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Gastrointestinal
Infections
Dr. Ashish V. Jawarkar, MD (Path)
Overview
• Most infections of the g.i.t. are acquired through
contaminated food – food poisoning
• Food infection –
− Bacteria like - Cholera, E. coli, Salmonella,
shigella,
− viruses like enterovirus, rotavirus, hepatitis A
and E
− Parasites like G. lamblia
• Food intoxication – S. aureus, B. cereus, Cl.
Perfringens, Cl. botulinum
Symptoms
• Abdominal pain
• Diarrhoea
• Vomitting
• Fever
Factors responsible for spread
• Age – children more susceptible
• Personal hygiene
• Open air defecation
• Food at road side stalls
• Uncovered food
Vibrio Cholerae
• Vibrio – vibrate – vibratory motility
• Present in surface waters worldwide
• Morphology
• Growth characteristics
• Biochemical reactions
• Resistance
• Pathogenicity and virulence
• Epidemiology
• Diseases caused
• Laboratory diagnosis
• Treatment
Morphology
• Short, curved comma shaped bacillus
• Single polar flagella
• Gram negative
• Morphology
• Growth characteristics
• Biochemical reactions
• Resistance
• Pathogenicity and virulence
• Epidemiology
• Diseases caused
• Laboratory diagnosis
• Treatment
Growth characteristics
• Aerobic
• Colorless colonies on mac conkey
• Special media
− Transport media
− Enrichment media
− Plating media
Transport media
• VR medium (Venkatraman, ramkrishnan)
• Cary blair medium
Enrichment media
• Alkaline peptone water
• Monsur’s taurocholate tellurite peptone
water
Plating media
• TCBS medium – thiosulfate, citrate, bile
salts and sucrose
String test
• Loopful of colonies mixed with drop of
sodium deoxycholate in saline
• Morphology
• Growth characteristics
• Biochemical reactions
• Resistance
• Pathogenicity and virulence
• Epidemiology
• Diseases caused
• Laboratory diagnosis
• Treatment
Biochemical reactions
• Cholera red reaction
− Ferments glucose, mannitol, maltose,
mannose and sucrose
− Produces indole which gives red color
• Morphology
• Growth characteristics
• Biochemical reactions
• Resistance
• Pathogenicity and virulence
• Epidemiology
• Diseases caused
• Laboratory diagnosis
• Treatment
Resistance
• Resistant to cold – refrigerated food may
carry vibrio
• Donot survive at room temperature /
heating
• Susceptible to common drugs like
doxycycline
• Morphology
• Growth characteristics
• Biochemical reactions
• Resistance
• Pathogenicity and virulence
• Epidemiology
• Diseases caused
• Laboratory diagnosis
• Treatment
Cholera
• Acute diarrhoeal illness
• Painless ‘rice water’ stools
• Copius vomitting
• Fluid loss and dehydration
• Due to two toxins released by bacteria in
intestine
• Toxin A and B
• Cause pouring of water from body into
intestines
• Extensive water depletion
• Morphology
• Growth characteristics
• Biochemical reactions
• Resistance
• Pathogenicity and virulence
• Epidemiology
• Laboratory diagnosis
• Treatment
Epidemiology
• Source – infected humans
• Mode of transmission – contaminated
water/food
• Cholera spreads as sporadic/epidemic or
pandemic forms
• Large movement of people such as during
fairs/festivals is associated with cholera
spread
Sporadic
• Short duration infection limited to a small
area
Epidemic
• Suddenly many cases are seen over a
large area
Pandemic
• Cases seen over a long period of time
over continents
• Till 19th century, cholera was mainly
confined to India – mainly area of Ganga
plains – Bengal
• Total seven pandemics have been
identified.
Seventh pandemic
• Morphology
• Growth characteristics
• Biochemical reactions
• Resistance
• Pathogenicity and virulence
• Epidemiology
• Laboratory diagnosis
• Treatment
Lab diagnosis
• Sample – stool – before administering
antibiotics
• Use transport medium
• Dark field microscopy can be done for
darting motility
• Plated on TCBS medium
• Slide agglutination test
• String test
• Morphology
• Growth characteristics
• Biochemical reactions
• Resistance
• Pathogenicity and virulence
• Epidemiology
• Laboratory diagnosis
• Treatment
Treatment
• More important is replacement of lost
fluid
• Antibiotics are of secondary importance
• Doxycycline
Enterobacteria
• Flora of large intestine
• Classified on basis of growth on Mac
Conkey’s medium
− Lactose fermenters – E. coli, Klebsiella
− Late lactose fermenters – shigella
− Non lactose fermenters - Salmonella
Diarrhoea causing E. Coli
ETEC

