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DNA
Structure and Replication
DNA STRUCTURE
History of DNA
   Early on, protein thought as the cell’s hereditary material
   because it was more complex than DNA




Fred Griffith worked with virulent S and nonvirulent R strain Pneumoccocus bacteria.
He found that R strain could become virulent when it took in DNA from heat-killed S
strain
Study suggested that DNA was probably the genetic material
                                    copyright cmassengale                              3
History of DNA               Radioactive   32P   was injected into bacteria!

Chromosomes are made of both DNA and protein
Experiments on bacteriophage viruses by Hershey
& Chase proved that DNA was the cell’s genetic
material




      Discovery of DNA Structure
Erwin Chargaff showed the amounts of the four bases on
DNA ( A,T,C,G)
In a body or somatic cell:
       A = 30.3%
       T = 30.3%
       G = 19.5%
       C = 19.9%
                           copyright cmassengale                                            4
Chargaff’s Rule
  Adenine must pair with Thymine
  Guanine must pair with Cytosine
The bases form weak hydrogen bonds




T       A                            G   C




             copyright cmassengale           5
James Watson (L) and Francis
Crick (R), and the model they built of the
structure of DNA




                   AS Biology. Gnetic control of protein structure
Helix
Most DNA has a right-
hand twist with 10 base
pairs in a complete turn
Left twisted DNA is
called Z-DNA or
southpaw DNA
Hot spots occur where
right and left twisted
DNA meet producing
mutations


                    copyright cmassengale   7
The structure of DNA and RNA
 Genetic material of living organisms is either
 DNA or RNA.

  DNA – Deoxyribonucleic acid
  RNA – Ribonucleic acid

 Genes are lengths of DNA that code for
 particular proteins.
DNA and RNA are polynucleotides
       Both DNA and RNA are polynucleotides.
       They are made up of smaller molecules called
       nucleotides.
                                                                   Nucleotide


       DNA is made of two polynucleotide strands:
 Nucleotide    Nucleotide              Nucleotide                     Nucleotide     Nucleotide

 Nucleotide    Nucleotide              Nucleotide                     Nucleotide     Nucleotide



       RNA is made of a single polynucleotide strand:
  Nucleotide    Nucleotide                Nucleotide                    Nucleotide     Nucleotide




                            AS Biology. Gnetic control of protein structure
Structure of a nucleotide
2.A Phosphate group

   Phosphate groups                                    P
  are important
  because they link
  the sugar on one
  nucleotide onto the                                              S
  phosphate of the
  next nucleotide to
  make a
  polynucleotide.

                 AS Biology. Gnetic control of protein structure
Structure of a nucleotide
3. A Nitrogenous base

  In DNA the four bases are:                               P
     Thymine                                                              N-base
     Adenine
     Cytosine
     Guanine

  In RNA the four bases are:                                          S
     Uracil
     Adenine
     Cytosine
     Guanine




                    AS Biology. Gnetic control of protein structure
Sugar phosphate bonds (backbone of DNA)


 Nucleotides are
connected to each
other via the
phosphate on one
nucleotide and the
sugar on the next
nucleotide
 A Polynucleotide
Nitrogenous bases – Two types
   Pyrimidines                                               Purines
   Have single ring                                        Have double
                                                         rings of Carbon
                                                          and Nitrogen
 Thymine - T                                                  atom
 Cytosine - C
  Uracil - U                                      Adenine - A
                                                  Guanine - G
Base-Pairings: Purines only pair with Pyrimidines
                 AS Biology. Gnetic control of protein structure
Adenine




          AS Biology. Gnetic control of protein structure
Guanine




          AS Biology. Gnetic control of protein structure
Cytosine




           AS Biology. Gnetic control of protein structure
Base pairing
Sides made of a pentose
sugar deoxyribose
bonded to phosphate
(PO4) groups by
phosphodiester bonds
Center made of nitrogen
bases bonded together by
weak hydrogen bonds
   Adenine links with
   Thymine or Uracil by 2
   hydrogen bonds
   Cytosine links with
   Guanine by 3
   hydrogen bonds


                 AS Biology. Gnetic control of protein structure
AS Biology. Gnetic control of protein structure
AS Biology. Gnetic control of protein structure
Again:
Adenine always base pairs with Thymine (or Uracil if
RNA)

Cytosine always base pairs with Guanine.

This is because there is exactly enough room for one
purine and one pyrimidine base between the two
polynucleotide strands of DNA.
     Complementary Base Pairing
Nature of the Genetic Material

1. It must contain, in a stable form, information
encoding the organism’s structure, function,
development and reproduction
2. It must replicate accurately so progeny cells have
the same genetic makeup
3. It must be capable of some variation (mutation) to
permit evolution




                 AS Biology. Gnetic control of protein structure
DNA
     5       O                                           3




         3                                               O
P                                                            5           P
     5       O
                 1       G                       C           3
                                                     2
     4                                                               4
                 2                                   1
         3                                                           5
P                                                        O
                                                                         P
     5
                     T                 A                     3
             O


                                                         O
                                                                 5
P        3                                                               P
                         copyright cmassengale                               24
Antiparallel Strands
 One strand of DNA
goes from 5’ to 3’
(sugars)
 The other strand is
opposite in
direction going 3’
to 5’ (sugars)




                copyright cmassengale   25
Question:

  What would be the
 complementary DNA
 strand for the following
 DNA sequence?


