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Biological Systems Engineering Laboratory (BSEL)




“Development of ex-vivo three-dimensional model
     of chronic lymphocytic leukemia (CLL)”

               SAIFUL IRWAN ZUBAIRI
            SUPERVISOR: Dr. Sakis Mantalaris
          CO-SUPERVISOR: Dr. Nicki Panoskaltsis
Outlines
 Introduction
 An ideal scaffold?
 Aims & objectives
 Experimental setup
 Results
 Future works
 Conclusion

             Biological Systems Engineering Laboratory (BSEL)
Introduction
Polyhydroxyalkanoates (PHAs) → a family of biopolyesters → bacteria →
intracellular carbon & energy-storage compounds.

Tissue engineering materials → GOOD → physical properties, biodegradability &
biocompatibility.

Poly(3-hydroxybutyrate) (PHB) & poly(3-hydroxybutyrate-co-3-hydroxyvalerate)
(PHBV) → biomaterials → in vitro & in vivo studies

> 150 types → PHAs → various monomers

Types of bacterium & growth conditions → chemical composition → PHAs & Mw
→ 2×105 to 3×106 Da.
   ×          ×

3 classes → (sclPHA, C3 - C5) → (mclPHA, C6 - C14) → (lclPHA, >C14).
                         Biological Systems Engineering Laboratory (BSEL)
Molecular structure of PHB and PHBV

                                3                1


                                                                    2
Source: http://biopol.free.fr



 m = STRUCTURE BACKBONE = 1, 2, 3, etc. m = 1 is the most common
 n = 100 - 30,000 monomers.                                  3-HB

 R is a variable: Types of homo-polymers in the PHAs family.
m = 1, R = CH3, → 3-hydroxybutyrate (3-HB)
m = 1, R = C2H5, → 3-hydroxyvalerate (3-HV)

                                                     3-HB + 3-HV
The Role of PHAs in Tissue Engineering

                 2                                    1




    Williams et al. International Journal of Biological Macromolecules, (1999)

                        Biological Systems Engineering Laboratory (BSEL)
The Potential Use of PHAs in Medicine




                                                                TO DATE

Zinn et al. Advanced Drug Delivery Reviews, 2001

The approval of TephaFLEX Absorbable suture by FDA which derived from a type of PHA named
poly-4-hydroxybutyrate (P-4HB) for the use in the surgical applications (Dai et al. 2009)
                                     Biological Systems Engineering Laboratory (BSEL)
An Ideal Scaffold for
     the T.E.R.M.?
An ideal scaffold should possess the following characteristics to bring about the
desired biological response (Liu, W. & Y. Cao, 2007):
  The scaffold → inter-connecting pores → tissue integration &
  vascularisation process.
  Material → biodegradability/bio-resorbability.
  Surface chemistry → cellular attachment, differentiation & proliferation.
  Mechanical properties → intended site of implantation & handling.
  Be easily fabricated into a variety of shapes & sizes.


Biological Systems Engineering Laboratory (BSEL)                   Tubes derived from PHOH film (left) and porous PHOH
                                                                   (right) - Williams et al. (1999)
Aim 1
 “To fabricate a novel porous 3-D scaffolds with an improved thickness (more
than 2 mm) using the Solvent-Casting Particulate-Leaching (SCPL) technique”

                               Objectives
         (1) Polymer concentrations with respect to homogenization time
                                         ↓
   (2) Polymer concentrations with respect to polymeric porous 3-D scaffolds
                                    thickness
                                         ↓
  (3) Efficacy of Solvent-Casting Particulate-Leaching (SCPL) via conductivity
                              (mS/cm) measurement
                                         ↓
(4) Effect of sodium chloride (Sigma-Aldrich) residual in polymeric porous 3-D
                        scaffolds on the cell growth media


                        Biological Systems Engineering Laboratory (BSEL)
Aim 2
“To characterize the physico-chemical of polymeric porous 3-D scaffolds
            with an improved thickness (more than 2 mm)”

