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Scholarly publishing and Linked Data:
                     describing roles, statuses,
                     temporal and contextual extents
                            Silvio Peroni - essepuntato@cs.unibo.it
                                 David Shotton - david.shotton@zoo.ox.ac.uk
                                              Fabio Vitali - fabio@cs.unibo.it




                         I-Semantics 2012, September 5-7, 2012, Graz, Austria
http://creativecommons.org/licenses/by-sa/3.0
Outline




•   Modelling time and context: current ontologies and drawbacks

•   Requirements for a time- and context-aware Linked Data model

•   Our solution: the Time-indexed Value in Context ontology pattern

•   PRO and PSO: two Semantic Publishing ontologies to handle
    personal roles and statuses of documents

•   Conclusions and future directions
Modelling time and context
Semantic Publishing


•   Semantic Publishing characterises the current phase of the
    publishing revolution, which involves Web and Semantic Web
    standards for publishing purposes

•   Semantic Publishing concerns:
    ✦   enriching the article with appropriate metadata
    ✦   enhancing the representation of the meaning of a published document
    ✦   facilitating its automated discovery
    ✦   enabling its linking to semantically related articles
    ✦   providing access to data within the article in actionable form
    ✦   facilitating integration of data between papers
                      ✴      Shotton, D. (2009). Semantic Publishing: the coming revolution in scientific
                                                   journal publishing. Learned Publishing, 22 (2): 85-94.
                                                                                DOI: 10.1087/2009202
Publishing- and scholarly-aware ontologies


•   Important research area: the development of ontologies that
    enable the publication of related semantic data into the Linked
    Data according to appropriate vocabularies and requirements of
    scholarly authoring and publishing

•   We developed the Semantic Publishing and Referencing (SPAR)
    Ontologies, which aim at describing all the aspects of the scholarly
    publishing domain as comprehensive machine-readable RDF
    metadata
    ✦   SPAR homepage: http://purl.org/spar
    ✦   They imports well-known models: DC, PRISM, FRBR, SKOS, CO, FOAF
                     ✴       Peroni, S., Shotton, D. (2012). FaBiO and CiTO: ontologies for describing
                                  bibliographic resources and citations. In Journal of Web Semantics.
                                                                  DOI: 10.1016/j.websem.2012.08.001
Time and context


•   Issue we had to address during the development of SPAR: how to
    handle formally, through ontologies, the contextual and time-
    dependent aspects of publishing entities, in particular:
    ✦   personal roles (author, student, affiliation, etc.)
    ✦   statuses of documents (under-review, accepted for publication, in-
        print, etc.)

•   Basically, we need a mechanism to describe scenario in which an
    entity has a value only within a specific temporal interval and/or
    contextual (e.g. social, cultural, physical) environment

•   Techniques used in existing (Linked Data) ontologies to represent
    the value so as to handle the above modelling scenario:
    subsumptions, property links and inter-linked classes
Subsumptions: values as classes


•   This technique is a simplification usually adopted when one wants to describe a
    value, e.g. being a student, as a sub-specification of a closely-related entity, e.g. a person,
    that holds that value


       Person


    rdfs:subClassOf


       Student


•   Pros: easy modelling; straightforward inference (e.g. if an entity has been a student,
    now or in the past, then it is also a person)
•   Cons: anti-rigid entities cannot be satisfactorily achieved (e.g. when an entity is
    described as student in the model it keeps this characteristic forever)
•   Adopted by: Portal Ontology (http://www.aktors.org/ontology/portal)
Subsumptions: values as classes


•     This technique is a simplification usually adopted when one wants to describe a
      value, e.g. being a student, as a sub-specification of a closely-related entity, e.g. a person,
      that holds that value

    Entity
         Person


      rdfs:subClassOf
    Value
         Student


•     Pros: easy modelling; straightforward inference (e.g. if an entity has been a student,
      now or in the past, then it is also a person)
•     Cons: anti-rigid entities cannot be satisfactorily achieved (e.g. when an entity is
      described as student in the model it keeps this characteristic forever)
•     Adopted by: Portal Ontology (http://www.aktors.org/ontology/portal)
Subsumptions: values as classes


•     This technique is a simplification usually adopted when one wants to describe a
      value, e.g. being a student, as a sub-specification of a closely-related entity, e.g. a person,
      that holds that value

    Entity
                        Being a person is time-independent – Silvio Peroni is a
         Person         living person while Kurt Vonnegut is a dead person,
                        but we still describe both as persons

      rdfs:subClassOf
    Value
         Student


•     Pros: easy modelling; straightforward inference (e.g. if an entity has been a student,
      now or in the past, then it is also a person)
•     Cons: anti-rigid entities cannot be satisfactorily achieved (e.g. when an entity is
      described as student in the model it keeps this characteristic forever)
•     Adopted by: Portal Ontology (http://www.aktors.org/ontology/portal)
Subsumptions: values as classes


