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Supporting the complex requirements of aSupporting the complex requirements of a
long-term project for whole brain emulationlong-term project for whole brain emulation
Dr. Randal A. KoeneDr. Randal A. Koene
Carboncopies.orgCarboncopies.org
MTA2014
OVERVIEW
Brief Basics + Rationale for
WBE
Success of Long-Term
Project with Complex
Requirements
Proposed Method &
Example from Experience
A Piece-Wise, Sustainable
Path to WBE
BASICS: TERMINOLOGY
http://koene.carboncopies.org
Objective: SIM
Substrate-Independent Mind
Feasible method: WBE
Whole Brain Emulation
Bio to WBE transfer:
“mind uploading”
BASICS: PURPOSE
In Search of Everything
Personal limitations
To Understand Everything
To Create Anything
Enhance & Expand
Capabilities: Need ACCESS
Brain Interfaces & ultimately
SIM give maximum access &
maximum flexibility
BASICS: ADAPTABILITY FOR
OUR SPECIES
Suitable for this
environment, this little
niche in time and space
Bigger picture perspective:
Many challenges we are not
at all suited for
Changes are coming, we
may even be causing them!
Species Survival & Species
Thriving require excellence
in adaptability
Responsibility to prepare our
species while we can
BASICS: REVERSE
ENGINEERING A MIND
Small Brain Prostheses
show it IS POSSIBLE:
Cochlea, Retina &
HIPPOCAMPUS
Hippocampus: Episodic
Memory
Biomimetic chip replaces
function
Works in rats (many
experiments), works in
monkeys
3 years to human trials!
Berger et al, USC
BASICS: SYSTEM
IDENTIFICATION
Unknown Sysem (bio / chip)
= black box with I/O
Know your goal, discover
relevant signals
(chip example: 1s & 0s)
Berger hippocampus:
assume “spike” times are
relevant: evidence in
sensory, motor & synaptic
change
Learn transfer function for
input spike patterns to
output spike patterns
NOT the same as a 'simulation'
that abstracts function
BASICS: WBE IS MANY
CONNECTED PROSTHESES
Whole Brain roadmap: Break
black box with 100B neurons
into many connected
sub-systems as feasible or
smaller than Berger's
Connections tell us how
sub-systems can interact
Characterize function within
each sub-system
Emulate dynamic function
representations
Test & Iteratively improve
Structure: Connectome
Proof-of-concept 2012
Function: each neuron?
Current Aim!
Emulation: model
platform
Application &
Validation
MISSION: LONG TERM &
MANY REQUIREMENTS
Tech. requirements to iterate
towards on 4 pillars
Actual R&D activitiy based
on short-term interests
Trends may not lead to goals
without a special effort
What may happen if other
trends dominate, e.g. AI?
MISSION:
CARBONCOPIES.ORG
Maintain a roadmap:
Know goals in terms of
requirements
+ actual activity / trends
Top-Down needs
Bottom-Up feasibility
Encourage meeting
requirements and filling
gaps by emphasizing /
starting specific activities
Big-picture vigilance: apply
where most needed
METHOD: EXAMPLE, 2013
FOCUS
High-resolution functional data
acquisition 'every neuron'
Boyden (MIT) to Silicon Valley
2012: Molecular Ticker Tape &
Brain Activity Map (BAM)
Carmena (UC Berkley) interest
in WBE, connect with Boyden:
joined BAM, ultrasound +
wireless probe at micron scales
PoBAM group: 'every neuron at
1ms' – BRAIN Initiative
METHOD: EXAMPLE,
PROTOTYPES EMERGING
'Neural Dust', 126um –
20um, 5um tail, ultrasound
power & communication
Animal trials in June 2014!
MIT/Harvard: similar, with
infrared 'RFID-like' system
Kording: bio-vector 'pulled'
nanowire array
Cross-disciplinary 'hybrid'
solutions toward a BrainNet
METHOD: EXAMPLE, BMI
STRATEGY
Long-term operational
interfaces to very large
number of neurons without
harm to the brain
Hi-Res BMI: In-Brain-Loop
Use data otherwise
inaccessible (sort memory)
Deliver data otherwise
impossible to generate
(parameter fitting, super
object recognition, etc.)
Needs to understand brain
circuit protocol (see Berger)
SUSTAINABLE: PIECE-WISE
TO WBE
Interfaces – Prostheses –
WBE more feasible than
'clean-room' path
Pieces, e.g. retina,
hippocampus & small whole
brains (drosophila 2018?)
Sustainably to WBE – if a
body attends to big-picture,
iteratively deciding nudges
SUSTAINABLE: INCENTIVES
FOR 'ARCHITECTING'
Architecting: e.g. PoBAM &
Carboncopies.org
Personal experience of
fragile support for
cross-disciplinary big-picture
(shared problem...)
Grant funding encourages
specialized silos
Investment encourages
short-term focus
Long-term success
probability linked to
robustness
Effort along multiple possible solutions
+
Sharing for hybrid solutions
SUSTAINABLE: ROBUST
MISSION DESIGN
No single points of failure:
● Technology
● Labs & People
● Resources for the work
Technology & Labs &
People well structured
Frailty of resources
continues to hamper
predictable architecting
(like carboncopies.org)
Robustness: A 2014 goal.
SUMMARIZING
SIM: Improve ourselves while we
improve our machines
Trends & exponential curves
don't automatically lead to goals
WBE monitored and nurtured:
WBE is now lab-accepted
Connectome proof-of-concept
PoBAM – functional access
5 years to fruitfly WBE project?
