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Applied Ecology, Forest Pathogens

      Mike Jeger & Marco Pautasso*
              23 Nov 2009
        *marpauta at gmail.com



1. Phytophthora ramorum
2. P. cinnamomi
3. P. alni
4. Armillaria spp
5. Heterobasidion spp
6. Cronartium ribicola
7. Ophiostoma spp
Sudden oak death (Phytophthora ramorum)




Source: Center for Invasive Species Research, University of California at Riverside
Sudden Oak Death in California (Oct 2009)




Source: SOD Mapper (red: confirmed; orange: to be confirmed)
Phytophthora ramorum in Northern California




Source: www.suddenoakdeath.org
Phytophthora ramorum eradication in Oregon




from: Rizzo et al. (2005) Annual Reviews of Phytopathology, Photo: Clive Brasier
Spatial scale and
Sudden Oak Death




from: Condeso & Meentemeyer (2007) Journal of Ecology
and: Mascheretti et al. (2008) Molecular Ecology
Phytophthora ramorum in England & Wales




Source: DEFRA
Phytophthora ramorum: epidemic simulation




Source: Harwood et al. (2010) Ecological Modelling
Jarrah forest dieback in SW Australia
   due to Phytophthora cinnamomi




                       Source: CSIRO, Australia
Jarrah Forest
     Dieback
  (Phytopthora
   cinnamomi),
  SW Australia




Source: Department of
Conservation and Land
    Management,
  Western Australia
Phytophthora
 cinnamomi in
   Tasmania




Source: Department of
Primary Industries and
   Water, Tasmania,
      Australia
Dieback of Alnus
  incana, 2004,
 Southwestern
Rocky Mountains




 From: Worrall (2009)
    Plant Disease
Phytophthora
     surveys
    in Alaska
 (Alnus decline)




From: Adams et al. (2008)
Plant Management Network
Pinus radiata
mortality associated
with Phytophthora
 pinifolia sp. nov.,
       Chile




From: Duran et al.
(2008) Plant Pathology
Distribution of trees and stumps colonized by
Armillaria ostoyae at a campground in Colorado




   Worrall et al. (2004) Forest Ecology and Management
Distri-
bution of
genets of
Armillaria
  spp in
forests of
 Tessin
   (CH)



Prospero et
 al. (2003)
    New
Phytologist
Armillaria/Heterobasidion in the Swiss National Park




from: Bendel et al. (2007) Mycological Research
Coarse-scale population structure of pathogenic
     Armillaria, Blue Mountains, Oregon




Ferguson et al. (2003) Canadian Journal of Forest Research
Survey of Armillaria species in NY State




    Bludgett and Worrall (1992) Plant Disease
Survey of Armillaria species in NY State




Distribution of sites in New York State
in which Armillaria was found
(empty squares) and in which Armillaria
was not found (black triangles)

         Bludgett and Worrall (1992) Plant Disease
Armillaria records in
   New Zealand


 (A. limonea and A.
  novae-zelandiae)




     Source: ENSIS
   Forest Biosecurity,
     New Zealand
Distribution of
  Armillaria
    species
   in Japan




   Ota et al. (1998)
   Plant Disease
Global distribution of the Heterobasidion
 annosum complex (dark shaded areas)




                  light shaded areas = H. araucariae;
                        line drawing: H. insulare


From: Asiegbu et al. (2005) Molecular Plant Pathology
Decay caused by Heterobasidion on the surface
   of an Abies sachalinensis stump (Japan)




      From: Tokuda et al. (2007) Forest Pathology
Heterobasidion disease centre in a stand of Pinus
  sylvestris, thinned 40 years ago (Lithuania)




 From: Lygis (2005) Acta Universitatis Agriculturae Sueciae
Soil risk map for Heterobasidion annosum, SE USA




Source: Forest Service, United States Department of Agriculture
Tree infected by white pine blister rust
              (Cronartium ribicola)




Source: Natural Resources Canada, Canadian Forest Service
Urediniospores of blister rust (Cronartium
   ribicola) on the lower side of a Ribes leaf




Source: Natural Resources Canada, Canadian Forest Service
Source: Canadian Government, Taskforce on Invasive Species
White pine blister rust (Cronartium ribicola) surveys




Kearns & Jacobi (2007) Canadian Journal of Forest Research
White pine blister rust (Cronartium ribicola) surveys




Kearns & Jacobi (2007) Canadian Journal of Forest Research
Surveys of Ribes, alternate host of Cronartium ribicola




Kearns et al. (2008) Journal of the Torrey Botanical Society
A conceptual model of the interactions of
whitebark pine at the treeline with blister rust




    Tomback and Resler (2007) Physical Geography
Lifecycle of Dutch Elm Disease




From: Agrios (1988) Plant Pathology. 3rd ed.
China as the
   origin
  of Dutch
Elm Disease?