•     This technique is a simplification usually adopted when one wants to describe a
      value, e.g. being a student, as a sub-specification of a closely-related entity, e.g. a person,
      that holds that value
                                                                                   OntoClean
    Entity                                                                        classification
                        Being a person is time-independent – Silvio Peroni is a
         Person         living person while Kurt Vonnegut is a dead person,        rigid class
                        but we still describe both as persons

      rdfs:subClassOf
    Value
         Student


•     Pros: easy modelling; straightforward inference (e.g. if an entity has been a student,
      now or in the past, then it is also a person)
•     Cons: anti-rigid entities cannot be satisfactorily achieved (e.g. when an entity is
      described as student in the model it keeps this characteristic forever)
•     Adopted by: Portal Ontology (http://www.aktors.org/ontology/portal)
Subsumptions: values as classes


•     This technique is a simplification usually adopted when one wants to describe a
      value, e.g. being a student, as a sub-specification of a closely-related entity, e.g. a person,
      that holds that value
                                                                                   OntoClean
    Entity                                                                        classification
                        Being a person is time-independent – Silvio Peroni is a
         Person         living person while Kurt Vonnegut is a dead person,        rigid class
                        but we still describe both as persons

      rdfs:subClassOf
    Value
                        Being a student is time-dependent – Silvio Peroni was
         Student
                        recently a graduate student, but it is no longer


•     Pros: easy modelling; straightforward inference (e.g. if an entity has been a student,
      now or in the past, then it is also a person)
•     Cons: anti-rigid entities cannot be satisfactorily achieved (e.g. when an entity is
      described as student in the model it keeps this characteristic forever)
•     Adopted by: Portal Ontology (http://www.aktors.org/ontology/portal)
Subsumptions: values as classes


•     This technique is a simplification usually adopted when one wants to describe a
      value, e.g. being a student, as a sub-specification of a closely-related entity, e.g. a person,
      that holds that value
                                                                                   OntoClean
    Entity                                                                        classification
                        Being a person is time-independent – Silvio Peroni is a
         Person         living person while Kurt Vonnegut is a dead person,         rigid class
                        but we still describe both as persons

      rdfs:subClassOf
    Value
                        Being a student is time-dependent – Silvio Peroni was
         Student
                        recently a graduate student, but it is no longer
                                                                                  anti-rigid class

•     Pros: easy modelling; straightforward inference (e.g. if an entity has been a student,
      now or in the past, then it is also a person)
•     Cons: anti-rigid entities cannot be satisfactorily achieved (e.g. when an entity is
      described as student in the model it keeps this characteristic forever)
•     Adopted by: Portal Ontology (http://www.aktors.org/ontology/portal)
Property links: values as properties

•    This technique takes into account anti-rigid characteristics by using a specific property for
     defining each time- and context-dependent values (e.g. being affiliated with an
     organisation, being the author of a document) that an entity (e.g. a person) have, while
     continuing to express the context to which values refer to as individuals of a particular
     class (e.g. Organization, Document)

     Person     hasAffiliation   Organization


      made


    Document


•    Pros: straightforward specification; very common in Linked Data vocabularies
•    Cons: any time we need an additional value (e.g. being publisher of) we must define a new
     property [bad practice]; it is not possible to understand which is the context (e.g. the
     document) in which a value (e.g. being affiliated with an organisation) is held by an agent
     (e.g. a person) when multiple instances (at different times and/or contexts) are possible
•    Adopted by: SW Conference Ontology (http://data.semanticweb.org/ns/swc/ontology)
Property links: values as properties

  •      This technique takes into account anti-rigid characteristics by using a specific property for
         defining each time- and context-dependent values (e.g. being affiliated with an
         organisation, being the author of a document) that an entity (e.g. a person) have, while
         continuing to express the context to which values refer to as individuals of a particular
         class (e.g. Organization, Document)
Entity                                      Context
                        Value
         Person     hasAffiliation   Organization

  Value
          made


      Document
 Context

  •      Pros: straightforward specification; very common in Linked Data vocabularies
  •      Cons: any time we need an additional value (e.g. being publisher of) we must define a new
         property [bad practice]; it is not possible to understand which is the context (e.g. the
         document) in which a value (e.g. being affiliated with an organisation) is held by an agent
         (e.g. a person) when multiple instances (at different times and/or contexts) are possible
  •      Adopted by: SW Conference Ontology (http://data.semanticweb.org/ns/swc/ontology)
Property links: values as properties

  •      This technique takes into account anti-rigid characteristics by using a specific property for
         defining each time- and context-dependent values (e.g. being affiliated with an
         organisation, being the author of a document) that an entity (e.g. a person) have, while
         continuing to express the context to which values refer to as individuals of a particular
         class (e.g. Organization, Document)
Entity                                      Context
                        Value
         Person     hasAffiliation   Organization
                                                       :person # Affiliation for paper 1
  Value                                                  swrc:affiliation :uni-of-bologna ;
          made                                           foaf:made :paper1 .


      Document
 Context

  •      Pros: straightforward specification; very common in Linked Data vocabularies
  •      Cons: any time we need an additional value (e.g. being publisher of) we must define a new

                                                                                                  }
         property [bad practice]; it is not possible to understand which is the context (e.g. the
         document) in which a value (e.g. being affiliated with an organisation) is held by an agent
         (e.g. a person) when multiple instances (at different times and/or contexts) are possible
  •      Adopted by: SW Conference Ontology (http://data.semanticweb.org/ns/swc/ontology)
Property links: values as properties

  •      This technique takes into account anti-rigid characteristics by using a specific property for
         defining each time- and context-dependent values (e.g. being affiliated with an
         organisation, being the author of a document) that an entity (e.g. a person) have, while
         continuing to express the context to which values refer to as individuals of a particular
         class (e.g. Organization, Document)
Entity                                      Context
                        Value
         Person     hasAffiliation   Organization
                                                       :person # Affiliation for paper 1
  Value                                                  swrc:affiliation :uni-of-bologna ;
          made                                           foaf:made :paper1 .

