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Carolina Farm Stewardship Association
    2012 Sustainable Agriculture Conference

  Sustainable and Organic
  Approaches To Managing
Cucurbit and Tomato Diseases

        Anthony (Tony) Keinath
          Vegetable Pathologist
           Clemson University
              Coastal REC
             Charleston, SC
Today’s Outline
    Intro to Tomato and Cucurbit Diseases
        Important Pathogens
        Risks to Other Crops
    5 General Control Strategies
        Avoidance
        Eradication
    Recommendations for Specific Diseases
        “More of what works, less of what doesn’t”
Avoid extremes
“You can’t grow organic vegetables in the
  Southeast.”


“All diseases can be managed organically.”
Symptoms of Important Tomato
Diseases--Root
 Disease          Leaves Stem Crown Roots   Fruit
 Bacterial wilt    **    **     *     *      --
 Southern           --    --   **     *      (*)
 blight
 Fusarium wilt     **     *     --   (*)     --
 Root knot          --    --    --   **      --
Spread and Survival of Important
Tomato Pathogens--Root
                                Spread
                                 Rain            Survive in
 Disease     Organism    Wind   Splash   Water     Soil
 Bacterial   Bacterium    --      --      **        **
 wilt
 Southern    Fungus       --      --      --        **
 blight
 Fusarium    Fungus       --      --      --        **
 wilt
 Root knot   Nematode     --      --      --        **
Host Range of Important Tomato
Diseases--Root
                                               Other     Other     Br-Lf
Disease     Pepper Eggplant Potato Cucurbits   Veg.      Crops     Weeds
Bacterial    **       **      *        --        --      tobacco    *
wilt                                                    geranium

Fusarium      --      --      --       --        --        --       --
wilt
Southern     **       **      (*)     (*)      beans,               (*)
blight                                          sun      peanut
                                               choke
Root knot    **       **      **      **        ***       **        *
Symptoms of Important Tomato
Diseases--Foliar
Disease                Leaves Stem Crown   Roots   Fruit
Bacterial speck/spot    **    (*)   --      --      *
Gray leaf spot          **    --    --      --      --
Early blight            **     *    --      --      *
Late blight             **     *    --      --      **
Spotted wilt            **     *    --      --      **
Spread and Survival of Important
Tomato Pathogens--Foliar
                                                        Survive in
Disease        Organism    Wind   Rain Splash   Water     Soil
Bacterial      Bacterium    *         **         --         *
speck/spot
Gray leaf      Fungus                 **                   **
spot
Early blight   Fungus       *         *          --         *
Late blight    Water       **         *          --        (*)
               mold
Spotted wilt   Virus        --        --         --        --
Host Range of Important Tomato
Diseases--Foliar
                                                Other   Other     Br-Lf
Disease        Pepper Eggplant Potato Cucurbits Veg.    Crops     Weeds
Bacterial        **      --      --      --      --       --       --
speck/spot     (spot)
Gray leaf       **       (*)     --      --      --       --       *
spot
Early blight     --      (*)     **      --      --       --       (*)
Late blight      --      --      **      --      --     petunia    *
Spotted wilt    **       --      *       --      --      peanut    **
                                                        tobacco
The Disease Triangle
An Aid to Management



               Host
               Plant


               Disease

 Environment             Pathogen
The Disease Triangle for
Gummy Stem Blight




 Watermelon                Didymella



                Environment
Host Range of Important Cucurbit
Diseases
                                            Winter
                                     Summer Squash/
               Cuke Melon Watermelon Squash Pumpkin   Gourds
Downy
               **    **       *        *       **       *
mildew
Phytophthora    *     --     **       **       **       *
Powdery
                ?     *      **       **       *        *
mildew
Gummy
                *    **      **        --      *        *
stem blight
Anthracnose    **    (*)      *        --      *        **
Symptoms of Important Cucurbit
Diseases
 Disease              Leaves   Crown   Vine   Fruit
 Downy mildew           √
 Powdery mildew         √
 Phytophthora crown
                        √       √       √      √
 and fruit rot
 Gummy stem blight
                        √       √      (√)     √
 and black rot
 Anthracnose            √               √      √
Spread and Survival of Important
Cucurbit Pathogens
                                        Spread