 Brasier (1990)
Plant Pathology
Quantitative epidemiology of Dutch Elm Disease




     Gibbs (1978) Annual Review of Phytopathology
Distribution of subspp novo-ulmi and americana




      Brasier & Kirk (2001) Mycological Research
Damage due to Ophiostoma novo-ulmi in Spain




  Source: Generalitat Valenciana, Conselleria de Medi
        Ambient, Aigua, Urbanisme i Habitage
Damage due to Ophiostoma novo-ulmi in Denmark




Source: Biopix, Denmark
Healthy elm trees in Princeton, New Jersey




Planted in the 1930's, these elm trees in Princeton, N.J., have not
   succumbed to Dutch elm disease. Source: NYTimes (2004)
References
Dehnen-Schmutz K, Holdenrieder O, Jeger MJ & Pautasso M (2010) Structural change in the international horticultural industry: some implications
for plant health. Scientia Horticulturae 125: 1-15
Harwood TD, Xu XM, Pautasso M, Jeger MJ & Shaw M (2009) Epidemiological risk assessment using linked network and grid based modelling:
Phytophthora ramorum and P. kernoviae in the UK. Ecological Modelling 220: 3353-3361
Holdenrieder O, Pautasso M, Weisberg PJ & Lonsdale D (2004) Tree diseases and landscape processes: the challenge of landscape pathology.
Trends in Ecology and Evolution 19, 8: 446-452
Jeger MJ & Pautasso M (2008) Comparative epidemiology of zoosporic plant pathogens. European Journal of Plant Pathology 122: 111-126
Lonsdale D, Pautasso M & Holdenrieder O (2008) Wood-decaying fungi in the forest: conservation needs and management options. European
Journal of Forest Research 127: 1-22
MacLeod A, Pautasso M, Jeger MJ & Haines-Young R (2010) Evolution of the international regulation of plant pests and challenges for future plant
health. Food Security 2: 49-70
Moslonka-Lefebvre M, Pautasso M & Jeger MJ (2009) Disease spread in small-size directed networks: epidemic threshold, correlation between
links to and from nodes, and clustering. J Theor Biol 260: 402-411
Moslonka-Lefebvre M, Finley A, Dorigatti I, Dehnen-Schmutz K, Harwood T, Jeger MJ, Xu XM, Holdenrieder O & Pautasso M (2011) Networks in
plant epidemiology: from genes to landscapes, countries and continents. Phytopathology 101: 392-403
Pautasso M (2009) Geographical genetics and the conservation of forest trees. Perspectives in Plant Ecology, Systematics & Evolution 11: 157-189
Pautasso M (2010) Worsening file-drawer problem in the abstracts of natural, medical and social science databases. Scientometrics 85: 193-202
Pautasso M et al (2010) Plant health and global change – some implications for landscape management. Biological Reviews 85: 729-755
Pautasso M, Holdenrieder O & Stenlid J (2005) Susceptibility to fungal pathogens of forests differing in tree diversity. In: Forest Diversity and
Function (Scherer-Lorenzen M, Koerner Ch & Schulze D, eds.). Ecol. Studies Vol. 176. Springer, Berlin, pp. 263-289
Pautasso M, Moslonka-Lefebvre M & Jeger MJ (2010) The number of links to and from the starting node as a predictor of epidemic size in small-
size directed networks. Ecological Complexity 7: 424-432
Pautasso M, Xu XM, Jeger MJ, Harwood T, Moslonka-Lefebvre M & Pellis L (2010) Disease spread in small-size directed trade networks: the role of
hierarchical categories. Journal of Applied Ecology 47: 1300-1309
Xu XM, Harwood TD, Pautasso M & Jeger MJ (2009) Spatio-temporal analysis of an invasive plant pathogen (Phytophthora ramorum) in England
and Wales. Ecography 32: 504-516

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Applied ecology: forest pathogens