                                                       :person # Affiliation for paper 2
      Document                                           swrc:affiliation :uni-of-oxford ;
                                                         foaf:made :paper2 .
 Context

  •      Pros: straightforward specification; very common in Linked Data vocabularies
  •      Cons: any time we need an additional value (e.g. being publisher of) we must define a new

                                                                                                  }
         property [bad practice]; it is not possible to understand which is the context (e.g. the
         document) in which a value (e.g. being affiliated with an organisation) is held by an agent
         (e.g. a person) when multiple instances (at different times and/or contexts) are possible
  •      Adopted by: SW Conference Ontology (http://data.semanticweb.org/ns/swc/ontology)
Property links: values as properties

  •      This technique takes into account anti-rigid characteristics by using a specific property for
         defining each time- and context-dependent values (e.g. being affiliated with an
         organisation, being the author of a document) that an entity (e.g. a person) have, while
         continuing to express the context to which values refer to as individuals of a particular
         class (e.g. Organization, Document)
Entity                                      Context
                        Value
         Person     hasAffiliation   Organization
                                                       :person # Affiliation for paper 1
  Value                    Those are the same            swrc:affiliation :uni-of-bologna ;
          made                 resource                  foaf:made :paper1 .

                                                       :person # Affiliation for paper 2
      Document                                           swrc:affiliation :uni-of-oxford ;
                                                         foaf:made :paper2 .
 Context

  •      Pros: straightforward specification; very common in Linked Data vocabularies
  •      Cons: any time we need an additional value (e.g. being publisher of) we must define a new

                                                                                                  }
         property [bad practice]; it is not possible to understand which is the context (e.g. the
         document) in which a value (e.g. being affiliated with an organisation) is held by an agent
         (e.g. a person) when multiple instances (at different times and/or contexts) are possible
  •      Adopted by: SW Conference Ontology (http://data.semanticweb.org/ns/swc/ontology)
Property links: values as properties

  •      This technique takes into account anti-rigid characteristics by using a specific property for
         defining each time- and context-dependent values (e.g. being affiliated with an
         organisation, being the author of a document) that an entity (e.g. a person) have, while
         continuing to express the context to which values refer to as individuals of a particular
         class (e.g. Organization, Document)
Entity                                      Context
                        Value
         Person     hasAffiliation   Organization
                                                       :person # Affiliation for paper 1
  Value                    Those are the same            swrc:affiliation :uni-of-bologna ;
          made                 resource                  foaf:made :paper1 .

                                                       :person # Affiliation for paper 2
      Document         What is the author’s              swrc:affiliation :uni-of-oxford ;
                      affiliation for a specific           foaf:made :paper2 .
 Context                       article?
  •  Pros: straightforward specification; very common in Linked Data vocabularies
  •  Cons: any time we need an additional value (e.g. being publisher of) we must define a new

                                                                                                  }
     property [bad practice]; it is not possible to understand which is the context (e.g. the
     document) in which a value (e.g. being affiliated with an organisation) is held by an agent
     (e.g. a person) when multiple instances (at different times and/or contexts) are possible
  •  Adopted by: SW Conference Ontology (http://data.semanticweb.org/ns/swc/ontology)
Inter-linked classes: values as individuals


•   This technique allows one to address the association of entities (e.g.
    people) to values (e.g. academic roles) considering both as separate class
    and linking them with an additional object property

                                                           graduate-student
    Person        hasRole        Role           rdf:type   professor
         Entity                         Value              intern
                                                           undergraduate-student

•   Pros: easily extensible (adding new values means adding a new individuals)
•   Cons: temporal and contextual information can be associated only to
    individuals of those two classes (e.g. the role graduate-student can be
    associated with a temporal interval in which it holds; however, if two people
    share the same role, there is no way to associate the different intervals during
    which these people hold that role)
•   Adopted by: SW Conference Ontology
Requirements
Requirements of the model


•       The previous techniques are not enough expressive for describing the
        scenario that relates an entity to a particular value in a particular period
        and according to a particular context

•   ✦
        Past works in ontology engineering giving fundamental bases in that area:
         Boella et al. (2007). Roles, an interdisciplinary perspective. Special Issue of the Journal of
         Applied Ontology, 2 (2): 81-207. ISSN: 1570-5838
    ✦    Guarino et al. (2002). Evaluating ontological decisions with OntoClean. In
         Communications of the ACM, 45 (2): 61-65. DOI: 10.1145/503124.503150
    ✦    Masolo et al. (2004). Social Roles and their Descriptions. In Proceedings of KR 2004

•   ✦
        Requirements for a (Linked Data) model:
         expressible, to handle the above scenario entirely
    ✦    compact, easy to write and understand
    ✦    flexible, to allow the definition of new values without compromising the consistency of
         the model, even according to multiple triplestores made available by different agent
Towards a solution: time-indexed situation