                            Objectives
   (1) Analysis of porosity/surface area/PSD/void volume/roughness
                                    ↓
         (2) Analysis of pores size and interconnectivity using
                  scanning electron microscopy (SEM)
                                    ↓
    (3) Contact angle and surface free energy of dry PHB and PHBV
                          porous 3-D scaffolds


                     Biological Systems Engineering Laboratory (BSEL)
Porogen residual effect Vs. growth media

         Experimental Setup                                                                                     Efficacy of SCPL
    The solvent-casting and particulate-leaching (SCPL)
                                                                                                      Polymer concentration vs. thickness

     Polymer solution in                                       Solvent evaporation
                                                             (Complied with UK-SED,                       Polymer concentration vs. time
     organic solvent
                                                                2002: <20 mg/m3)               Porogen-DIW
                                Polymer solution                                                 leaching
                                                                                                                  FABRICATION        A
                                + Porogen                         3
                                                                                                4
                                              2
                            1                                                                                      Porous 3-D
                                                                                                                    scaffolds
                                                        Polymer +                Polymer +
                                                        Solvent +               Porogen cast
                                                       Porogen cast                                                       B
    Porogen (i.e., NaCl,                                                                                      PHYSICO-CHEMICAL
    sucrose etc.)

                                                                                                                                Porosity analysis
Advantages: Simple → fairly reproducible method →            Roughness analysis
no sophisticated apparatus → controlled porosity &
interconnectivity.
                                                       Contact angle and surface free energy
Disadvantages: Thickness limitations → structures
generally isotropic & angular → hazardous solvent →
lack of pores interconnectivity → limited mechanical
properties → residual of porogen and solvent
                                                                                               Pores size and interconnectivity using SEM

                                              Biological Systems Engineering Laboratory (BSEL)
“RESULTS:
 PART A”

Biological Systems Engineering Laboratory (BSEL)
Polymer concentrations with respect to homogenization time




                  Biological Systems Engineering Laboratory (BSEL)
Polymer concentrations with respect to polymeric 3-D scaffolds thickness
Polymer concentrations with respect to polymer 3-D scaffolds thickness
Polymer concentrations with respect to polymer 3-D scaffolds thickness
Polymer concentrations with respect to polymer 3-D scaffolds thickness




            PHB 4% (w/v)                               PHBV 4% (w/v)




                                                PHBV 4% (w/v)
            PHB 4% (w/v)                      ∼10 mm
                                                         ∼10 mm



                                                          ∼5 mm
Efficacy of Solvent-Casting Particulate-Leaching (SCPL) via
conductivity (mS/cm) measurement




                                                                             100       Source: http://www.4oakton.com
                                                                             90
                                                                             80




                                                   Conduc tiv ity (mS/c m)
                                                                             70
                                                                             60
                                                                             50                                 y = 2.8475x + 8.5027
                                                                             40                                      R2 = 0.9999
                                                                             30
                                                                             20
                                                                             10
                                                                              0
                                                                                   0     5       10       15        20        25       30   35
                                                                                                  Concentration of NaCl (mg/ml)

“Mass balance of sodium chloride were calculated
after the leaching and lyophilization process”
                                Biological Systems Engineering Laboratory (BSEL)
Effect of sodium chloride (Sigma-Aldrich) residual
in polymeric porous 3-D scaffolds on cell growth
media




  The effect of sodium chloride residual inside PHB and PHBV porous 3-D scaffolds on the cell growth media
  measured by pH changes. The polymeric porous 3-D scaffolds were submerged in the cell growth media (90%
  IMDM+10% FBS+1% PS) and incubated at 37 oC, and 5% CO2 (n = 3) for 7 days. NS indicates no significant
  differences as compared to control.