Robustness: Structural
improvements needed!
WBE Coffee Table Book

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Supporting the complex requirements of a long-term project for whole brain emulation

  • 1. Supporting the complex requirements of aSupporting the complex requirements of a long-term project for whole brain emulationlong-term project for whole brain emulation Dr. Randal A. KoeneDr. Randal A. Koene Carboncopies.orgCarboncopies.org MTA2014
  • 2. OVERVIEW Brief Basics + Rationale for WBE Success of Long-Term Project with Complex Requirements Proposed Method & Example from Experience A Piece-Wise, Sustainable Path to WBE
  • 3. BASICS: TERMINOLOGY http://koene.carboncopies.org Objective: SIM Substrate-Independent Mind Feasible method: WBE Whole Brain Emulation Bio to WBE transfer: “mind uploading”
  • 4. BASICS: PURPOSE In Search of Everything Personal limitations To Understand Everything To Create Anything Enhance & Expand Capabilities: Need ACCESS Brain Interfaces & ultimately SIM give maximum access & maximum flexibility
  • 5. BASICS: ADAPTABILITY FOR OUR SPECIES Suitable for this environment, this little niche in time and space Bigger picture perspective: Many challenges we are not at all suited for Changes are coming, we may even be causing them! Species Survival & Species Thriving require excellence in adaptability Responsibility to prepare our species while we can
  • 6. BASICS: REVERSE ENGINEERING A MIND Small Brain Prostheses show it IS POSSIBLE: Cochlea, Retina & HIPPOCAMPUS Hippocampus: Episodic Memory Biomimetic chip replaces function Works in rats (many experiments), works in monkeys 3 years to human trials! Berger et al, USC
  • 7. BASICS: SYSTEM IDENTIFICATION Unknown Sysem (bio / chip) = black box with I/O Know your goal, discover relevant signals (chip example: 1s & 0s) Berger hippocampus: assume “spike” times are relevant: evidence in sensory, motor & synaptic change Learn transfer function for input spike patterns to output spike patterns NOT the same as a 'simulation' that abstracts function
  • 8. BASICS: WBE IS MANY CONNECTED PROSTHESES Whole Brain roadmap: Break black box with 100B neurons into many connected sub-systems as feasible or smaller than Berger's Connections tell us how sub-systems can interact Characterize function within each sub-system Emulate dynamic function representations Test & Iteratively improve Structure: Connectome Proof-of-concept 2012 Function: each neuron? Current Aim! Emulation: model platform Application & Validation
  • 9. MISSION: LONG TERM & MANY REQUIREMENTS Tech. requirements to iterate towards on 4 pillars Actual R&D activitiy based on short-term interests Trends may not lead to goals without a special effort What may happen if other trends dominate, e.g. AI?
  • 10. MISSION: CARBONCOPIES.ORG Maintain a roadmap: Know goals in terms of requirements + actual activity / trends Top-Down needs Bottom-Up feasibility Encourage meeting requirements and filling gaps by emphasizing / starting specific activities Big-picture vigilance: apply where most needed
  • 11.
  • 12. METHOD: EXAMPLE, 2013 FOCUS High-resolution functional data acquisition 'every neuron' Boyden (MIT) to Silicon Valley 2012: Molecular Ticker Tape & Brain Activity Map (BAM) Carmena (UC Berkley) interest in WBE, connect with Boyden: joined BAM, ultrasound + wireless probe at micron scales PoBAM group: 'every neuron at 1ms' – BRAIN Initiative
  • 13. METHOD: EXAMPLE, PROTOTYPES EMERGING 'Neural Dust', 126um – 20um, 5um tail, ultrasound power & communication Animal trials in June 2014! MIT/Harvard: similar, with infrared 'RFID-like' system Kording: bio-vector 'pulled' nanowire array Cross-disciplinary 'hybrid' solutions toward a BrainNet
  • 14. METHOD: EXAMPLE, BMI STRATEGY Long-term operational interfaces to very large number of neurons without harm to the brain Hi-Res BMI: In-Brain-Loop Use data otherwise inaccessible (sort memory) Deliver data otherwise impossible to generate (parameter fitting, super object recognition, etc.) Needs to understand brain circuit protocol (see Berger)
  • 15. SUSTAINABLE: PIECE-WISE TO WBE Interfaces – Prostheses – WBE more feasible than 'clean-room' path Pieces, e.g. retina, hippocampus & small whole brains (drosophila 2018?) Sustainably to WBE – if a body attends to big-picture, iteratively deciding nudges
  • 16. SUSTAINABLE: INCENTIVES FOR 'ARCHITECTING' Architecting: e.g. PoBAM & Carboncopies.org Personal experience of fragile support for cross-disciplinary big-picture (shared problem...) Grant funding encourages specialized silos Investment encourages short-term focus Long-term success probability linked to robustness Effort along multiple possible solutions + Sharing for hybrid solutions
  • 17. SUSTAINABLE: ROBUST MISSION DESIGN No single points of failure: ● Technology ● Labs & People ● Resources for the work Technology & Labs & People well structured Frailty of resources continues to hamper predictable architecting (like carboncopies.org) Robustness: A 2014 goal.
  • 18. SUMMARIZING SIM: Improve ourselves while we improve our machines Trends & exponential curves don't automatically lead to goals WBE monitored and nurtured: WBE is now lab-accepted Connectome proof-of-concept PoBAM – functional access 5 years to fruitfly WBE project? Robustness: Structural improvements needed! WBE Coffee Table Book