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NUCLEIC ACIDS (DNA)
Structure and function
DNA STRUCTURE
DNA double helix structure
Helix
• Most DNA has a righthand twist with 10 base
pairs in a complete turn
• Left twisted DNA is
called Z-DNA or
southpaw DNA
• Hot spots occur where
right and left twisted
DNA meet producing
mutations

copyright cmassengale

4
The structure of DNA and RNA
• Genetic material of living organisms is either
DNA or RNA.
• DNA – Deoxyribonucleic acid
• RNA – Ribonucleic acid
• Genes are lengths of DNA that code for
particular proteins.
A BRIEF HISTORY ON NUCLEIC
ACID
• Frederich Meischer (1844-1895)
– Extracted pus from wounds and
bandages
– Isolated a substance from white blood
cells which he named “nuclein” (because
it was found in the nucleus of cells).
• Edmund Beecher Wilson (1856-1939)
– Establishes that “mother’s” nucleus contain the same
number of chromosomes as “father’s nucleus”, and
both are present in the offspring…
– Therefore half of the information is received from
each parent!
• Oscar Hertwig (1849-1922)
– Suggests nuclein is needed to inherit characteristics
from parents.

• Richard Altmann (1852-1900)
– Determines nuclein is actually acidic and changes
the name to “nucelic acid”
A picture of a DNA molecule using
Crystallography by Franklin
• Phoebus Aaron Levene (1869-1940)
– Suggested nucleic acids had
a highly repetitive sequence…
(although he could not describe
the repetition patterns)

• Albrecht Kossel (1853-1927)
– Worked with yeast (why?)
– Showed there were 2 types of nucleic acids
(and won a Nobel prize for this!)
So what are nucleic acids?
• There are 2 types:
– DNA
(deoxyribonucleic acid)
– RNA
(ribonucleic acid)

• Polymers
(i.e made of many
monomers joined ogether)
More about nucleic acids
• They are in charge of:

STORAGE

TRANSMISSION
USE
»Of genetic information
More on nucleic acids
• Composed of monomers called nucleotides

• Each nucleotide has:
– A pentose (5 carbon) sugar
– A phosphate group
– A nitrogen-containing base
More on nucleic acids (remember there
are 2 types: DNA and RNA)

DNA bases

RNA bases

Thymine (T)

Uracil (U)

Adenine (A)

Adenine (A)

Cytosine (C)

Cytosine (C)

Guanine (G)

Guanine (G)
Each nucleotide must have:
1. Phosphate group
2. A single sugar
A single base
pyrimidines

purines

DNA’s nucleotides
DNA is unique because of the
nucleotide sequence
• Only 4 nitrogenous bases – thus only 4
nucleotides are found in DNA

• What does this mean?
1. DNA sequences are unique
• Nucleotides can join to each other in 2 ways:
- As a sequence
- By complementary base pairing (not e shown below)

A

C

C

G

T

A

T

A

G

The sequence is called the “genetic code” and is
UNIQUE to each individual.
How do nucleotides join in a sequence?
•

Nucleotides can join through
covalent bonds between their

sugar group
AND
phosphate group

Forming the
sugar-phosphate backbone
bases are not involved directly in
this type of bonding.
Nitrogenous bases – Two types
Pyrimidines
• Have single ring

Thymine - T
Cytosine - C
Uracil - U

Purines
• Have double rings of
Carbon and Nitrogen
atom

Adenine - A
Guanine - G

Base-Pairings: Purines only pair with Pyrimidines
AS Biology. Gnetic control of protein structure and
2. Complementary base pairing
• RNA consists of a single strand, but DNA consists
of a double strand.
• In a double strand, BASES bond to each other.
• This IS NOT AT RANDOM, but occurs through
COMPLEMENTARY BASE PAIRING
• A purine will always
bond a pyrimidine.
Complementary base-pairing
A

T

C

G

Always
adenine – thymine
cytosine - guanine
Exercise: Which is the complementary
strand?
A

T

T

A

C

G

C

G

G

C

C

G

T

A
•

Hydrogen bonds
attach nucleotide
bases to each other,
and determine the
bases that CAN join
(i.e complementary
bases)

•

C and G make 3 H
bonds.