•       The time-indexed situation
        http://www.ontologydesignpatterns.org/cp/owl/timeindexedsituation.owl
        is an ontological pattern that allows one to link a subject to a time-dependent
        description of a situation
    ✦     In this context, a situation is defined as a view on a set of entities (e.g. a relational context)

•       It is able to handle our scenario, but it is still too abstract both as a model
        and in terms of its terminology
Towards a solution: time-indexed situation

  •       The time-indexed situation
          http://www.ontologydesignpatterns.org/cp/owl/timeindexedsituation.owl
          is an ontological pattern that allows one to link a subject to a time-dependent
          description of a situation
      ✦     In this context, a situation is defined as a view on a set of entities (e.g. a relational context)

  •       It is able to handle our scenario, but it is still too abstract both as a model
          and in terms of its terminology
:peroni a foaf:Person ; foaf:name “Silvio Peroni” .
:uni-of-oxford a foaf:Organization ;
  foaf:name “University of Oxford” .
:intern a swc:Role .
Towards a solution: time-indexed situation

  •       The time-indexed situation
          http://www.ontologydesignpatterns.org/cp/owl/timeindexedsituation.owl
          is an ontological pattern that allows one to link a subject to a time-dependent
          description of a situation
      ✦     In this context, a situation is defined as a view on a set of entities (e.g. a relational context)

  •       It is able to handle our scenario, but it is still too abstract both as a model
          and in terms of its terminology
:peroni a foaf:Person ; foaf:name “Silvio Peroni” .
:uni-of-oxford a foaf:Organization ;
  foaf:name “University of Oxford” .
:intern a swc:Role .


:peroni tisit:hasTimeIndexedSetting [
  a tisit:TimeIndexedSituation ;
  tisit:forEntity :intern,:uni-of-oxford ;
  tisit:atTime [
     a ti:TimeInterval ;
     ti:hasIntervalStartDate “2012-06” ;
     ti:hasIntervalEndDate “2012-12” ] ] .
Towards a solution: time-indexed situation

  •          The time-indexed situation
             http://www.ontologydesignpatterns.org/cp/owl/timeindexedsituation.owl
             is an ontological pattern that allows one to link a subject to a time-dependent
             description of a situation
         ✦     In this context, a situation is defined as a view on a set of entities (e.g. a relational context)

  •          It is able to handle our scenario, but it is still too abstract both as a model
             and in terms of its terminology
:peroni a foaf:Person ; foaf:name “Silvio Peroni” .
:uni-of-oxford a foaf:Organization ;
  foaf:name “University of Oxford” .
:intern a swc:Role .

Entity
:peroni tisit:hasTimeIndexedSetting [
  a tisit:TimeIndexedSituation ;
  tisit:forEntity :intern,:uni-of-oxford ;
  tisit:atTime [    Value    Context
     a ti:TimeInterval ;
  Time




     ti:hasIntervalStartDate “2012-06” ;
     ti:hasIntervalEndDate “2012-12” ] ] .
Towards a solution: time-indexed situation

  •          The time-indexed situation
             http://www.ontologydesignpatterns.org/cp/owl/timeindexedsituation.owl
             is an ontological pattern that allows one to link a subject to a time-dependent
             description of a situation
         ✦     In this context, a situation is defined as a view on a set of entities (e.g. a relational context)

  •          It is able to handle our scenario, but it is still too abstract both as a model
             and in terms of its terminology
:peroni a foaf:Person ; foaf:name “Silvio Peroni” .
:uni-of-oxford a foaf:Organization ;
  foaf:name “University of Oxford” .
:intern a swc:Role .
                                                               Different interpretations:
Entity
:peroni tisit:hasTimeIndexedSetting [                          1. :peroni related at a particular period to :uni-of-
  a tisit:TimeIndexedSituation ;                                  oxford that has role :intern
  tisit:forEntity :intern,:uni-of-oxford ;                     2. :peroni worked at a particular period with
  tisit:atTime [    Value    Context                              somebody having the role of :intern within :uni-of-
     a ti:TimeInterval ;                                          oxford
  Time




     ti:hasIntervalStartDate “2012-06” ;                       3. :peroni was an :intern within :uni-of-oxford during
     ti:hasIntervalEndDate “2012-12” ] ] .
                                                                  a particular period
Towards a solution: time-indexed situation

  •          The time-indexed situation
             http://www.ontologydesignpatterns.org/cp/owl/timeindexedsituation.owl
             is an ontological pattern that allows one to link a subject to a time-dependent
             description of a situation
         ✦     In this context, a situation is defined as a view on a set of entities (e.g. a relational context)

  •          It is able to handle our scenario, but it is still too abstract both as a model
             and in terms of its terminology
:peroni a foaf:Person ; foaf:name “Silvio Peroni” .
:uni-of-oxford a foaf:Organization ;
  foaf:name “University of Oxford” .
:intern a swc:Role .
                                                               Different interpretations:
Entity
:peroni tisit:hasTimeIndexedSetting [                          1. :peroni related at a particular period to :uni-of-
  a tisit:TimeIndexedSituation ;                                  oxford that has role :intern
  tisit:forEntity :intern,:uni-of-oxford ;                     2. :peroni worked at a particular period with
  tisit:atTime [    Value    Context                              somebody having the role of :intern within :uni-of-
     a ti:TimeInterval ;                                          oxford
  Time




     ti:hasIntervalStartDate “2012-06” ;                       3. :peroni was an :intern within :uni-of-oxford during
     ti:hasIntervalEndDate “2012-12” ] ] .
                                                                  a particular period
Towards a solution: time-indexed situation