                                         Rain        Survive
 Disease            Organism     Wind   Splash Water in Soil
 Downy mildew       Water Mold    **     (*)     --     --
 Powdery mildew      Fungus       **      --     --     --
 Phytophthora
                    Water Mold
 crown and fruit                  --      *      **    **
 rot
 Gummy stem
 blight and black    Fungus       *      **      --     *
 rot
 Anthracnose         Fungus      (*)     **      --     *
Diseases that Affect Both
Cucurbit and Tomato Crops
   Phytophthora               Southern blight
    crown and fruit rot            Tomato, pepper,
       Pepper, tomato,             eggplant
        eggplant                   Snap bean
       Snap and lima              Jerusalem artichoke
        beans                      Peanut
   Root knot
       Many broad-leaved
        crops
5 General Control
   Strategies
      Avoidance


     Protection


    Resistance

    Eradication

    Exclusion
Challenges with Spraying for Organic
Disease Control (Protection)
 Favorable environment
 Biopesticides usually less effective than
  conventional fungicides
       Powdery mildew is exception
   NOP allows S and Cu only as a last resort
       Protectants only
   Labels of biopesticides are inaccurate
What is AVOIDANCE?
    Preventing contact
     between pathogen
     and host to prevent
     disease.
    Modifying the
     environment to make
     it less favorable for
     disease.
    One of 2 main
     strategies for organic
     disease control.
    Warning: pathogen is
     still present!
Avoidance Techniques

         Change planting date


         Raise beds to prevent
              damping-off

       Avoid wetting leaves when
               watering


       Mulch to prevent fruit rots
Eradication: Length of Crop
Rotations
Foliar pathogens               Soilborne pathogens
   No long-term survival         Various survival
    structures                     structures
   Until infested debris is          Sclerotia
    gone                              Oospores
       ≤ 1 yr for bacteria
                                      Dormant mycelia
       1-3 yr for fungi and
                                  Cannot eradicate with
        water molds
                                   rotation
                                  Can reduce
                                   populations (=
                                   primary inoculum)
2 Crop Rotation and Planting
Schemes for Small Acreages
   For foliar diseases:         For root and wilt
      Spread crops in            diseases:
       same botanical               Group crops in
       family far apart              same botanical
         Slows pathogen             family together
          spread                    Rotate away for 3-4
   Disadvantage: Makes              years
    crop rotation difficult      Disadvantage: May
                                  increase foliar
                                  diseases in wet years
Foliar                          Soilborne
                            pathogens                       pathogens
Separate or Group Related



                             Tomato                          Solanaceous




                             Squash               Arugula      Cucurbits



                                       Eggplant
Crops?




                                          &
                            Broccoli              Cukes
                                        Pepper
                                                               Brassicas
Soil Solarization
                     Sterilizing soil by using
                    heat from the sun trapped
                    under clear plastic by the
                       “greenhouse effect”


                                        Solarize
                     Solarizing soil    potting
                     is PARTIALLY        soil in
                        effective         clear
                                         plastic
                                       bags 2 wk
                                 8
                    Use 2     weeks
                    layers      in
                    plastic   June-
                               July
Composting to Eliminate
Pathogens
   Eradication of                      Nematodes   Fungi   Seeds
    pathogens in plant                  180
    debris                              160
                                    D
   To be safe:                     e 140
      Peak temperatures            g 120
       147-158 F. for 21            r 100
       days                         e
                                       80
                                    e
            Difficult to achieve
                                    s 60
             in 1-cu-ft pile
                                         40
   Survived:                       F
                                         20
       Fusarium wilt of
        tomato                            0
General Cultural Practices to Avoid
Disease on All Crops
          Reduce leaf wetness
          •Drip irrigation
          •Increase row/plant spacing
          •Avoid edges of woods
          •Row orientation