  • 1. Applied Ecology, Forest Pathogens Mike Jeger & Marco Pautasso* 23 Nov 2009 *marpauta at gmail.com 1. Phytophthora ramorum 2. P. cinnamomi 3. P. alni 4. Armillaria spp 5. Heterobasidion spp 6. Cronartium ribicola 7. Ophiostoma spp
  • 2. Sudden oak death (Phytophthora ramorum) Source: Center for Invasive Species Research, University of California at Riverside
  • 3. Sudden Oak Death in California (Oct 2009) Source: SOD Mapper (red: confirmed; orange: to be confirmed)
  • 4. Phytophthora ramorum in Northern California Source: www.suddenoakdeath.org
  • 5. Phytophthora ramorum eradication in Oregon from: Rizzo et al. (2005) Annual Reviews of Phytopathology, Photo: Clive Brasier
  • 6. Spatial scale and Sudden Oak Death from: Condeso & Meentemeyer (2007) Journal of Ecology and: Mascheretti et al. (2008) Molecular Ecology
  • 7. Phytophthora ramorum in England & Wales Source: DEFRA
  • 8. Phytophthora ramorum: epidemic simulation Source: Harwood et al. (2010) Ecological Modelling
  • 9. Jarrah forest dieback in SW Australia due to Phytophthora cinnamomi Source: CSIRO, Australia
  • 10. Jarrah Forest Dieback (Phytopthora cinnamomi), SW Australia Source: Department of Conservation and Land Management, Western Australia
  • 11. Phytophthora cinnamomi in Tasmania Source: Department of Primary Industries and Water, Tasmania, Australia
  • 12. Dieback of Alnus incana, 2004, Southwestern Rocky Mountains From: Worrall (2009) Plant Disease
  • 13. Phytophthora surveys in Alaska (Alnus decline) From: Adams et al. (2008) Plant Management Network
  • 14.
  • 15.
  • 16. Pinus radiata mortality associated with Phytophthora pinifolia sp. nov., Chile From: Duran et al. (2008) Plant Pathology
  • 17. Distribution of trees and stumps colonized by Armillaria ostoyae at a campground in Colorado Worrall et al. (2004) Forest Ecology and Management
  • 18. Distri- bution of genets of Armillaria spp in forests of Tessin (CH) Prospero et al. (2003) New Phytologist
  • 19. Armillaria/Heterobasidion in the Swiss National Park from: Bendel et al. (2007) Mycological Research
  • 20. Coarse-scale population structure of pathogenic Armillaria, Blue Mountains, Oregon Ferguson et al. (2003) Canadian Journal of Forest Research
  • 21. Survey of Armillaria species in NY State Bludgett and Worrall (1992) Plant Disease
  • 22. Survey of Armillaria species in NY State Distribution of sites in New York State in which Armillaria was found (empty squares) and in which Armillaria was not found (black triangles) Bludgett and Worrall (1992) Plant Disease
  • 23. Armillaria records in New Zealand (A. limonea and A. novae-zelandiae) Source: ENSIS Forest Biosecurity, New Zealand
  • 24. Distribution of Armillaria species in Japan Ota et al. (1998) Plant Disease
  • 25. Global distribution of the Heterobasidion annosum complex (dark shaded areas) light shaded areas = H. araucariae; line drawing: H. insulare From: Asiegbu et al. (2005) Molecular Plant Pathology
  • 26. Decay caused by Heterobasidion on the surface of an Abies sachalinensis stump (Japan) From: Tokuda et al. (2007) Forest Pathology
  • 27. Heterobasidion disease centre in a stand of Pinus sylvestris, thinned 40 years ago (Lithuania) From: Lygis (2005) Acta Universitatis Agriculturae Sueciae
  • 28. Soil risk map for Heterobasidion annosum, SE USA Source: Forest Service, United States Department of Agriculture
  • 29. Tree infected by white pine blister rust (Cronartium ribicola) Source: Natural Resources Canada, Canadian Forest Service
  • 30. Urediniospores of blister rust (Cronartium ribicola) on the lower side of a Ribes leaf Source: Natural Resources Canada, Canadian Forest Service
  • 31. Source: Canadian Government, Taskforce on Invasive Species
  • 32. White pine blister rust (Cronartium ribicola) surveys Kearns & Jacobi (2007) Canadian Journal of Forest Research