•

A and T make 2 H
bonds.
The hydrogen bonding is one of the causes leading a
DNA molecule to twist (like a double helix)

• This was
discovered by
James Watson
and Francis
Crick (both of
whom won a
Nobel Prize for
this).
The 2 strands run anti-parallel to each other
Questions:
1. Physically, why can’t a guanine (G) in one strand
bond with an adenine (A) in another strand?
 Guanine and Adenine are both

purines.
 This means they are slightly
larger molecules than Thymine
and Cytosine.
 If they pair up, the distance
between one strand and the other
is larger than the average, and
surrounding nucleotides could not
bond.
1. Physically, why can’t a guanine (G) in one strand
bond with an adenine (A) in another strand?
 Guanine

can
make 3 hydrogen
bonds, whereas Adenine can only make
2.
This makes the bonding unstable as
Guanine ends up with a “lose” end (nonbonded hydrogen)
Questions
2. Why does DNA “need” to have a “coiled”
shape?
DNA carries ALL the information
that makes up an organism.
It is present in EVERY nucleus
of EVERY cell of the organism.
(If DNA was extended side by
side, the DNA in our bodies would
be long enough to go around the
earth!)
By coiling DNA (in fact, SUPERCOILING it), DNA can actually fit
into the nucleus of each cell.
2. Why does DNA “need” to have a “coiled”
shape?
 DNA carries the hereditary information.
 By COILING it, the “strong” part
(sugar-phosphate backbone) is
exposed, rather than the bases.
 This confers some “protection” to the
information
Summary on DNA structure:
 DNA is a ______ helix.
 Each strand runs _____________ to the other.
 Alternating ______ and _________ molecules form a backbone
for each strand.
 The two strands backbone sugar and phosphate molecules are
held together by ___________ bonds.
 The two strands are held together by _________ bonds between
complementary base pairs.
 There are four nitrogenous bases: two _______, Adenine (A) and
Guanine (G) and two __________, Thymine (T) and Cytosine (C).
 Adenine and ________ always bond through 2 hydrogen bonds.
 Cytosine and _______ always bond through 3 hydrogen bonds.
SUMMERY ON DNA STRUCTURE:
 DNA is a double helix.
 Each strand runs anti-parallel to the other.
 Alternating sugar and phosphate molecules form a backbone for
each strand.
 The two strands backbone sugar and phosphate molecules are
held together by covalent bonds.
 The two strands are held together by hydrogen bonds between
complementary base pairs.
 There are four nitrogenous bases: two purines, Adenine (A) and
Guanine (G) and two pyrimidines, Thymine (T) and Cytosine (C).
 Adenine and Thymine always bond through 2 hydrogen bonds.
 Cytosine and Guanine always bond through 3 hydrogen bonds.
SO HOW DOES DNA

STORE
TRANSMIT

USE
genetic information?
REFERENCE
• Gavin40 accessed from
http://www.slideshare.net/gavin40/nucleic-acids29117862
• Ihmcbiology1213 accessed from
http://www.slideshare.net/ihmcbiology1213/dnastructure-15152681
• Campbell & Reece: Chapters, 5, 16.

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DNA Structure and Function Explained