  •          The time-indexed situation
             http://www.ontologydesignpatterns.org/cp/owl/timeindexedsituation.owl
             is an ontological pattern that allows one to link a subject to a time-dependent
             description of a situation
         ✦     In this context, a situation is defined as a view on a set of entities (e.g. a relational context)

  •          It is able to handle our scenario, but it is still too abstract both as a model
             and in terms of its terminology
:peroni a foaf:Person ; foaf:name “Silvio Peroni” .
:uni-of-oxford a foaf:Organization ;
  foaf:name “University of Oxford” .
:intern a swc:Role .
                                                               Different interpretations:
Entity
:peroni tisit:hasTimeIndexedSetting [                          1. :peroni related at a particular period to :uni-of-
  a tisit:TimeIndexedSituation ;                                  oxford that has role :intern
  tisit:forEntity :intern,:uni-of-oxford ;                     2. :peroni worked at a particular period with
  tisit:atTime [    Value    Context                              somebody having the role of :intern within :uni-of-
     a ti:TimeInterval ;                                          oxford
  Time




     ti:hasIntervalStartDate “2012-06” ;                       3. :peroni was an :intern within :uni-of-oxford during
     ti:hasIntervalEndDate “2012-12” ] ] .
                                                                  a particular period
Towards a solution: time-indexed situation

  •          The time-indexed situation
             http://www.ontologydesignpatterns.org/cp/owl/timeindexedsituation.owl
             is an ontological pattern that allows one to link a subject to a time-dependent
             description of a situation
         ✦     In this context, a situation is defined as a view on a set of entities (e.g. a relational context)

  •          It is able to handle our scenario, but it is still too abstract both as a model
             and in terms of its terminology
:peroni a foaf:Person ; foaf:name “Silvio Peroni” .
:uni-of-oxford a foaf:Organization ;
  foaf:name “University of Oxford” .
:intern a swc:Role .
                                                               Different interpretations:
Entity
:peroni tisit:hasTimeIndexedSetting [                          1. :peroni related at a particular period to :uni-of-
  a tisit:TimeIndexedSituation ;                                  oxford that has role :intern
  tisit:forEntity :intern,:uni-of-oxford ;                     2. :peroni worked at a particular period with
  tisit:atTime [    Value    Context                              somebody having the role of :intern within :uni-of-
     a ti:TimeInterval ;                                          oxford
  Time




     ti:hasIntervalStartDate “2012-06” ;                       3. :peroni was an :intern within :uni-of-oxford during
     ti:hasIntervalEndDate “2012-12” ] ] .
                                                                  a particular period that’s fine, but how
                                                                                         to understand that?
Our solution
Time-indexed value in context

•       Our time-indexed value in context (TVC)
        http://www.essepuntato.it/2012/04/tvc
        extends the time-indexed
        situation pattern so as
        to fully describe the four
        different entities involved
        in these kinds of scenarios:
    ✦     the entity having some value
    ✦     the value had by someone
    ✦     the time period during which the entity has that value
    ✦     the particular context that characterises the act of
          having that value
Time-indexed value in context

•       Our time-indexed value in context (TVC)
        http://www.essepuntato.it/2012/04/tvc
        extends the time-indexed
        situation pattern so as
        to fully describe the four
        different entities involved
        in these kinds of scenarios:
    ✦     the entity having some value
    ✦     the value had by someone
    ✦     the time period during which the entity has that value   this class is a particular kind of time-
    ✦     the particular context that characterises the act of      indexed situation (i.e. a subclass of
          having that value                                           tisit:TimeIndexedSituation) that
                                                                    represents an hub linking the entity
                                                                    having a particular value (hasValue),
                                                                     the value itself (withValue) and the
                                                                     temporal (atTime) and contextual
                                                                   (withinContext) extents on which the
                                                                     entity-value relationship depends
Time-indexed value in context

•       Our time-indexed value in context (TVC)
        http://www.essepuntato.it/2012/04/tvc
        extends the time-indexed
        situation pattern so as
        to fully describe the four
        different entities involved
        in these kinds of scenarios:
    ✦     the entity having some value
    ✦     the value had by someone
    ✦     the time period during which the entity has that value   this class is a particular kind of time-
    ✦     the particular context that characterises the act of      indexed situation (i.e. a subclass of
          having that value                                           tisit:TimeIndexedSituation) that
         :peroni tvc:hasValue [                                     represents an hub linking the entity
           a tvc:ValueInTime ;                                      having a particular value (hasValue),
           tvc:withValue :intern ;                                   the value itself (withValue) and the
           tvc:withinContext :uni-of-oxford ;                        temporal (atTime) and contextual
           tvc:atTime [
                                                                   (withinContext) extents on which the
              a ti:TimeInterval ;
              ti:hasIntervalStartDate “2012-06” ;                    entity-value relationship depends
              ti:hasIntervalEndDate “2012-12” ] ] .
Time-indexed value in context