          Improve soil drainage
          • Raised beds
          • Add organic matter
            • Compost
            • Cover crops
Controlling Vegetable Diseases-
General Organic Techniques
    Bacteria                       Fungi (true)
        Reduce leaf wetness            Copper does not work
        One- to two-year               Sulfur is better option
         rotation                   Water molds
        Copper                      (oomycetes)
    Root diseases and                  Copper
     nematodes                          Potassium phosphite
        Improve soil drainage               Not organic certified
        Increase organic
         matter
        Resistance
General Cultural Practices to
Manage Tomato Diseases
          Grafting
          •Root knot
          •Southern blight
          •Fusarium wilt
          •Bacterial wilt
          •(awaytogarden.com)


          High Tunnels
         • Prevent fruit cracking
         • Reduce foliar disease
         • Extend season
         • (hightunnel.org, Kansas State)
Resistant Tomato Varieties
Resistance Available     No Resistance
 Spotted wilt              Bacterial spot
 Early blight              Bacterial wilt
 Root knot                 Southern blight
 Late blight
     ‘Mountain Magic’
      (campari type)        Resistance in All
     ‘Plum Regal’           Hybrids
                            Gray leaf spot
                            Fusarium wilt
                                Except grapes
Gray Leaf Spot
 ‘Cherokee Purple’ is v. susceptible
 2-3 year rotation
 Avoid planting tomato and pepper next to
  each other
 Early planting
       Disease is favored by high temp and humidity
Phytophthora crown and fruit rot
Phytophthora capsici
Sporangia—                    Oospore—
•   Form on infected plants   • Forms in/on fruit
•   Spread by/in water        •   Survives in soil
Controlling Phytophthora
crown and fruit rot—
Water management
       Raised beds
       • Cut water furrows
       • Don’t punch holes too deeply


       Do not use surface water


       Drip irrigation


       Avoid planting low areas
Controlling Phytophthora
crown and fruit rot—
Soil management

        Mulch--Plastic or organic


        Wash equipment
        • Between fields
        • Newly purchased or borrowed



        Remove cull fruit
Cucurbit Downy Mildew
Controlling Cucurbit Downy
Mildew
          Copper sprays
          • On crops other than
            cucumber

          Avoidance
          • Early planting date


          Resistance
          • C. maxima
          • Cucumber cultivars
          • Tolerant
            • ‘Aladdin’ pumpkin
            • Some summer squash cv.
Cucurbit Powdery Mildew
Controlling Cucurbit Powdery
Mildew
         Biopesticides—spray top and bottom
         of leaves
         • Organocide (fish oil + sesame oil)
         • Potassium bicarbonate
         • JMS Stylet Oil or horticultural oil

         Sulfur
         • Do not apply at 90ºF




         Resistant summer and winter
         squash and pumpkin cultivars
         from Harris Seeds
Gummy Stem Blight
Anthracnose
Survival of the GSB Fungus in
                                   Cantaloupe Crowns

                                     Nov 05       May 06    Nov 06         May 07     Nov 07                                      100




                                                                                               % Crowns with viable D. bryoniae
                                                                                                                                            Soil surface
% Crowns with viable D. bryoniae




                                                                                                                                   90       Plastic mulch
                                   100
                                                                             Soil surface                                          80       Buried 5 in.
                                    90                                       Plastic mulch
                                    80                                                                                             70
                                    70                                                                                             60
                                    60                                                                                             50
                                    50
                                                                                                                                   40
                                    40
                                                                                                                                   30
                                    30
                                    20                                                                                             20
                                    10                                                                                             10
                                     0                                                                                             0
                                         0    10 20 30 40 50 60 70 80 90 100                                                            0   10        20        30     40        50   60   70
                                                      Weeks after burial                                                                                    Weeks after burial
Controlling Gummy Stem Blight
and Anthracnose
         Rotate for 3 years
         • Summer squash in 2nd or 3rd year