                               Biological Systems Engineering Laboratory (BSEL)
“RESULTS:
 PART B”

Biological Systems Engineering Laboratory (BSEL)
Physical properties of polymeric porous 3-D scaffolds
Pores size and interconnectivity analysis using scanning electron microscopy (SEM)

 PHB 4% (w/v)                              PHB 4% (w/v) - enlarged




 PHBV 4% (w/v)                            PHBV 4% (w/v) - enlarged
Wettability and surface energy of polymeric porous 3-D scaffolds




                     (a, b) Schematic of a simple derivation of Young’s equation using surface tension vectors for a
                     liquid on a solid substances (ideal solid surfaces). (c) Wenzel’s model of non-ideal solid surfaces
“CONCLUSIONS”


   Biological Systems Engineering Laboratory (BSEL)
Polymer concentration of 4% (w/v) for PHB and PHBV → ideal concentration →
thickness of porous 3-D scaffolds → more than 2 mm.

The insignificant → pH values → cell growth media Vs. control → insignificant
amount of porogen residual remained.

No contaminants/residual → No effect on the in vitro cell proliferation studies.

Both polymeric porous 3-D scaffolds → highly hydrophobic materials.

Lack of pores interconnectivity and highly hydrophobicity of the surfaces
→ EXPECTED → low degree of cell attachment and proliferation.

Modifying its surface chemistries → polymer surface becomes chemically more
homogeneous (smoothing effect) → physically more pores interconnectivity were
created → functionalization with oxygen-containing groups into hydrophilic surfaces
→ allow better cell attachment and proliferation




                          Biological Systems Engineering Laboratory (BSEL)
“FUTURE WORKS”


   Biological Systems Engineering Laboratory (BSEL)
Biological Systems Engineering Laboratory (BSEL)
“THANK YOU FOR
   YOUR KIND
  ATTENTION”


   Biological Systems Engineering Laboratory (BSEL)
Question:
1.   Why the thickness of 5-mm? ANS: (1) Previous studies show that the thickness of 5-
     mm was the optimum level for the cell-depth penetration to be occurred - Problem could
     occurred if >5-mm e.g.: no nutrient, oxygen and waste could be transported across the
     scaffolds – this could trigger apostosis (programmed cell death) due to the starvation. (2)
     Since our aim to mimic the BM micro-environment for transplanting HSC into the leukemia
     BM, we’re aiming to mimic the thickness as similar to the human BM. Thickness of human
     BM in reticular (resembling a net in form; netlike) connective tissue area which consist of
     a complex sinusoidal system (arterial vascular system) + hematopoietic cells + stroma
     (non-hemato).
2.   Novelty of your research? – Can fabricate 3-D scaffolds with an improved thickness of
     more than 2 mm – Up the extent of our knowledge - none of the studies produce 3-D
     scaffolds with thickness than 2 mm with this particular type of biopolyesters – most of
     them are at the µm size.
3.   Why PHB and PHBV? Why not PU, PP and others? – This polymers can be
     synthesized – waste/renewable sources – to become as added value product – for the
     application of leukemia treatment
OMIT SLIDES
Weight fraction and ratio of materials and chemicals
in fabricating polymeric porous 3-D scaffolds of
Solvent-Casting Particulate-Leaching (SCPL)




   As the salt weight fraction increased from 60% to 90% (w/w), the porosities increased
   gradually from 0.69 to 0.90 and porosities are homogenous with interconnected pores -
   [Lu et al. (2000) & Mikos (1994)]


                              Biological Systems Engineering Laboratory (BSEL)
World’s Manufacturer of PHB & PHBV - May 2010




Gurieff, N. and P. Lant, Comparative life cycle
assessment and financial analysis of mixed culture
polyhydroxyalkanoate production. Bioresource
Technology, 2007. 98(17): p. 3393-3403.
In vitro degradation studies for PHB and PHBV porous 3-D scaffolds - PBS & cell
                                     growth media.
                                          ↓
  Mechanical testing (compressive moduli): Untreated & immersion porous 3-D
                   scaffolds with cell growth media (4 wks & 8 wks)
                                          ↓
Surface treatment via O2 rf-plasma or alkaline treatment Vs. cellular proliferation
                                   studies (2 weeks).
                                          ↓
Surface modification via immersion freeze-dried coating with 2 types of BM main
            proteins (collagen type I & fibronectin) Vs. cellular proliferation
                                   studies (2 weeks).
                                          ↓
Modeling the abnormal hematopoietic 3-D culture system for short- and long-term
                             of 4 and 8 weeks respectively.



