the
  ankle:
 DORSIFLEXION: lift up toes
 PLANTARFLEXION: move toes down
 INVERSION: when sole of foot points inward
 EVERSION: sole of foot points outward.
 ABDUCTION: move body part away from midline;
  arm, fingers, thumb
 ADDUCTION: bring back to midline; arms, fingers,
  thumb
 ROTATION: pivot on an axis; shake head
  “no”; can rotate head and shoulder
 CIRCUMDUCTION: to draw a circle with
  body part; shoulder, head
 PRONATION (to lie prone is on stomach).
  Turn hands downward.
 SUPINATION: refers to arms; want a bowl of
  soup, supinate
 PROTRACTION: to move anteriorily;
  shoulders, mandible
 RETRACTION: to move part posteriorly;
  shoulders
 ELEVATION: to raise part superiorly;
  shoulders
 DEPRESSION: to lower part; open mouth.
Main areas to be studied
•   Osteology and arthrology
•   Myology
•   Angiology
•   Neurology
•   Splanchnology
•   Surface marking/ anatomy
Cell Structure and Function
Chapter Outline
• Cell theory
• Properties common to all cells
• Cell size and shape – why are cells so small?
• Eukaryotic cells
   – Organelles and structure in all eukaryotic cell
• Cell junctions
History of Cell Theory
• mid 1600s – Anton van Leeuwenhoek
  – Improved microscope, observed many living cells

• mid 1600s – Robert Hooke
  – Observed many cells including cork cells

• 1850 – Rudolf Virchow
  – Proposed that all cells come from existing cells
Cell Theory
1. All organisms consist of 1 or more cells.
2. Cell is the smallest unit of life.
3. All cells come from pre-existing cells.
Observing Cells
• Light microscope
  – Can observe living cells in true color
  – Magnification of up to ~1000x
  – Resolution ~ 0.2 microns – 0.5 microns
Observing Cells
• Electron Microscopes
  – Preparation needed to kill the cells
  – Images are black and white – may be colorized
  – Magnifcation up to ~100,000
     • Transmission electron microscope (TEM)
        – 2-D image
     • Scanning electron microscope (SEM)
        – 3-D image
SEM


      TEM
Cell Structure
• All Cells have:
  –an outermost plasma membrane
  –genetic material in the form of DNA
  –cytoplasm
Cell Structure
• All Cells have:
  –an outermost plasma membrane
    • Structure – phospholipid bilayer with
      embedded proteins
    • Function – isolates cell contents, controls
      what gets in and out of the cell, receives
      signals
Cell Structure
• All Cells have:
  –genetic material in the form of DNA
    • Eukaryotes – DNA is within a membrane
      (nucleus)
    • Prokaryotes – no membrane around the
      DNA (DNA region called nucleoid)
Cell Structure
• All Cells have:
  –cytoplasm with organelles
    • Cytoplasm – fluid area inside outer
      plasma membrane and outside DNA
      region
Eukaryotic Cells
• Structures in all eukaryotic cells
  – Nucleus
  – Ribosomes
  – Endomembrane System
     • Endoplasmic reticulum – smooth and rough
     • Golgi apparatus
     • Vesicles
  – Mitochondria
  – Cytoskeleton
NUCLEUS
CYTOSKELETON


                                  RIBOSOMES




MITOCHONDRION                          ROUGH ER




                                      SMOOTH ER



     CENTRIOLES

                                 GOLGI BODY


                PLASMA     LYSOSOME
                MEMBRANE
                                       Fig. 4-15b, p.59
Nucleus
• Function – isolates the cell’s genetic material,
  DNA
  – DNA directs/controls the activities of the cell
     • DNA determines which types of RNA are made
     • The RNA leaves the nucleus and directs the synthesis of
       proteins in the cytoplasm
Nucleus
• Structure
   – Nuclear envelope
      • Two Phospholipid bilayers with protein
        lined pores
        –Each pore is a ring of 8 proteins with an
         opening in the center of the ring
  – Nucleoplasm – fluid of the nucleus
Nuclear pore   bilayer facing cytoplasm   Nuclear envelope




                         bilayer facing
                         nucleoplasm




                                                     Fig. 4-17, p.61
Nucleus
• DNA is arranged in chromosomes
  – Chromosome – fiber of DNA and the
    proteins attached to the DNA

