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The Correlation Between Agouti Related
 Protein Expression and Dietary Intake
     within Zebrafish, Danio rerios

                            March 8, 2013

                               Kelly Giffey
                     W.F. West High School
Relevance
• Obesity Epidemic in the United States
  – Two/thirds population overweight
• 8.3% of population has diabetes
  – 25.8 million people in the US
     • Leading cause of death
        – More than smoking
     • Leads to complications:
        –   Heart disease
        –   Stroke
        –   High blood pressure
        –   Kidney Disease
        –   Nervous system disease
Background - Agouti-Related Protein
• AgRP gene found in humans and vertebrates.
  – Most production hypothalamus (brain)
  – Regulates eating response
     • Signals for hunger
Why We Feel Hunger?

stomach   Ghrelin


                                      AgRP
                                     Neuron




                      Melanocortin
                     HUNGRY!
                         3 or 4
                       Receptor
Why We Feel Satisfied?

Food Eaten           Leptin Secreted from fat tissue

                               AgRP Neuron
                                  STOP




        FULL!
         MC3R/MC4R
Effects of AgRP Overexpression
• High AgRP levels
  – Leads to hyperphagia
     • Excessive overeating
  – Overeating overtime causes obesity
     • Leads to other health complications
• Obese people and mice have higher levels of
  AgRP (Pan, 2005)
• Mice fed 20% less protein diet have higher AgRP
  expression (Pillot, 2011)
• After ghrelin injection to rats, AgRP mRNA levels
  rose (Kamegai, 2001)
Zebrafish Model Organism for AgRP
            Gene Expression
• Danio rerios – contain similar organs as
  humans
• AgRP protein synthesis occurs in
  hypothalamus
Purpose and Hypothesis


-To determine whether AgRP expression
increases in fish experiencing induced
starvation.

-Starved Zebrafish would have elevated
AgRP mRNA expression in the brain
compared normally fed fish.
Research Design Overview
• Two identical aquariums
  – Control Tank: 15 fish fed
    normal diet.
  – Experimental Tank: 15 fish
    fed with induced starvation.
• Manipulated Variable: Diet
• Responding Variable: AgRP expression levels
  as measured by qPCR.
Research Design
• The Study - over 9 days
• Three 3 day intervals
  – 5 fish taken from each tank at end of intervals
  – Fish were to be fed
     • Experimental - 2% of mass (tank 1)
     • Control - 4% of mass (tank 2)
  – Average fish mass 500 mg in both tanks
Fish Euthanization
• End of feeding cycles, 5 fish removed from
  both tanks
  – Placed into 2 separate beakers of water
Procedure Overview
       Tissue Dissection

        RNA Extraction

mRNA converted to cDNA (Reverse
        Transcription)

      cDNA used in RT-PCR
Results

18S Control Amp
  18S Control

     18S Control              AgRP

                   AgRP Amplified
                   Product



                               AgRP Gene
                               Expression
What do my Findings Indicate?
• RNA extraction and conversion to
  cDNA was successful
• Overall, AgRP expression in brain
  tissue low
• 18S highly expressed in brain
Conclusions
• It was originally hypothesized that the starved
  fish would have higher mRNA levels for AgRP.
• At this time results do not directly support the
  hypothesis
• However, additional research focus could
  eventually show that AgRP expression levels
  are directly related to food intake
Further Research
• If hypothalamus possible to dissect
  – AgRP could closely be examined
  – Evidence could result in determining role AgRP on
    regulating body weight
• 1st run, AgRP didn’t begin amplification until
  cycle 30
  – Very low level of transcript
  – Repeated gene expression experiment with higher
    DNA concentration.
Plate with Second Run AgRP
Further Research
• Even with a higher concentration it still
  yielded the same results.
• More severely starve the fish
  – Fish closer extreme starvation levels
• Time period increase
• Tissue Cell culture
Acknowledgements
• My Parents
• My advisors Henri Weeks and Mike Stratton
• David Cogan and Trish from Applied
  Biosystems