  • 33. White pine blister rust (Cronartium ribicola) surveys Kearns & Jacobi (2007) Canadian Journal of Forest Research
  • 34. Surveys of Ribes, alternate host of Cronartium ribicola Kearns et al. (2008) Journal of the Torrey Botanical Society
  • 35. A conceptual model of the interactions of whitebark pine at the treeline with blister rust Tomback and Resler (2007) Physical Geography
  • 36. Lifecycle of Dutch Elm Disease From: Agrios (1988) Plant Pathology. 3rd ed.
  • 37. China as the origin of Dutch Elm Disease? Brasier (1990) Plant Pathology
  • 38. Quantitative epidemiology of Dutch Elm Disease Gibbs (1978) Annual Review of Phytopathology
  • 39. Distribution of subspp novo-ulmi and americana Brasier & Kirk (2001) Mycological Research
  • 40. Damage due to Ophiostoma novo-ulmi in Spain Source: Generalitat Valenciana, Conselleria de Medi Ambient, Aigua, Urbanisme i Habitage
  • 41. Damage due to Ophiostoma novo-ulmi in Denmark Source: Biopix, Denmark
  • 42. Healthy elm trees in Princeton, New Jersey Planted in the 1930's, these elm trees in Princeton, N.J., have not succumbed to Dutch elm disease. Source: NYTimes (2004)
  • 43. References Dehnen-Schmutz K, Holdenrieder O, Jeger MJ & Pautasso M (2010) Structural change in the international horticultural industry: some implications for plant health. Scientia Horticulturae 125: 1-15 Harwood TD, Xu XM, Pautasso M, Jeger MJ & Shaw M (2009) Epidemiological risk assessment using linked network and grid based modelling: Phytophthora ramorum and P. kernoviae in the UK. Ecological Modelling 220: 3353-3361 Holdenrieder O, Pautasso M, Weisberg PJ & Lonsdale D (2004) Tree diseases and landscape processes: the challenge of landscape pathology. Trends in Ecology and Evolution 19, 8: 446-452 Jeger MJ & Pautasso M (2008) Comparative epidemiology of zoosporic plant pathogens. European Journal of Plant Pathology 122: 111-126 Lonsdale D, Pautasso M & Holdenrieder O (2008) Wood-decaying fungi in the forest: conservation needs and management options. European Journal of Forest Research 127: 1-22 MacLeod A, Pautasso M, Jeger MJ & Haines-Young R (2010) Evolution of the international regulation of plant pests and challenges for future plant health. Food Security 2: 49-70 Moslonka-Lefebvre M, Pautasso M & Jeger MJ (2009) Disease spread in small-size directed networks: epidemic threshold, correlation between links to and from nodes, and clustering. J Theor Biol 260: 402-411 Moslonka-Lefebvre M, Finley A, Dorigatti I, Dehnen-Schmutz K, Harwood T, Jeger MJ, Xu XM, Holdenrieder O & Pautasso M (2011) Networks in plant epidemiology: from genes to landscapes, countries and continents. Phytopathology 101: 392-403 Pautasso M (2009) Geographical genetics and the conservation of forest trees. Perspectives in Plant Ecology, Systematics & Evolution 11: 157-189 Pautasso M (2010) Worsening file-drawer problem in the abstracts of natural, medical and social science databases. Scientometrics 85: 193-202 Pautasso M et al (2010) Plant health and global change – some implications for landscape management. Biological Reviews 85: 729-755 Pautasso M, Holdenrieder O & Stenlid J (2005) Susceptibility to fungal pathogens of forests differing in tree diversity. In: Forest Diversity and Function (Scherer-Lorenzen M, Koerner Ch & Schulze D, eds.). Ecol. Studies Vol. 176. Springer, Berlin, pp. 263-289 Pautasso M, Moslonka-Lefebvre M & Jeger MJ (2010) The number of links to and from the starting node as a predictor of epidemic size in small- size directed networks. Ecological Complexity 7: 424-432 Pautasso M, Xu XM, Jeger MJ, Harwood T, Moslonka-Lefebvre M & Pellis L (2010) Disease spread in small-size directed trade networks: the role of hierarchical categories. Journal of Applied Ecology 47: 1300-1309 Xu XM, Harwood TD, Pautasso M & Jeger MJ (2009) Spatio-temporal analysis of an invasive plant pathogen (Phytophthora ramorum) in England and Wales. Ecography 32: 504-516