  – Chromatin – all of the cell’s DNA and the
    associated proteins
Nucleus
• Structure, continued
   – Nucleolus
      • Area of condensed DNA
      • Where ribosomal subunits are made
         – Subunits exit the nucleus via nuclear pores
Endomembrane System
• Series of organelles responsible for:
  – Modifying protein chains into their final
    form
  – Synthesizing of lipids
  – Packaging of fully modified proteins and
    lipids into vesicles for export or use in the
    cell
Endomembrane System
• Endoplasmic Reticulum (ER)
  – Continuous with the outer membrane of
    the nuclear envelope
  – Two forms - smooth and rough
• Transport vesicles
• Golgi apparatus
Endoplasmic Reticulum
• Rough Endoplasmic Reticulum (RER)
     • Network of flattened membrane sacs create a
       “maze”
     • Ribosomes attached to the outside of the RER
       make it appear rough
Endoplasmic Reticulum
• Function RER
     • Where proteins are modified and packaged in
       transport vesicles for transport to the Golgi
       body
Endomembrane System
• Smooth ER (SER)
  – Tubular membrane structure
  – Continuous with RER
  – No ribosomes attached
• Function SER
  – Synthesis of lipids (fatty acids, phospholipids,
    sterols..)
Endomembrane System
• Additional functions of the SER
  – In muscle cells, the SER stores calcium ions and
    releases them during muscle contractions
  – In liver cells, the SER detoxifies medications and
    alcohol
Golgi Apparatus
• Golgi Apparatus
  – Stack of flattened membrane sacs
• Function Golgi apparatus
  – Completes the processing substances received
    from the ER
  – Sorts, tags and packages fully processed proteins
    and lipids in vesicles
Golgi Apparatus
– The proteins and lipids are modified as they pass
  through layers of the Golgi
– Molecular tags are added to the fully modified
  substances
   • These tags allow the substances to be sorted and
     packaged appropriately.
   • Tags also indicate where the substance is to be shipped.
Transport Vesicles
• Transport Vesicles
  – Vesicle = small membrane bound sac
  – Transport modified proteins and lipids from the ER
    to the Golgi apparatus (and from Golgi to final
    destination)
Endomembrane System
• Putting it all together
   – DNA directs RNA synthesis  RNA exits
     nucleus through a nuclear pore  ribosome
      protein is made  proteins with proper
     code enter RER  proteins are modified in
     RER and lipids are made in SER  vesicles
     containing the proteins and lipids bud off
     from the ER
Endomembrane System
• Putting it all together
   ER vesicles merge with Golgi body 
    proteins and lipids enter Golgi  each is
    fully modified as it passes through layers of
    Golgi  modified products are tagged,
    sorted and bud off in Golgi vesicles  …
Endomembrane System
• Putting it all together
    Golgi vesicles either merge with the
    plasma membrane and release their
    contents OR remain in the cell and serve a
    purpose
Vesicles
• Vesicles - small membrane bound sacs
  – Examples
     • Golgi and ER transport vesicles
     • Peroxisome
        – Where fatty acids are metabolized
        – Where hydrogen peroxide is detoxified
     • Lysosome
Lysosomes
• The lysosome is an example of an organelle
  made at the Golgi apparatus.
  – Golgi packages digestive enzymes in a vesicle. The
    vesicle remains in the cell and:
     • Digests unwanted or damaged cell parts
     • Merges with food vacuoles and digest the contents
Mitochondria (4.15)
•   Function – synthesis of ATP
    – 3 major pathways involved in ATP production
      1. Glycolysis
      2. Krebs Cycle
      3. Electron transport system (ETS)
Mitochondria
• Structure:
  – ~1-5 microns
  – Outer membrane
  – Inner membrane - Highly folded
     • Folds called cristae
  – Intermembrane space (or outer compartment)
  – Matrix
     • DNA and ribosomes in matrix
Mitochondria
Cytoskeleton (4.16, 4.17)
• Function
  – gives cells internal organization, shape, ability to
    move and polarity
• Structure
  – Interconnected system of microtubules,
    microfilaments, and intermediate filaments
     • All are proteins
Cytoskeleton
Cell Junctions
•   Plasma membrane proteins connect
    neighboring cells - called cell junctions
    – Plant cells – plasmodesmata provide channels
      between cells
Cell Junctions (4.18)
•   3 types of cell junctions in animal cells
    1. Tight junctions
    2. Anchoring junctions
    3. Gap junctions
Cell Junctions
1. Tight junctions – membrane proteins seal
   neighboring cells so that water soluble
   substances cannot cross between them
  •   Seen between stomach cells
Cell Junctions
2. Anchoring junctions – cytoskeleton fibers
   join cells in tissues that need to stretch
  •   See between heart, skin, and muscle cells