 •       Our time-indexed value in context (TVC)
         http://www.essepuntato.it/2012/04/tvc
         extends the time-indexed
         situation pattern so as
         to fully describe the four
         different entities involved
         in these kinds of scenarios:
     ✦     the entity having some value
     ✦     the value had by someone
     ✦     the time period during which the entity has that value   this class is a particular kind of time-
     ✦     the particular context that characterises the act of      indexed situation (i.e. a subclass of
           having that value                                           tisit:TimeIndexedSituation) that
Entity :peroni tvc:hasValue [                                        represents an hub linking the entity
             a tvc:ValueInTime ;                                     having a particular value (hasValue),
             tvc:withValue :intern ; Value                            the value itself (withValue) and the
             tvc:withinContext :uni-of-oxford ; Context               temporal (atTime) and contextual
             tvc:atTime [
                                                                    (withinContext) extents on which the
               a ti:TimeInterval ;
            Time




               ti:hasIntervalStartDate “2012-06” ;                    entity-value relationship depends
               ti:hasIntervalEndDate “2012-12” ] ] .
Querying a TVC-based model via SPARQL
Querying a TVC-based model via SPARQL


•    Give me all the values had by :peroni
     SELECT DISTINCT ?value WHERE {
       :peroni tvc:hasValue/tvc:withValue ?value }
Querying a TVC-based model via SPARQL


•    Give me all the values had by :peroni
     SELECT DISTINCT ?value WHERE {
       :peroni tvc:hasValue/tvc:withValue ?value }

•    Give me all the roles had by :peroni at 24 August 2010 (i.e. aquired
     before and lost after that date) in the context of :uni-of-bologna
     SELECT DISTINCT ?value WHERE {
       ?value a swc:Role .
       :peroni tvc:hasValue [ a tvc:ValueInTime ;
         tvc:withValue ?value ;
         tvc:withinContext :uni-of-bologna ;
         tvc:atTime [ a ti:TimeInterval ;
           ti:hasIntervalStartDate ?start ;
           ti:hasIntervalEndDate ?end ] ]
       FILTER(
         xsd:dateTime(?start) <= “2010-08-24T00:00:00Z” &&
         xsd:dateTime(?end) > “2010-08-25T00:00:00Z” ) }
Reusing external classes as values
Reusing external classes as values

•   The Portal Ontology defines a hierarchy of roles in form of classes, which
    can be used with TVC
    :person1 tvc:hasValue [ a tvc:ValueInTime ;
      tvc:withValue portal:Affiliated-Person ] .
    :person2 tvc:hasValue [ a tvc:ValueInTime ;
      tvc:withValue portal:Student ] .
    :person3 tvc:hasValue [ a tvc:ValueInTime ;
      tvc:withValue portal:PhD-Student ] .             Statements defined in the
                                                       Portal Ontology
    portal:Student rdfs:subClassOf portal:Affiliated-Person .
    portal:PhD-Student rdfs:subClassOf portal:Student .
Reusing external classes as values

•   The Portal Ontology defines a hierarchy of roles in form of classes, which
    can be used with TVC
    :person1 tvc:hasValue [ a tvc:ValueInTime ;
      tvc:withValue portal:Affiliated-Person ] .
    :person2 tvc:hasValue [ a tvc:ValueInTime ;
      tvc:withValue portal:Student ] .
    :person3 tvc:hasValue [ a tvc:ValueInTime ;
      tvc:withValue portal:PhD-Student ] .             Statements defined in the
                                                       Portal Ontology
    portal:Student rdfs:subClassOf portal:Affiliated-Person .
    portal:PhD-Student rdfs:subClassOf portal:Student .

•   Give me of any person affiliated with :uni-of-bologna
    SELECT DISTINCT ?person WHERE {
      ?person tvc:hasValue [ a tvc:ValueInTime ; tvc:withValue ?aff ;
        tvc:withinContext :uni-of-bologna ] .
      { SELECT ?aff WHERE {
        { ?aff a owl:Class . FILTER(?aff = portal:Affiliated-Person) }
        UNION
        { ?aff rdfs:subClassOf+ portal:Affiliated-Person } } } }
Constructing second-order inferences
Constructing second-order inferences

•   It is sometimes desirable to reuse ontologies that specify categories (e.g.
    roles) through properties rather than classes
Constructing second-order inferences

•       It is sometimes desirable to reuse ontologies that specify categories (e.g.
        roles) through properties rather than classes
    ✦    E.g. BIBO, available at http://http://bibliontology.com
         dcterms:contributor a owl:ObjectProperty .
         bibo:translator rdfs:subPropertyOf dcterms:contributor .
         bibo:editor rdfs:subPropertyOf dcterms:contributor .
         bibo:director rdfs:subPropertyOf dcterms:contributor .
Constructing second-order inferences

•       It is sometimes desirable to reuse ontologies that specify categories (e.g.
        roles) through properties rather than classes
    ✦     E.g. BIBO, available at http://http://bibliontology.com
          dcterms:contributor a owl:ObjectProperty .
          bibo:translator rdfs:subPropertyOf dcterms:contributor .
          bibo:editor rdfs:subPropertyOf dcterms:contributor .
          bibo:director rdfs:subPropertyOf dcterms:contributor .