Toxin causes release
of water into
intestinal lumen

Watery diarrhoea

EIEC

Invade intestinal wall

Dysentry

Entero invasive E Coli

Blood and mucous in
stools

EHEC

Does not invade

Bloody diarrhoea

Entero hemorrhagic

Toxin release

Colitis

Entero toxicogenic
E Coli

EPEC
Entero pathogenic

Infant watery
diarrhoea
Gram negative rods
• E coli cause
−
−
−
−

UTI
Diarrhoea
Pyogenic infections
Septicemia

• Spread – feco oral route
Salmonella – Enteric Fever - Typhoid
• Also causes gastroenteritis
• Motile gram negative rods
• Peritrichous flagella
Salmonella – Enteric Fever - Typhoid
• Also causes gastroenteritis
• Motile gram negative rods
• Peritrichous flagella
Growth characteristics
• Colorless colonies on Mac conkey – Non
lactose fermenters
• Jet black colonies on Wilson and Blair due
to production of H2S
Growth characteristics
• Enrichment media
− Selenite F broth
− Tetrathionate broth
Diseases caused
• Enteric fever
• Gastroenteritis
• Septicemia
Enteric Fever (Typhoid)
• Pathogenesis
Clinical course
• Gradual onset with fever, abdominal pain
and constipation/diarrhoea
• Step ladder fever with bradycardia
• Spleen and liver are enarged
• Rose spots on skin in second week
Complications
• Intestinal perforation
• Hemorrhage
• Shock
• Cholecystitis
• Osteomyelitis
Epidemiology
• Source – food handlers/cooks
− Carriers –
• Convalescent carriers – shed bacilli for 3
weeks to 3 months after cure
• Chronic carriers – more than 3 months after
clinical cure
Typhoid Mary
• New york cook – infected more than 200
persons – caused atleast 7 outbreaks
Lab diagnosis
• Cases – Widal test, blood culture
• Carriers – isolation from bile
Widal test
Blood culture / Bile culture
• Take 45ml patient blood in bile broth
• Send to lab
• Cultured on Mac Conkey
• Lactose non fermenting colonies
Treatment
• Chloramphenicol
• Ampicillin
• Co trimoxazole
Prophylaxis
• Best is improved sanitation
• Live oral vaccine – typhoral
• Injectable vaccine – typhim vi
• Protection lasts 3 years, booster required
afterwards
Shigella – BACILLARY DYSENTRY
• DYSENTRY – bacillary (shigella) and
amebic (parasitic)
• Also caused by EIEC, Campylobacter
• Gram negative rods
• Lactose non fermenters on Mac conkey
• Classified according to mannitol
fermentation
− Sh dysenteriae – mannitol non fermenter
− Sh flexneri, sh bodydii and sh sonnei –
mannitol fermeters
Bacillary dysentry
• Bacilli infect intestinal epithelial cells
• Spread to submucosa
• Inflammatory reaction with capillary
thrombosis
• Sloughing and necrosis of mucosa
• Ulcers
Gastrointestinal infections - bacteriology
Gastrointestinal infections - bacteriology
Gastrointestinal infections - bacteriology

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Gastrointestinal infections - bacteriology