  • 3. DNA double helix structure
  • 4. Helix • Most DNA has a righthand twist with 10 base pairs in a complete turn • Left twisted DNA is called Z-DNA or southpaw DNA • Hot spots occur where right and left twisted DNA meet producing mutations copyright cmassengale 4
  • 5. The structure of DNA and RNA • Genetic material of living organisms is either DNA or RNA. • DNA – Deoxyribonucleic acid • RNA – Ribonucleic acid • Genes are lengths of DNA that code for particular proteins.
  • 6. A BRIEF HISTORY ON NUCLEIC ACID • Frederich Meischer (1844-1895) – Extracted pus from wounds and bandages – Isolated a substance from white blood cells which he named “nuclein” (because it was found in the nucleus of cells).
  • 7. • Edmund Beecher Wilson (1856-1939) – Establishes that “mother’s” nucleus contain the same number of chromosomes as “father’s nucleus”, and both are present in the offspring… – Therefore half of the information is received from each parent!
  • 8. • Oscar Hertwig (1849-1922) – Suggests nuclein is needed to inherit characteristics from parents. • Richard Altmann (1852-1900) – Determines nuclein is actually acidic and changes the name to “nucelic acid”
  • 9. A picture of a DNA molecule using Crystallography by Franklin
  • 10. • Phoebus Aaron Levene (1869-1940) – Suggested nucleic acids had a highly repetitive sequence… (although he could not describe the repetition patterns) • Albrecht Kossel (1853-1927) – Worked with yeast (why?) – Showed there were 2 types of nucleic acids (and won a Nobel prize for this!)
  • 11. So what are nucleic acids? • There are 2 types: – DNA (deoxyribonucleic acid) – RNA (ribonucleic acid) • Polymers (i.e made of many monomers joined ogether)
  • 12. More about nucleic acids • They are in charge of: STORAGE TRANSMISSION USE »Of genetic information
  • 13. More on nucleic acids • Composed of monomers called nucleotides • Each nucleotide has: – A pentose (5 carbon) sugar – A phosphate group – A nitrogen-containing base
  • 14. More on nucleic acids (remember there are 2 types: DNA and RNA) DNA bases RNA bases Thymine (T) Uracil (U) Adenine (A) Adenine (A) Cytosine (C) Cytosine (C) Guanine (G) Guanine (G)
  • 15. Each nucleotide must have: 1. Phosphate group
  • 16. 2. A single sugar
  • 19. DNA is unique because of the nucleotide sequence • Only 4 nitrogenous bases – thus only 4 nucleotides are found in DNA • What does this mean?
  • 20. 1. DNA sequences are unique • Nucleotides can join to each other in 2 ways: - As a sequence - By complementary base pairing (not e shown below) A C C G T A T A G The sequence is called the “genetic code” and is UNIQUE to each individual.
  • 21. How do nucleotides join in a sequence? • Nucleotides can join through covalent bonds between their sugar group AND phosphate group Forming the sugar-phosphate backbone bases are not involved directly in this type of bonding.
  • 22. Nitrogenous bases – Two types Pyrimidines • Have single ring Thymine - T Cytosine - C Uracil - U Purines • Have double rings of Carbon and Nitrogen atom Adenine - A Guanine - G Base-Pairings: Purines only pair with Pyrimidines AS Biology. Gnetic control of protein structure and
  • 23. 2. Complementary base pairing • RNA consists of a single strand, but DNA consists of a double strand. • In a double strand, BASES bond to each other. • This IS NOT AT RANDOM, but occurs through COMPLEMENTARY BASE PAIRING • A purine will always bond a pyrimidine.
  • 25. Exercise: Which is the complementary strand? A T T A C G C G G C C G T A
  • 26. • Hydrogen bonds attach nucleotide bases to each other, and determine the bases that CAN join (i.e complementary bases) • C and G make 3 H bonds. • A and T make 2 H bonds.
  • 27. The hydrogen bonding is one of the causes leading a DNA molecule to twist (like a double helix) • This was discovered by James Watson and Francis Crick (both of whom won a Nobel Prize for this).
  • 28. The 2 strands run anti-parallel to each other
  • 29. Questions: 1. Physically, why can’t a guanine (G) in one strand bond with an adenine (A) in another strand?  Guanine and Adenine are both purines.  This means they are slightly larger molecules than Thymine and Cytosine.  If they pair up, the distance between one strand and the other is larger than the average, and surrounding nucleotides could not bond.
  • 30. 1. Physically, why can’t a guanine (G) in one strand bond with an adenine (A) in another strand?  Guanine can make 3 hydrogen bonds, whereas Adenine can only make 2. This makes the bonding unstable as Guanine ends up with a “lose” end (nonbonded hydrogen)
  • 31. Questions 2. Why does DNA “need” to have a “coiled” shape? DNA carries ALL the information that makes up an organism. It is present in EVERY nucleus of EVERY cell of the organism. (If DNA was extended side by side, the DNA in our bodies would be long enough to go around the earth!) By coiling DNA (in fact, SUPERCOILING it), DNA can actually fit into the nucleus of each cell.
  • 32. 2. Why does DNA “need” to have a “coiled” shape?  DNA carries the hereditary information.  By COILING it, the “strong” part (sugar-phosphate backbone) is exposed, rather than the bases.  This confers some “protection” to the information
  • 33. Summary on DNA structure:  DNA is a ______ helix.  Each strand runs _____________ to the other.  Alternating ______ and _________ molecules form a backbone for each strand.  The two strands backbone sugar and phosphate molecules are held together by ___________ bonds.  The two strands are held together by _________ bonds between complementary base pairs.  There are four nitrogenous bases: two _______, Adenine (A) and Guanine (G) and two __________, Thymine (T) and Cytosine (C).  Adenine and ________ always bond through 2 hydrogen bonds.  Cytosine and _______ always bond through 3 hydrogen bonds.
  • 34. SUMMERY ON DNA STRUCTURE:  DNA is a double helix.  Each strand runs anti-parallel to the other.  Alternating sugar and phosphate molecules form a backbone for each strand.  The two strands backbone sugar and phosphate molecules are held together by covalent bonds.  The two strands are held together by hydrogen bonds between complementary base pairs.  There are four nitrogenous bases: two purines, Adenine (A) and Guanine (G) and two pyrimidines, Thymine (T) and Cytosine (C).  Adenine and Thymine always bond through 2 hydrogen bonds.  Cytosine and Guanine always bond through 3 hydrogen bonds.
  • 35. SO HOW DOES DNA STORE TRANSMIT USE genetic information?
  • 36. REFERENCE • Gavin40 accessed from http://www.slideshare.net/gavin40/nucleic-acids29117862 • Ihmcbiology1213 accessed from http://www.slideshare.net/ihmcbiology1213/dnastructure-15152681 • Campbell & Reece: Chapters, 5, 16.