•       These properties can be used as objects of tvc:withValue statements (by
        means of OWL 2 punning)
        _:person a foaf:Person ; tvc:hasValue [
          tvc:withValue bibo:translator ; tvc:withinContext _:document ; ... ] .
Constructing second-order inferences

•       It is sometimes desirable to reuse ontologies that specify categories (e.g.
        roles) through properties rather than classes
    ✦     E.g. BIBO, available at http://http://bibliontology.com
          dcterms:contributor a owl:ObjectProperty .
          bibo:translator rdfs:subPropertyOf dcterms:contributor .
          bibo:editor rdfs:subPropertyOf dcterms:contributor .
          bibo:director rdfs:subPropertyOf dcterms:contributor .


•       These properties can be used as objects of tvc:withValue statements (by
        means of OWL 2 punning)
        _:person a foaf:Person ; tvc:hasValue [
          tvc:withValue bibo:translator ; tvc:withinContext _:document ; ... ] .


•       Moreover, it is possible to construct second-order inferences starting
        from TVC descriptions
        CONSTRUCT { ?doc ?property ?person }
        WHERE { ?doc a foaf:Document . ?person a foaf:Person ; tvc:hasValue [
          tvc:withValue ?property ; tvc:withinContext ?doc ]
          { SELECT ?property WHERE {
            { ?property a owl:ObjectProperty . FILTER(?property = dcterms:contributor) } UNION
            { ?property rdfs:subPropertyOf+ dcterms:contributor } } }
Applying TVC to
the Semantic Publishing domain
PRO and PSO: ontologies for
        agent’s roles and document statuses




              Entity


Value                  Context




              Time
PRO and PSO: ontologies for
         agent’s roles and document statuses
Entity




                           Context
Value




                    Time
PRO and PSO: ontologies for
         agent’s roles and document statuses
Entity




                                             Entity


                                     Value            Context
                           Context
Value




                                             Time
                    Time
PRO and PSO: ontologies for
         agent’s roles and document statuses
Entity




                                                             Context
                                             Entity



                           Context
Value




                                     Value
                    Time




                                                      Time
Examples
:person pro:holdsRoleInTime
Examples
:person pro:holdsRoleInTime
  [ a pro:RoleInTime ; as author   of two different papers
     pro:withRole pro:author ;
     pro:relatesToDocument
       :paper1 , :paper2 ] ,
Examples
:person pro:holdsRoleInTime
  [ a pro:RoleInTime ; as author of two different papers
     pro:withRole pro:author ;
     pro:relatesToDocument
       :paper1 , :paper2 ] ,
  [ a pro:RoleInTime ; as affiliate of the University of Bologna   for the first paper
     pro:withRole pro:affiliate ;
     pro:relatesToDocument :paper1 ;
     pro:relatesToOrganization :uni-of-bologna ] ,
Examples
:person pro:holdsRoleInTime
  [ a pro:RoleInTime ; as author of two different papers
     pro:withRole pro:author ;
     pro:relatesToDocument
       :paper1 , :paper2 ] ,
  [ a pro:RoleInTime ; as affiliate of the University of Bologna for the first paper
     pro:withRole pro:affiliate ;
     pro:relatesToDocument :paper1 ;
     pro:relatesToOrganization :uni-of-bologna ] ,
  [ a pro:RoleInTime ; as affiliate of the University of Oxford for the second paper
     pro:withRole pro:affiliate ;
     pro:relatesToDocument :paper2 ;
     pro:relatesToOrganization :uni-of-oxford ] .
Examples
:person pro:holdsRoleInTime
  [ a pro:RoleInTime ; as author of two different papers
     pro:withRole pro:author ;
     pro:relatesToDocument
       :paper1 , :paper2 ] ,
  [ a pro:RoleInTime ; as affiliate of the University of Bologna for the first paper
     pro:withRole pro:affiliate ;
     pro:relatesToDocument :paper1 ;
     pro:relatesToOrganization :uni-of-bologna ] ,
  [ a pro:RoleInTime ; as affiliate of the University of Oxford for the second paper
     pro:withRole pro:affiliate ;
     pro:relatesToDocument :paper2 ;
     pro:relatesToOrganization :uni-of-oxford ] .

:paper1 pso:holdsStatusInTime
Examples
:person pro:holdsRoleInTime
  [ a pro:RoleInTime ; as author of two different papers
     pro:withRole pro:author ;
     pro:relatesToDocument
       :paper1 , :paper2 ] ,
  [ a pro:RoleInTime ; as affiliate of the University of Bologna for the first paper
     pro:withRole pro:affiliate ;
     pro:relatesToDocument :paper1 ;
     pro:relatesToOrganization :uni-of-bologna ] ,
  [ a pro:RoleInTime ; as affiliate of the University of Oxford for the second paper
     pro:withRole pro:affiliate ;
     pro:relatesToDocument :paper2 ;
     pro:relatesToOrganization :uni-of-oxford ] .

:paper1 pso:holdsStatusInTime
  [ a pso:StatusInTime ; paper submitted for publication
     pso:withStatus pso:submitted ;
     tvc:atTime [ ti:hasIntervalStartDate “2009-04-24T13:18:21Z”^^xsd:dateTime ] ;
     pso:isAquiredAsConsequenceOf :author-submission-event ] ,
Examples
:person pro:holdsRoleInTime
  [ a pro:RoleInTime ; as author of two different papers
     pro:withRole pro:author ;
     pro:relatesToDocument
       :paper1 , :paper2 ] ,
  [ a pro:RoleInTime ; as affiliate of the University of Bologna for the first paper
     pro:withRole pro:affiliate ;
     pro:relatesToDocument :paper1 ;
     pro:relatesToOrganization :uni-of-bologna ] ,
  [ a pro:RoleInTime ; as affiliate of the University of Oxford for the second paper
     pro:withRole pro:affiliate ;
     pro:relatesToDocument :paper2 ;
     pro:relatesToOrganization :uni-of-oxford ] .