                          Biological Systems Engineering Laboratory (BSEL)

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2nd BSEL Group Meeting Presentation

  • 1. Biological Systems Engineering Laboratory (BSEL) “Development of ex-vivo three-dimensional model of chronic lymphocytic leukemia (CLL)” SAIFUL IRWAN ZUBAIRI SUPERVISOR: Dr. Sakis Mantalaris CO-SUPERVISOR: Dr. Nicki Panoskaltsis
  • 2. Outlines Introduction An ideal scaffold? Aims & objectives Experimental setup Results Future works Conclusion Biological Systems Engineering Laboratory (BSEL)
  • 3. Introduction Polyhydroxyalkanoates (PHAs) → a family of biopolyesters → bacteria → intracellular carbon & energy-storage compounds. Tissue engineering materials → GOOD → physical properties, biodegradability & biocompatibility. Poly(3-hydroxybutyrate) (PHB) & poly(3-hydroxybutyrate-co-3-hydroxyvalerate) (PHBV) → biomaterials → in vitro & in vivo studies > 150 types → PHAs → various monomers Types of bacterium & growth conditions → chemical composition → PHAs & Mw → 2×105 to 3×106 Da. × × 3 classes → (sclPHA, C3 - C5) → (mclPHA, C6 - C14) → (lclPHA, >C14). Biological Systems Engineering Laboratory (BSEL)
  • 4. Molecular structure of PHB and PHBV 3 1 2 Source: http://biopol.free.fr m = STRUCTURE BACKBONE = 1, 2, 3, etc. m = 1 is the most common n = 100 - 30,000 monomers. 3-HB R is a variable: Types of homo-polymers in the PHAs family. m = 1, R = CH3, → 3-hydroxybutyrate (3-HB) m = 1, R = C2H5, → 3-hydroxyvalerate (3-HV) 3-HB + 3-HV
  • 5. The Role of PHAs in Tissue Engineering 2 1 Williams et al. International Journal of Biological Macromolecules, (1999) Biological Systems Engineering Laboratory (BSEL)
  • 6. The Potential Use of PHAs in Medicine TO DATE Zinn et al. Advanced Drug Delivery Reviews, 2001 The approval of TephaFLEX Absorbable suture by FDA which derived from a type of PHA named poly-4-hydroxybutyrate (P-4HB) for the use in the surgical applications (Dai et al. 2009) Biological Systems Engineering Laboratory (BSEL)
  • 7. An Ideal Scaffold for the T.E.R.M.? An ideal scaffold should possess the following characteristics to bring about the desired biological response (Liu, W. & Y. Cao, 2007): The scaffold → inter-connecting pores → tissue integration & vascularisation process. Material → biodegradability/bio-resorbability. Surface chemistry → cellular attachment, differentiation & proliferation. Mechanical properties → intended site of implantation & handling. Be easily fabricated into a variety of shapes & sizes. Biological Systems Engineering Laboratory (BSEL) Tubes derived from PHOH film (left) and porous PHOH (right) - Williams et al. (1999)
  • 8. Aim 1 “To fabricate a novel porous 3-D scaffolds with an improved thickness (more than 2 mm) using the Solvent-Casting Particulate-Leaching (SCPL) technique” Objectives (1) Polymer concentrations with respect to homogenization time ↓ (2) Polymer concentrations with respect to polymeric porous 3-D scaffolds thickness ↓ (3) Efficacy of Solvent-Casting Particulate-Leaching (SCPL) via conductivity (mS/cm) measurement ↓ (4) Effect of sodium chloride (Sigma-Aldrich) residual in polymeric porous 3-D scaffolds on the cell growth media Biological Systems Engineering Laboratory (BSEL)
  • 9. Aim 2 “To characterize the physico-chemical of polymeric porous 3-D scaffolds with an improved thickness (more than 2 mm)” Objectives (1) Analysis of porosity/surface area/PSD/void volume/roughness ↓ (2) Analysis of pores size and interconnectivity using scanning electron microscopy (SEM) ↓ (3) Contact angle and surface free energy of dry PHB and PHBV porous 3-D scaffolds Biological Systems Engineering Laboratory (BSEL)