  • 2. Overview • Most infections of the g.i.t. are acquired through contaminated food – food poisoning • Food infection – − Bacteria like - Cholera, E. coli, Salmonella, shigella, − viruses like enterovirus, rotavirus, hepatitis A and E − Parasites like G. lamblia • Food intoxication – S. aureus, B. cereus, Cl. Perfringens, Cl. botulinum
  • 3. Symptoms • Abdominal pain • Diarrhoea • Vomitting • Fever
  • 4. Factors responsible for spread • Age – children more susceptible • Personal hygiene • Open air defecation • Food at road side stalls • Uncovered food
  • 5. Vibrio Cholerae • Vibrio – vibrate – vibratory motility • Present in surface waters worldwide
  • 6. • Morphology • Growth characteristics • Biochemical reactions • Resistance • Pathogenicity and virulence • Epidemiology • Diseases caused • Laboratory diagnosis • Treatment
  • 7. Morphology • Short, curved comma shaped bacillus • Single polar flagella • Gram negative
  • 8.
  • 9.
  • 10. • Morphology • Growth characteristics • Biochemical reactions • Resistance • Pathogenicity and virulence • Epidemiology • Diseases caused • Laboratory diagnosis • Treatment
  • 11. Growth characteristics • Aerobic • Colorless colonies on mac conkey • Special media − Transport media − Enrichment media − Plating media
  • 12. Transport media • VR medium (Venkatraman, ramkrishnan) • Cary blair medium
  • 13. Enrichment media • Alkaline peptone water • Monsur’s taurocholate tellurite peptone water
  • 14. Plating media • TCBS medium – thiosulfate, citrate, bile salts and sucrose
  • 15. String test • Loopful of colonies mixed with drop of sodium deoxycholate in saline
  • 16. • Morphology • Growth characteristics • Biochemical reactions • Resistance • Pathogenicity and virulence • Epidemiology • Diseases caused • Laboratory diagnosis • Treatment
  • 17. Biochemical reactions • Cholera red reaction − Ferments glucose, mannitol, maltose, mannose and sucrose − Produces indole which gives red color
  • 18. • Morphology • Growth characteristics • Biochemical reactions • Resistance • Pathogenicity and virulence • Epidemiology • Diseases caused • Laboratory diagnosis • Treatment
  • 19. Resistance • Resistant to cold – refrigerated food may carry vibrio • Donot survive at room temperature / heating • Susceptible to common drugs like doxycycline
  • 20. • Morphology • Growth characteristics • Biochemical reactions • Resistance • Pathogenicity and virulence • Epidemiology • Diseases caused • Laboratory diagnosis • Treatment
  • 21. Cholera • Acute diarrhoeal illness • Painless ‘rice water’ stools • Copius vomitting • Fluid loss and dehydration
  • 22.
  • 23. • Due to two toxins released by bacteria in intestine • Toxin A and B • Cause pouring of water from body into intestines • Extensive water depletion
  • 24. • Morphology • Growth characteristics • Biochemical reactions • Resistance • Pathogenicity and virulence • Epidemiology • Laboratory diagnosis • Treatment
  • 25. Epidemiology • Source – infected humans • Mode of transmission – contaminated water/food • Cholera spreads as sporadic/epidemic or pandemic forms • Large movement of people such as during fairs/festivals is associated with cholera spread
  • 26. Sporadic • Short duration infection limited to a small area
  • 27. Epidemic • Suddenly many cases are seen over a large area
  • 28. Pandemic • Cases seen over a long period of time over continents • Till 19th century, cholera was mainly confined to India – mainly area of Ganga plains – Bengal • Total seven pandemics have been identified.
  • 30.
  • 31. • Morphology • Growth characteristics • Biochemical reactions • Resistance • Pathogenicity and virulence • Epidemiology • Laboratory diagnosis • Treatment