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Sigma Xi Kelly Giffey 2013

  • 1. The Correlation Between Agouti Related Protein Expression and Dietary Intake within Zebrafish, Danio rerios March 8, 2013 Kelly Giffey W.F. West High School
  • 2. Relevance • Obesity Epidemic in the United States – Two/thirds population overweight • 8.3% of population has diabetes – 25.8 million people in the US • Leading cause of death – More than smoking • Leads to complications: – Heart disease – Stroke – High blood pressure – Kidney Disease – Nervous system disease
  • 3. Background - Agouti-Related Protein • AgRP gene found in humans and vertebrates. – Most production hypothalamus (brain) – Regulates eating response • Signals for hunger
  • 4. Why We Feel Hunger? stomach Ghrelin AgRP Neuron Melanocortin HUNGRY! 3 or 4 Receptor
  • 5. Why We Feel Satisfied? Food Eaten Leptin Secreted from fat tissue AgRP Neuron STOP FULL! MC3R/MC4R
  • 6. Effects of AgRP Overexpression • High AgRP levels – Leads to hyperphagia • Excessive overeating – Overeating overtime causes obesity • Leads to other health complications • Obese people and mice have higher levels of AgRP (Pan, 2005) • Mice fed 20% less protein diet have higher AgRP expression (Pillot, 2011) • After ghrelin injection to rats, AgRP mRNA levels rose (Kamegai, 2001)
  • 7. Zebrafish Model Organism for AgRP Gene Expression • Danio rerios – contain similar organs as humans • AgRP protein synthesis occurs in hypothalamus
  • 8. Purpose and Hypothesis -To determine whether AgRP expression increases in fish experiencing induced starvation. -Starved Zebrafish would have elevated AgRP mRNA expression in the brain compared normally fed fish.
  • 9. Research Design Overview • Two identical aquariums – Control Tank: 15 fish fed normal diet. – Experimental Tank: 15 fish fed with induced starvation. • Manipulated Variable: Diet • Responding Variable: AgRP expression levels as measured by qPCR.
  • 10. Research Design • The Study - over 9 days • Three 3 day intervals – 5 fish taken from each tank at end of intervals – Fish were to be fed • Experimental - 2% of mass (tank 1) • Control - 4% of mass (tank 2) – Average fish mass 500 mg in both tanks
  • 11. Fish Euthanization • End of feeding cycles, 5 fish removed from both tanks – Placed into 2 separate beakers of water
  • 12. Procedure Overview Tissue Dissection RNA Extraction mRNA converted to cDNA (Reverse Transcription) cDNA used in RT-PCR
  • 13. Results 18S Control Amp 18S Control 18S Control AgRP AgRP Amplified Product AgRP Gene Expression
  • 14. What do my Findings Indicate? • RNA extraction and conversion to cDNA was successful • Overall, AgRP expression in brain tissue low • 18S highly expressed in brain
  • 15. Conclusions • It was originally hypothesized that the starved fish would have higher mRNA levels for AgRP. • At this time results do not directly support the hypothesis • However, additional research focus could eventually show that AgRP expression levels are directly related to food intake
  • 16. Further Research • If hypothalamus possible to dissect – AgRP could closely be examined – Evidence could result in determining role AgRP on regulating body weight • 1st run, AgRP didn’t begin amplification until cycle 30 – Very low level of transcript – Repeated gene expression experiment with higher DNA concentration.
  • 17. Plate with Second Run AgRP
  • 18. Further Research • Even with a higher concentration it still yielded the same results. • More severely starve the fish – Fish closer extreme starvation levels • Time period increase • Tissue Cell culture
  • 19. Acknowledgements • My Parents • My advisors Henri Weeks and Mike Stratton • David Cogan and Trish from Applied Biosystems

Hinweis der Redaktion

  1. Most of 18s transcripts began to amplify around cycle 15 where as the agrpmrna did not even begin to amplify until about cycle 35
  2. Since ribosomes are so necessary in all cells, the gene must be highly expressed and up regulated. This control proves that the brains were dissected, rna extracted, and cunverted to cDNA successfully because of the amplification of the 18s gene expression.
  3. If it was possible to specifically dissect the hypothalamus from the brain, AgRP might be able to be examined and analyzed more successfully. This could provide more conclusive evidence to determine the role of AgRP in regulating body weight.
  4. Unfortunately, there still was not enough AgRP amplification to draw any conclusions on the role of AgRP on regulating body weight. There was some amplification, but those that did amplify were from both Tank one and Tank two so it was challenging to draw any conclusions. For further, if I could find a positive control with a piece of tissue that is known to have high levels of AgRP mRNA expression, I could test the custom assay to make sure it was designed properly. The hypothalamus is known to have the highest levels of AgRP of the organs.