 DNA 5’-CGTATG-3’

        copyright cmassengale   26
Answer:

DNA 5’-CGTATG-3’
DNA 3’-GCATAC-5’




     copyright cmassengale   27

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DNA Structure and Replication Explained

  • 3. History of DNA Early on, protein thought as the cell’s hereditary material because it was more complex than DNA Fred Griffith worked with virulent S and nonvirulent R strain Pneumoccocus bacteria. He found that R strain could become virulent when it took in DNA from heat-killed S strain Study suggested that DNA was probably the genetic material copyright cmassengale 3
  • 4. History of DNA Radioactive 32P was injected into bacteria! Chromosomes are made of both DNA and protein Experiments on bacteriophage viruses by Hershey & Chase proved that DNA was the cell’s genetic material Discovery of DNA Structure Erwin Chargaff showed the amounts of the four bases on DNA ( A,T,C,G) In a body or somatic cell: A = 30.3% T = 30.3% G = 19.5% C = 19.9% copyright cmassengale 4
  • 5. Chargaff’s Rule Adenine must pair with Thymine Guanine must pair with Cytosine The bases form weak hydrogen bonds T A G C copyright cmassengale 5
  • 6. James Watson (L) and Francis Crick (R), and the model they built of the structure of DNA AS Biology. Gnetic control of protein structure
  • 7. Helix Most DNA has a right- hand twist with 10 base pairs in a complete turn Left twisted DNA is called Z-DNA or southpaw DNA Hot spots occur where right and left twisted DNA meet producing mutations copyright cmassengale 7
  • 8. The structure of DNA and RNA Genetic material of living organisms is either DNA or RNA. DNA – Deoxyribonucleic acid RNA – Ribonucleic acid Genes are lengths of DNA that code for particular proteins.
  • 9. DNA and RNA are polynucleotides Both DNA and RNA are polynucleotides. They are made up of smaller molecules called nucleotides. Nucleotide DNA is made of two polynucleotide strands: Nucleotide Nucleotide Nucleotide Nucleotide Nucleotide Nucleotide Nucleotide Nucleotide Nucleotide Nucleotide RNA is made of a single polynucleotide strand: Nucleotide Nucleotide Nucleotide Nucleotide Nucleotide AS Biology. Gnetic control of protein structure
  • 10. Structure of a nucleotide 2.A Phosphate group Phosphate groups P are important because they link the sugar on one nucleotide onto the S phosphate of the next nucleotide to make a polynucleotide. AS Biology. Gnetic control of protein structure
  • 11. Structure of a nucleotide 3. A Nitrogenous base In DNA the four bases are: P Thymine N-base Adenine Cytosine Guanine In RNA the four bases are: S Uracil Adenine Cytosine Guanine AS Biology. Gnetic control of protein structure
  • 12. Sugar phosphate bonds (backbone of DNA) Nucleotides are connected to each other via the phosphate on one nucleotide and the sugar on the next nucleotide A Polynucleotide
  • 13. Nitrogenous bases – Two types Pyrimidines Purines Have single ring Have double rings of Carbon and Nitrogen Thymine - T atom Cytosine - C Uracil - U Adenine - A Guanine - G Base-Pairings: Purines only pair with Pyrimidines AS Biology. Gnetic control of protein structure
  • 14. Adenine AS Biology. Gnetic control of protein structure
  • 15. Guanine AS Biology. Gnetic control of protein structure
  • 16. Cytosine AS Biology. Gnetic control of protein structure
  • 17. Base pairing Sides made of a pentose sugar deoxyribose bonded to phosphate (PO4) groups by phosphodiester bonds Center made of nitrogen bases bonded together by weak hydrogen bonds Adenine links with Thymine or Uracil by 2 hydrogen bonds Cytosine links with Guanine by 3 hydrogen bonds AS Biology. Gnetic control of protein structure
  • 18.
  • 19. AS Biology. Gnetic control of protein structure
  • 20. AS Biology. Gnetic control of protein structure
  • 21.
  • 22. Again: Adenine always base pairs with Thymine (or Uracil if RNA) Cytosine always base pairs with Guanine. This is because there is exactly enough room for one purine and one pyrimidine base between the two polynucleotide strands of DNA. Complementary Base Pairing
  • 23. Nature of the Genetic Material 1. It must contain, in a stable form, information encoding the organism’s structure, function, development and reproduction 2. It must replicate accurately so progeny cells have the same genetic makeup 3. It must be capable of some variation (mutation) to permit evolution AS Biology. Gnetic control of protein structure
  • 24. DNA 5 O 3 3 O P 5 P 5 O 1 G C 3 2 4 4 2 1 3 5 P O P 5 T A 3 O O 5 P 3 P copyright cmassengale 24
  • 25. Antiparallel Strands One strand of DNA goes from 5’ to 3’ (sugars) The other strand is opposite in direction going 3’ to 5’ (sugars) copyright cmassengale 25
  • 26. Question: What would be the complementary DNA strand for the following DNA sequence? DNA 5’-CGTATG-3’ copyright cmassengale 26