  • 10. Porogen residual effect Vs. growth media Experimental Setup Efficacy of SCPL The solvent-casting and particulate-leaching (SCPL) Polymer concentration vs. thickness Polymer solution in Solvent evaporation (Complied with UK-SED, Polymer concentration vs. time organic solvent 2002: <20 mg/m3) Porogen-DIW Polymer solution leaching FABRICATION A + Porogen 3 4 2 1 Porous 3-D scaffolds Polymer + Polymer + Solvent + Porogen cast Porogen cast B Porogen (i.e., NaCl, PHYSICO-CHEMICAL sucrose etc.) Porosity analysis Advantages: Simple → fairly reproducible method → Roughness analysis no sophisticated apparatus → controlled porosity & interconnectivity. Contact angle and surface free energy Disadvantages: Thickness limitations → structures generally isotropic & angular → hazardous solvent → lack of pores interconnectivity → limited mechanical properties → residual of porogen and solvent Pores size and interconnectivity using SEM Biological Systems Engineering Laboratory (BSEL)
  • 11. “RESULTS: PART A” Biological Systems Engineering Laboratory (BSEL)
  • 12. Polymer concentrations with respect to homogenization time Biological Systems Engineering Laboratory (BSEL)
  • 13. Polymer concentrations with respect to polymeric 3-D scaffolds thickness
  • 14. Polymer concentrations with respect to polymer 3-D scaffolds thickness
  • 15. Polymer concentrations with respect to polymer 3-D scaffolds thickness
  • 16. Polymer concentrations with respect to polymer 3-D scaffolds thickness PHB 4% (w/v) PHBV 4% (w/v) PHBV 4% (w/v) PHB 4% (w/v) ∼10 mm ∼10 mm ∼5 mm
  • 17. Efficacy of Solvent-Casting Particulate-Leaching (SCPL) via conductivity (mS/cm) measurement 100 Source: http://www.4oakton.com 90 80 Conduc tiv ity (mS/c m) 70 60 50 y = 2.8475x + 8.5027 40 R2 = 0.9999 30 20 10 0 0 5 10 15 20 25 30 35 Concentration of NaCl (mg/ml) “Mass balance of sodium chloride were calculated after the leaching and lyophilization process” Biological Systems Engineering Laboratory (BSEL)
  • 18. Effect of sodium chloride (Sigma-Aldrich) residual in polymeric porous 3-D scaffolds on cell growth media The effect of sodium chloride residual inside PHB and PHBV porous 3-D scaffolds on the cell growth media measured by pH changes. The polymeric porous 3-D scaffolds were submerged in the cell growth media (90% IMDM+10% FBS+1% PS) and incubated at 37 oC, and 5% CO2 (n = 3) for 7 days. NS indicates no significant differences as compared to control. Biological Systems Engineering Laboratory (BSEL)
  • 19. “RESULTS: PART B” Biological Systems Engineering Laboratory (BSEL)
  • 20. Physical properties of polymeric porous 3-D scaffolds
  • 21. Pores size and interconnectivity analysis using scanning electron microscopy (SEM) PHB 4% (w/v) PHB 4% (w/v) - enlarged PHBV 4% (w/v) PHBV 4% (w/v) - enlarged
  • 22. Wettability and surface energy of polymeric porous 3-D scaffolds (a, b) Schematic of a simple derivation of Young’s equation using surface tension vectors for a liquid on a solid substances (ideal solid surfaces). (c) Wenzel’s model of non-ideal solid surfaces
  • 23. “CONCLUSIONS” Biological Systems Engineering Laboratory (BSEL)