3. Gap junctions – membrane proteins on
   neighboring cells link to form channels
  •   This links the cytoplasm of adjoining cells
Tight junction


 Anchoring
 junction


  Gap junction
Cell specialization
Specialized cell          Function                     Modification

Muscle cell               Contraction                  Myofilaments

Pancreatic acinar cell    Synthesis and secretion of   RER
                          enzymes


Kidney tubular cells      Ion transport                Basal membrane infoldings

Macrophages               Intracellular digestion      Lysosomes

Sensory cells             Transformation of stimuli    Membrane receptors
                          into nerve impulses


Leydig Testicular cells   Synthesis and secretion of   SER
                          testosterone
Tissues
• Tissues are collection of cells that subserve
  specific function
• Four fundamental types:
  – Epithelial
  – Supporting
  – Propulsion
  – Nervous
  – Composed of cells, intercellular matrix and tissue
    fluid
Scope of microscopic Anatomy
• Cytology
• Histology
• Organology
The end....
• “ No man should marry until he has studied
  anatomy and dissected at least one woman”

               Honore de Balzac




       Thank you!!

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Lesson 1 introduction to human anat and cell structure

  • 1. Introduction to Human Anatomy and Cell biology Dr. Obimbo MM MBChB, MSc. Dip Felasa C, PhD (c)
  • 2. Anatomical Etymology • Anatomy- Science of the structure of body • Greek ‘anatome’- ana – up, tome – cutting • Latin ‘dissecare’ – dis – asunder, secare – cut (dissection) • Anatome = dissecare • Study of Anatomy introduces students to greater terminology
  • 3.  Anatomy is to Physiology, as Geography is to History  Emphasis should be placed on the Anatomy of living body ◦ Surface Anatomy ◦ Radiological Anatomy  Major divisions of Anatomy ◦ Gross ◦ Microscopic ◦ Embryology ◦ Neuroanatomy
  • 4. • Anatomy may be studied systematically or regionally (topographical) • Body systems – Name?? • Body topography – ??
  • 5. Rules Guiding etymology • 1. Each structure shall be designated by one term • 2. Every term in official list shall be in Latin • 3. The term shall primarily be for memory signs • 4. No usage of eponyms
  • 7. • The body standing erect, facing forward, feet together, toes pointed slightly apart, hands at one’s side, palms facing forward. • Once the body is in this position (or imagined to be in this position,) the positional terms can be used correctly.
  • 8. Terms • Medial/ lateral – nearer/away median plane • Anterior/posterior – near front/near the back • Superior/inferior – nearer the head/toe – (cf, cranial/caudal/rostral) • Proximal/ distal – limbs • Internal and external – nearer/away from center of an organ (cf, middle) • Superficial/deep • Supine/prone • Ipsilateral/contralateral
  • 9.
  • 10. Terms of body movement  FLEXION: reduces the angle of the joint from the anatomical position. Flex elbow  EXTENSION: movement that returns you to anatomical position. Extend elbow. ◦ All these terms refer to either a body part or a joint.  HYPEREXTENSION: extension beyond anatomical position; wrist, neck.  Some terms relate only to certain areas, such as the ankle:  DORSIFLEXION: lift up toes  PLANTARFLEXION: move toes down  INVERSION: when sole of foot points inward  EVERSION: sole of foot points outward.  ABDUCTION: move body part away from midline; arm, fingers, thumb  ADDUCTION: bring back to midline; arms, fingers, thumb
  • 11.  ROTATION: pivot on an axis; shake head “no”; can rotate head and shoulder  CIRCUMDUCTION: to draw a circle with body part; shoulder, head  PRONATION (to lie prone is on stomach). Turn hands downward.  SUPINATION: refers to arms; want a bowl of soup, supinate  PROTRACTION: to move anteriorily; shoulders, mandible  RETRACTION: to move part posteriorly; shoulders  ELEVATION: to raise part superiorly; shoulders  DEPRESSION: to lower part; open mouth.
  • 12. Main areas to be studied • Osteology and arthrology • Myology • Angiology • Neurology • Splanchnology • Surface marking/ anatomy
  • 13. Cell Structure and Function