  • 32. Lab diagnosis • Sample – stool – before administering antibiotics • Use transport medium • Dark field microscopy can be done for darting motility
  • 33.
  • 34. • Plated on TCBS medium • Slide agglutination test • String test
  • 35. • Morphology • Growth characteristics • Biochemical reactions • Resistance • Pathogenicity and virulence • Epidemiology • Laboratory diagnosis • Treatment
  • 36. Treatment • More important is replacement of lost fluid • Antibiotics are of secondary importance • Doxycycline
  • 37. Enterobacteria • Flora of large intestine • Classified on basis of growth on Mac Conkey’s medium − Lactose fermenters – E. coli, Klebsiella − Late lactose fermenters – shigella − Non lactose fermenters - Salmonella
  • 38.
  • 39. Diarrhoea causing E. Coli ETEC Toxin causes release of water into intestinal lumen Watery diarrhoea EIEC Invade intestinal wall Dysentry Entero invasive E Coli Blood and mucous in stools EHEC Does not invade Bloody diarrhoea Entero hemorrhagic Toxin release Colitis Entero toxicogenic E Coli EPEC Entero pathogenic Infant watery diarrhoea
  • 41. • E coli cause − − − − UTI Diarrhoea Pyogenic infections Septicemia • Spread – feco oral route
  • 42. Salmonella – Enteric Fever - Typhoid • Also causes gastroenteritis • Motile gram negative rods • Peritrichous flagella
  • 43. Salmonella – Enteric Fever - Typhoid • Also causes gastroenteritis • Motile gram negative rods • Peritrichous flagella
  • 44.
  • 45. Growth characteristics • Colorless colonies on Mac conkey – Non lactose fermenters • Jet black colonies on Wilson and Blair due to production of H2S
  • 46. Growth characteristics • Enrichment media − Selenite F broth − Tetrathionate broth
  • 47. Diseases caused • Enteric fever • Gastroenteritis • Septicemia
  • 49.
  • 50.
  • 51. Clinical course • Gradual onset with fever, abdominal pain and constipation/diarrhoea • Step ladder fever with bradycardia • Spleen and liver are enarged • Rose spots on skin in second week
  • 52. Complications • Intestinal perforation • Hemorrhage • Shock • Cholecystitis • Osteomyelitis
  • 53. Epidemiology • Source – food handlers/cooks − Carriers – • Convalescent carriers – shed bacilli for 3 weeks to 3 months after cure • Chronic carriers – more than 3 months after clinical cure
  • 54. Typhoid Mary • New york cook – infected more than 200 persons – caused atleast 7 outbreaks
  • 55. Lab diagnosis • Cases – Widal test, blood culture • Carriers – isolation from bile
  • 57.
  • 58. Blood culture / Bile culture • Take 45ml patient blood in bile broth • Send to lab • Cultured on Mac Conkey • Lactose non fermenting colonies
  • 60. Prophylaxis • Best is improved sanitation • Live oral vaccine – typhoral • Injectable vaccine – typhim vi • Protection lasts 3 years, booster required afterwards
  • 61. Shigella – BACILLARY DYSENTRY • DYSENTRY – bacillary (shigella) and amebic (parasitic) • Also caused by EIEC, Campylobacter
  • 62. • Gram negative rods • Lactose non fermenters on Mac conkey • Classified according to mannitol fermentation − Sh dysenteriae – mannitol non fermenter − Sh flexneri, sh bodydii and sh sonnei – mannitol fermeters
  • 63. Bacillary dysentry • Bacilli infect intestinal epithelial cells • Spread to submucosa • Inflammatory reaction with capillary thrombosis • Sloughing and necrosis of mucosa • Ulcers

Hinweis der Redaktion

  1. Age; EPEC and rotovirus tend you affect young children Hygiene: fecooral Acidity: protective barrier, low inoculm Motility: expel the pathogens. Antimotility assoc with prolonged fever shedding shigella, complication c diff, HUS in ETEC Flora: ex cdiff