         Plant early


         Disease-free transplants


         Do not reuse plastic mulch

        Disk fields to bury debris as soon as
        possible after harvest
Managing Fusarium Wilt of
Watermelon
   Resistant cultivars
       Only resist. to race 1
   Grafting onto
    bottlegourd or hybrid
    squash
       Both are susceptible
        to root knot                Crop rotation to
   Hairy vetch as winter            reduce build-up of
    cover crop/green                 pathogen
    manure                              Works best before
                                         soil is infested
Managing Bacterial Fruit
Blotch
 See conventional
  guidelines
 Only exception is
  avoid use of
  Actigard
Managing Cucurbit Viruses
Spread by Aphids
   Resistant cultivars
       Check if conventional
        or GM
   Horticultural oil
    sprays
       Every other day
       Prevent infection
   Camouflage
       Rye grass between
        rows
   Kaolin clay sprays
Sustainable Disease
Management
  Organic soil           Cultural
  management             practices                 Check plants
  • Cover crops          • Exclude,                 weekly for
  • Crop rotation        • Eliminate and            problems
  • Compost              • Avoid disease




                                           Identify diseases to
                    Apply                  select the best
                 biopesticides             control method
                preventatively             •Bacterium or fungus?
                                           •Water mold or true
                                            fungus?

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Cfsa cucurbits and tomatoes 2012