  • 14. Chapter Outline • Cell theory • Properties common to all cells • Cell size and shape – why are cells so small? • Eukaryotic cells – Organelles and structure in all eukaryotic cell • Cell junctions
  • 15. History of Cell Theory • mid 1600s – Anton van Leeuwenhoek – Improved microscope, observed many living cells • mid 1600s – Robert Hooke – Observed many cells including cork cells • 1850 – Rudolf Virchow – Proposed that all cells come from existing cells
  • 16. Cell Theory 1. All organisms consist of 1 or more cells. 2. Cell is the smallest unit of life. 3. All cells come from pre-existing cells.
  • 17. Observing Cells • Light microscope – Can observe living cells in true color – Magnification of up to ~1000x – Resolution ~ 0.2 microns – 0.5 microns
  • 18. Observing Cells • Electron Microscopes – Preparation needed to kill the cells – Images are black and white – may be colorized – Magnifcation up to ~100,000 • Transmission electron microscope (TEM) – 2-D image • Scanning electron microscope (SEM) – 3-D image
  • 19. SEM TEM
  • 20. Cell Structure • All Cells have: –an outermost plasma membrane –genetic material in the form of DNA –cytoplasm
  • 21. Cell Structure • All Cells have: –an outermost plasma membrane • Structure – phospholipid bilayer with embedded proteins • Function – isolates cell contents, controls what gets in and out of the cell, receives signals
  • 22. Cell Structure • All Cells have: –genetic material in the form of DNA • Eukaryotes – DNA is within a membrane (nucleus) • Prokaryotes – no membrane around the DNA (DNA region called nucleoid)
  • 23. Cell Structure • All Cells have: –cytoplasm with organelles • Cytoplasm – fluid area inside outer plasma membrane and outside DNA region
  • 24. Eukaryotic Cells • Structures in all eukaryotic cells – Nucleus – Ribosomes – Endomembrane System • Endoplasmic reticulum – smooth and rough • Golgi apparatus • Vesicles – Mitochondria – Cytoskeleton
  • 25. NUCLEUS CYTOSKELETON RIBOSOMES MITOCHONDRION ROUGH ER SMOOTH ER CENTRIOLES GOLGI BODY PLASMA LYSOSOME MEMBRANE Fig. 4-15b, p.59
  • 26. Nucleus • Function – isolates the cell’s genetic material, DNA – DNA directs/controls the activities of the cell • DNA determines which types of RNA are made • The RNA leaves the nucleus and directs the synthesis of proteins in the cytoplasm
  • 27. Nucleus • Structure – Nuclear envelope • Two Phospholipid bilayers with protein lined pores –Each pore is a ring of 8 proteins with an opening in the center of the ring – Nucleoplasm – fluid of the nucleus
  • 28. Nuclear pore bilayer facing cytoplasm Nuclear envelope bilayer facing nucleoplasm Fig. 4-17, p.61
  • 29. Nucleus • DNA is arranged in chromosomes – Chromosome – fiber of DNA and the proteins attached to the DNA – Chromatin – all of the cell’s DNA and the associated proteins
  • 30. Nucleus • Structure, continued – Nucleolus • Area of condensed DNA • Where ribosomal subunits are made – Subunits exit the nucleus via nuclear pores
  • 31.
  • 32. Endomembrane System • Series of organelles responsible for: – Modifying protein chains into their final form – Synthesizing of lipids – Packaging of fully modified proteins and lipids into vesicles for export or use in the cell
  • 33. Endomembrane System • Endoplasmic Reticulum (ER) – Continuous with the outer membrane of the nuclear envelope – Two forms - smooth and rough • Transport vesicles • Golgi apparatus
  • 34. Endoplasmic Reticulum • Rough Endoplasmic Reticulum (RER) • Network of flattened membrane sacs create a “maze” • Ribosomes attached to the outside of the RER make it appear rough
  • 35. Endoplasmic Reticulum • Function RER • Where proteins are modified and packaged in transport vesicles for transport to the Golgi body
  • 36. Endomembrane System • Smooth ER (SER) – Tubular membrane structure – Continuous with RER – No ribosomes attached • Function SER – Synthesis of lipids (fatty acids, phospholipids, sterols..)
  • 37. Endomembrane System • Additional functions of the SER – In muscle cells, the SER stores calcium ions and releases them during muscle contractions – In liver cells, the SER detoxifies medications and alcohol