  • 24. Polymer concentration of 4% (w/v) for PHB and PHBV → ideal concentration → thickness of porous 3-D scaffolds → more than 2 mm. The insignificant → pH values → cell growth media Vs. control → insignificant amount of porogen residual remained. No contaminants/residual → No effect on the in vitro cell proliferation studies. Both polymeric porous 3-D scaffolds → highly hydrophobic materials. Lack of pores interconnectivity and highly hydrophobicity of the surfaces → EXPECTED → low degree of cell attachment and proliferation. Modifying its surface chemistries → polymer surface becomes chemically more homogeneous (smoothing effect) → physically more pores interconnectivity were created → functionalization with oxygen-containing groups into hydrophilic surfaces → allow better cell attachment and proliferation Biological Systems Engineering Laboratory (BSEL)
  • 25. “FUTURE WORKS” Biological Systems Engineering Laboratory (BSEL)
  • 26. Biological Systems Engineering Laboratory (BSEL)
  • 27. “THANK YOU FOR YOUR KIND ATTENTION” Biological Systems Engineering Laboratory (BSEL)
  • 28. Question: 1. Why the thickness of 5-mm? ANS: (1) Previous studies show that the thickness of 5- mm was the optimum level for the cell-depth penetration to be occurred - Problem could occurred if >5-mm e.g.: no nutrient, oxygen and waste could be transported across the scaffolds – this could trigger apostosis (programmed cell death) due to the starvation. (2) Since our aim to mimic the BM micro-environment for transplanting HSC into the leukemia BM, we’re aiming to mimic the thickness as similar to the human BM. Thickness of human BM in reticular (resembling a net in form; netlike) connective tissue area which consist of a complex sinusoidal system (arterial vascular system) + hematopoietic cells + stroma (non-hemato). 2. Novelty of your research? – Can fabricate 3-D scaffolds with an improved thickness of more than 2 mm – Up the extent of our knowledge - none of the studies produce 3-D scaffolds with thickness than 2 mm with this particular type of biopolyesters – most of them are at the µm size. 3. Why PHB and PHBV? Why not PU, PP and others? – This polymers can be synthesized – waste/renewable sources – to become as added value product – for the application of leukemia treatment
  • 30. Weight fraction and ratio of materials and chemicals in fabricating polymeric porous 3-D scaffolds of Solvent-Casting Particulate-Leaching (SCPL) As the salt weight fraction increased from 60% to 90% (w/w), the porosities increased gradually from 0.69 to 0.90 and porosities are homogenous with interconnected pores - [Lu et al. (2000) & Mikos (1994)] Biological Systems Engineering Laboratory (BSEL)
  • 31. World’s Manufacturer of PHB & PHBV - May 2010 Gurieff, N. and P. Lant, Comparative life cycle assessment and financial analysis of mixed culture polyhydroxyalkanoate production. Bioresource Technology, 2007. 98(17): p. 3393-3403.
  • 32. In vitro degradation studies for PHB and PHBV porous 3-D scaffolds - PBS & cell growth media. ↓ Mechanical testing (compressive moduli): Untreated & immersion porous 3-D scaffolds with cell growth media (4 wks & 8 wks) ↓ Surface treatment via O2 rf-plasma or alkaline treatment Vs. cellular proliferation studies (2 weeks). ↓ Surface modification via immersion freeze-dried coating with 2 types of BM main proteins (collagen type I & fibronectin) Vs. cellular proliferation studies (2 weeks). ↓ Modeling the abnormal hematopoietic 3-D culture system for short- and long-term of 4 and 8 weeks respectively. Biological Systems Engineering Laboratory (BSEL)