  • 1. Carolina Farm Stewardship Association 2012 Sustainable Agriculture Conference Sustainable and Organic Approaches To Managing Cucurbit and Tomato Diseases Anthony (Tony) Keinath Vegetable Pathologist Clemson University Coastal REC Charleston, SC
  • 2. Today’s Outline  Intro to Tomato and Cucurbit Diseases  Important Pathogens  Risks to Other Crops  5 General Control Strategies  Avoidance  Eradication  Recommendations for Specific Diseases  “More of what works, less of what doesn’t”
  • 3. Avoid extremes “You can’t grow organic vegetables in the Southeast.” “All diseases can be managed organically.”
  • 4. Symptoms of Important Tomato Diseases--Root Disease Leaves Stem Crown Roots Fruit Bacterial wilt ** ** * * -- Southern -- -- ** * (*) blight Fusarium wilt ** * -- (*) -- Root knot -- -- -- ** --
  • 5. Spread and Survival of Important Tomato Pathogens--Root Spread Rain Survive in Disease Organism Wind Splash Water Soil Bacterial Bacterium -- -- ** ** wilt Southern Fungus -- -- -- ** blight Fusarium Fungus -- -- -- ** wilt Root knot Nematode -- -- -- **
  • 6. Host Range of Important Tomato Diseases--Root Other Other Br-Lf Disease Pepper Eggplant Potato Cucurbits Veg. Crops Weeds Bacterial ** ** * -- -- tobacco * wilt geranium Fusarium -- -- -- -- -- -- -- wilt Southern ** ** (*) (*) beans, (*) blight sun peanut choke Root knot ** ** ** ** *** ** *
  • 7. Symptoms of Important Tomato Diseases--Foliar Disease Leaves Stem Crown Roots Fruit Bacterial speck/spot ** (*) -- -- * Gray leaf spot ** -- -- -- -- Early blight ** * -- -- * Late blight ** * -- -- ** Spotted wilt ** * -- -- **
  • 8. Spread and Survival of Important Tomato Pathogens--Foliar Survive in Disease Organism Wind Rain Splash Water Soil Bacterial Bacterium * ** -- * speck/spot Gray leaf Fungus ** ** spot Early blight Fungus * * -- * Late blight Water ** * -- (*) mold Spotted wilt Virus -- -- -- --
  • 9. Host Range of Important Tomato Diseases--Foliar Other Other Br-Lf Disease Pepper Eggplant Potato Cucurbits Veg. Crops Weeds Bacterial ** -- -- -- -- -- -- speck/spot (spot) Gray leaf ** (*) -- -- -- -- * spot Early blight -- (*) ** -- -- -- (*) Late blight -- -- ** -- -- petunia * Spotted wilt ** -- * -- -- peanut ** tobacco
  • 10. The Disease Triangle An Aid to Management Host Plant Disease Environment Pathogen
  • 11. The Disease Triangle for Gummy Stem Blight Watermelon Didymella Environment
  • 12. Host Range of Important Cucurbit Diseases Winter Summer Squash/ Cuke Melon Watermelon Squash Pumpkin Gourds Downy ** ** * * ** * mildew Phytophthora * -- ** ** ** * Powdery ? * ** ** * * mildew Gummy * ** ** -- * * stem blight Anthracnose ** (*) * -- * **
  • 13. Symptoms of Important Cucurbit Diseases Disease Leaves Crown Vine Fruit Downy mildew √ Powdery mildew √ Phytophthora crown √ √ √ √ and fruit rot Gummy stem blight √ √ (√) √ and black rot Anthracnose √ √ √
  • 14. Spread and Survival of Important Cucurbit Pathogens Spread Rain Survive Disease Organism Wind Splash Water in Soil Downy mildew Water Mold ** (*) -- -- Powdery mildew Fungus ** -- -- -- Phytophthora Water Mold crown and fruit -- * ** ** rot Gummy stem blight and black Fungus * ** -- * rot Anthracnose Fungus (*) ** -- *
  • 15. Diseases that Affect Both Cucurbit and Tomato Crops  Phytophthora  Southern blight crown and fruit rot  Tomato, pepper,  Pepper, tomato, eggplant eggplant  Snap bean  Snap and lima  Jerusalem artichoke beans  Peanut  Root knot  Many broad-leaved crops
  • 16. 5 General Control Strategies Avoidance Protection Resistance Eradication Exclusion
  • 17. Challenges with Spraying for Organic Disease Control (Protection)  Favorable environment  Biopesticides usually less effective than conventional fungicides  Powdery mildew is exception  NOP allows S and Cu only as a last resort  Protectants only  Labels of biopesticides are inaccurate
  • 18. What is AVOIDANCE?  Preventing contact between pathogen and host to prevent disease.  Modifying the environment to make it less favorable for disease.  One of 2 main strategies for organic disease control.  Warning: pathogen is still present!
  • 19. Avoidance Techniques Change planting date Raise beds to prevent damping-off Avoid wetting leaves when watering Mulch to prevent fruit rots
  • 20. Eradication: Length of Crop Rotations Foliar pathogens Soilborne pathogens  No long-term survival  Various survival structures structures  Until infested debris is  Sclerotia gone  Oospores  ≤ 1 yr for bacteria  Dormant mycelia  1-3 yr for fungi and  Cannot eradicate with water molds rotation  Can reduce populations (= primary inoculum)
  • 21. 2 Crop Rotation and Planting Schemes for Small Acreages  For foliar diseases:  For root and wilt  Spread crops in diseases: same botanical  Group crops in family far apart same botanical  Slows pathogen family together spread  Rotate away for 3-4  Disadvantage: Makes years crop rotation difficult  Disadvantage: May increase foliar diseases in wet years