  • 38. Golgi Apparatus • Golgi Apparatus – Stack of flattened membrane sacs • Function Golgi apparatus – Completes the processing substances received from the ER – Sorts, tags and packages fully processed proteins and lipids in vesicles
  • 39. Golgi Apparatus – The proteins and lipids are modified as they pass through layers of the Golgi – Molecular tags are added to the fully modified substances • These tags allow the substances to be sorted and packaged appropriately. • Tags also indicate where the substance is to be shipped.
  • 40. Transport Vesicles • Transport Vesicles – Vesicle = small membrane bound sac – Transport modified proteins and lipids from the ER to the Golgi apparatus (and from Golgi to final destination)
  • 41. Endomembrane System • Putting it all together – DNA directs RNA synthesis  RNA exits nucleus through a nuclear pore  ribosome  protein is made  proteins with proper code enter RER  proteins are modified in RER and lipids are made in SER  vesicles containing the proteins and lipids bud off from the ER
  • 42. Endomembrane System • Putting it all together ER vesicles merge with Golgi body  proteins and lipids enter Golgi  each is fully modified as it passes through layers of Golgi  modified products are tagged, sorted and bud off in Golgi vesicles  …
  • 43. Endomembrane System • Putting it all together  Golgi vesicles either merge with the plasma membrane and release their contents OR remain in the cell and serve a purpose
  • 44. Vesicles • Vesicles - small membrane bound sacs – Examples • Golgi and ER transport vesicles • Peroxisome – Where fatty acids are metabolized – Where hydrogen peroxide is detoxified • Lysosome
  • 45. Lysosomes • The lysosome is an example of an organelle made at the Golgi apparatus. – Golgi packages digestive enzymes in a vesicle. The vesicle remains in the cell and: • Digests unwanted or damaged cell parts • Merges with food vacuoles and digest the contents
  • 46. Mitochondria (4.15) • Function – synthesis of ATP – 3 major pathways involved in ATP production 1. Glycolysis 2. Krebs Cycle 3. Electron transport system (ETS)
  • 47. Mitochondria • Structure: – ~1-5 microns – Outer membrane – Inner membrane - Highly folded • Folds called cristae – Intermembrane space (or outer compartment) – Matrix • DNA and ribosomes in matrix
  • 49. Cytoskeleton (4.16, 4.17) • Function – gives cells internal organization, shape, ability to move and polarity • Structure – Interconnected system of microtubules, microfilaments, and intermediate filaments • All are proteins
  • 51. Cell Junctions • Plasma membrane proteins connect neighboring cells - called cell junctions – Plant cells – plasmodesmata provide channels between cells
  • 52. Cell Junctions (4.18) • 3 types of cell junctions in animal cells 1. Tight junctions 2. Anchoring junctions 3. Gap junctions
  • 53. Cell Junctions 1. Tight junctions – membrane proteins seal neighboring cells so that water soluble substances cannot cross between them • Seen between stomach cells
  • 54. Cell Junctions 2. Anchoring junctions – cytoskeleton fibers join cells in tissues that need to stretch • See between heart, skin, and muscle cells 3. Gap junctions – membrane proteins on neighboring cells link to form channels • This links the cytoplasm of adjoining cells
  • 55. Tight junction Anchoring junction Gap junction
  • 56. Cell specialization Specialized cell Function Modification Muscle cell Contraction Myofilaments Pancreatic acinar cell Synthesis and secretion of RER enzymes Kidney tubular cells Ion transport Basal membrane infoldings Macrophages Intracellular digestion Lysosomes Sensory cells Transformation of stimuli Membrane receptors into nerve impulses Leydig Testicular cells Synthesis and secretion of SER testosterone
  • 57. Tissues • Tissues are collection of cells that subserve specific function • Four fundamental types: – Epithelial – Supporting – Propulsion – Nervous – Composed of cells, intercellular matrix and tissue fluid
  • 58. Scope of microscopic Anatomy • Cytology • Histology • Organology
  • 59. The end.... • “ No man should marry until he has studied anatomy and dissected at least one woman” Honore de Balzac Thank you!!