  • 22. Foliar Soilborne pathogens pathogens Separate or Group Related Tomato Solanaceous Squash Arugula Cucurbits Eggplant Crops? & Broccoli Cukes Pepper Brassicas
  • 23. Soil Solarization Sterilizing soil by using heat from the sun trapped under clear plastic by the “greenhouse effect” Solarize Solarizing soil potting is PARTIALLY soil in effective clear plastic bags 2 wk 8 Use 2 weeks layers in plastic June- July
  • 24. Composting to Eliminate Pathogens  Eradication of Nematodes Fungi Seeds pathogens in plant 180 debris 160 D  To be safe: e 140  Peak temperatures g 120 147-158 F. for 21 r 100 days e 80 e  Difficult to achieve s 60 in 1-cu-ft pile 40  Survived: F 20  Fusarium wilt of tomato 0
  • 25. General Cultural Practices to Avoid Disease on All Crops Reduce leaf wetness •Drip irrigation •Increase row/plant spacing •Avoid edges of woods •Row orientation Improve soil drainage • Raised beds • Add organic matter • Compost • Cover crops
  • 26. Controlling Vegetable Diseases- General Organic Techniques  Bacteria  Fungi (true)  Reduce leaf wetness  Copper does not work  One- to two-year  Sulfur is better option rotation  Water molds  Copper (oomycetes)  Root diseases and  Copper nematodes  Potassium phosphite  Improve soil drainage  Not organic certified  Increase organic matter  Resistance
  • 27. General Cultural Practices to Manage Tomato Diseases Grafting •Root knot •Southern blight •Fusarium wilt •Bacterial wilt •(awaytogarden.com) High Tunnels • Prevent fruit cracking • Reduce foliar disease • Extend season • (hightunnel.org, Kansas State)
  • 28. Resistant Tomato Varieties Resistance Available No Resistance  Spotted wilt  Bacterial spot  Early blight  Bacterial wilt  Root knot  Southern blight  Late blight  ‘Mountain Magic’ (campari type)  Resistance in All  ‘Plum Regal’ Hybrids  Gray leaf spot  Fusarium wilt  Except grapes
  • 29. Gray Leaf Spot  ‘Cherokee Purple’ is v. susceptible  2-3 year rotation  Avoid planting tomato and pepper next to each other  Early planting  Disease is favored by high temp and humidity
  • 31. Phytophthora capsici Sporangia— Oospore— • Form on infected plants • Forms in/on fruit • Spread by/in water • Survives in soil
  • 32. Controlling Phytophthora crown and fruit rot— Water management Raised beds • Cut water furrows • Don’t punch holes too deeply Do not use surface water Drip irrigation Avoid planting low areas
  • 33. Controlling Phytophthora crown and fruit rot— Soil management Mulch--Plastic or organic Wash equipment • Between fields • Newly purchased or borrowed Remove cull fruit
  • 35. Controlling Cucurbit Downy Mildew Copper sprays • On crops other than cucumber Avoidance • Early planting date Resistance • C. maxima • Cucumber cultivars • Tolerant • ‘Aladdin’ pumpkin • Some summer squash cv.
  • 37. Controlling Cucurbit Powdery Mildew Biopesticides—spray top and bottom of leaves • Organocide (fish oil + sesame oil) • Potassium bicarbonate • JMS Stylet Oil or horticultural oil Sulfur • Do not apply at 90ºF Resistant summer and winter squash and pumpkin cultivars from Harris Seeds
  • 40. Survival of the GSB Fungus in Cantaloupe Crowns Nov 05 May 06 Nov 06 May 07 Nov 07 100 % Crowns with viable D. bryoniae Soil surface % Crowns with viable D. bryoniae 90 Plastic mulch 100 Soil surface 80 Buried 5 in. 90 Plastic mulch 80 70 70 60 60 50 50 40 40 30 30 20 20 10 10 0 0 0 10 20 30 40 50 60 70 80 90 100 0 10 20 30 40 50 60 70 Weeks after burial Weeks after burial
  • 41. Controlling Gummy Stem Blight and Anthracnose Rotate for 3 years • Summer squash in 2nd or 3rd year Plant early Disease-free transplants Do not reuse plastic mulch Disk fields to bury debris as soon as possible after harvest
  • 42. Managing Fusarium Wilt of Watermelon  Resistant cultivars  Only resist. to race 1  Grafting onto bottlegourd or hybrid squash  Both are susceptible to root knot  Crop rotation to  Hairy vetch as winter reduce build-up of cover crop/green pathogen manure  Works best before soil is infested
  • 43. Managing Bacterial Fruit Blotch  See conventional guidelines  Only exception is avoid use of Actigard
  • 44. Managing Cucurbit Viruses Spread by Aphids  Resistant cultivars  Check if conventional or GM  Horticultural oil sprays  Every other day  Prevent infection  Camouflage  Rye grass between rows  Kaolin clay sprays
  • 45. Sustainable Disease Management Organic soil Cultural management practices Check plants • Cover crops • Exclude, weekly for • Crop rotation • Eliminate and problems • Compost • Avoid disease Identify diseases to Apply select the best biopesticides control method preventatively •Bacterium or fungus? •Water mold or true fungus?