:paper1 pso:holdsStatusInTime
  [ a pso:StatusInTime ; paper submitted for publication
     pso:withStatus pso:submitted ;
     tvc:atTime [ ti:hasIntervalStartDate “2009-04-24T13:18:21Z”^^xsd:dateTime ] ;
     pso:isAquiredAsConsequenceOf :author-submission-event ] ,
  [ a pso:StatusInTime ; paper is under review
     pso:withStatus pso:under-review ;
     tvc:atTime [ ti:hasIntervalStartDate “2009-04-26T12:00:00Z”^^xsd:dateTime ;
                  ti:hasIntervalEndDate “2009-05-27T17:38:01Z”^^xsd:dateTime ] ;
     pso:isAquiredAsConsequenceOf :editors-send-paper-to-reviewers-event ] ;
     pso:isLostAsConsequenceOf :reviewers-complete-the-reviews-event ] .
Conclusions and future directions


•       Time and context change the way of modelling domains through OWL
    ✦     humans acting in specific roles
    ✦     things processed in phases

•       Linked data models should be improved when needed by using time- and context-
        based specifications for roles and statuses

•       In the domain of scholarly publishing, we proposed the Publishing Roles Ontology (PRO)
        and the Publishing Status Ontology (PSO) – both part of SPAR – and we illustrated how
        they provide lightweight and easy integration of time- and context-related features

•       They implement the Time-indexed Value in Context (TVC), i.e. the ontological pattern we
        proposed to deal with temporal and contextual issues

•     Future directions:
    ✦   to study integration paths between other well-known ontologies through TVC
    ✦   development of APIs so as to use the pattern within Java and Python applications
Thanks for your attention

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Scholarly publishing and Linked Data: describing roles, statuses, temporal and contextual extents

  • 1. Scholarly publishing and Linked Data: describing roles, statuses, temporal and contextual extents Silvio Peroni - essepuntato@cs.unibo.it David Shotton - david.shotton@zoo.ox.ac.uk Fabio Vitali - fabio@cs.unibo.it I-Semantics 2012, September 5-7, 2012, Graz, Austria http://creativecommons.org/licenses/by-sa/3.0
  • 2. Outline • Modelling time and context: current ontologies and drawbacks • Requirements for a time- and context-aware Linked Data model • Our solution: the Time-indexed Value in Context ontology pattern • PRO and PSO: two Semantic Publishing ontologies to handle personal roles and statuses of documents • Conclusions and future directions
  • 4. Semantic Publishing • Semantic Publishing characterises the current phase of the publishing revolution, which involves Web and Semantic Web standards for publishing purposes • Semantic Publishing concerns: ✦ enriching the article with appropriate metadata ✦ enhancing the representation of the meaning of a published document ✦ facilitating its automated discovery ✦ enabling its linking to semantically related articles ✦ providing access to data within the article in actionable form ✦ facilitating integration of data between papers ✴ Shotton, D. (2009). Semantic Publishing: the coming revolution in scientific journal publishing. Learned Publishing, 22 (2): 85-94. DOI: 10.1087/2009202
  • 5. Publishing- and scholarly-aware ontologies • Important research area: the development of ontologies that enable the publication of related semantic data into the Linked Data according to appropriate vocabularies and requirements of scholarly authoring and publishing • We developed the Semantic Publishing and Referencing (SPAR) Ontologies, which aim at describing all the aspects of the scholarly publishing domain as comprehensive machine-readable RDF metadata ✦ SPAR homepage: http://purl.org/spar ✦ They imports well-known models: DC, PRISM, FRBR, SKOS, CO, FOAF ✴ Peroni, S., Shotton, D. (2012). FaBiO and CiTO: ontologies for describing bibliographic resources and citations. In Journal of Web Semantics. DOI: 10.1016/j.websem.2012.08.001
  • 6. Time and context • Issue we had to address during the development of SPAR: how to handle formally, through ontologies, the contextual and time- dependent aspects of publishing entities, in particular: ✦ personal roles (author, student, affiliation, etc.) ✦ statuses of documents (under-review, accepted for publication, in- print, etc.) • Basically, we need a mechanism to describe scenario in which an entity has a value only within a specific temporal interval and/or contextual (e.g. social, cultural, physical) environment • Techniques used in existing (Linked Data) ontologies to represent the value so as to handle the above modelling scenario: subsumptions, property links and inter-linked classes
  • 7. Subsumptions: values as classes • This technique is a simplification usually adopted when one wants to describe a value, e.g. being a student, as a sub-specification of a closely-related entity, e.g. a person, that holds that value Person rdfs:subClassOf Student • Pros: easy modelling; straightforward inference (e.g. if an entity has been a student, now or in the past, then it is also a person) • Cons: anti-rigid entities cannot be satisfactorily achieved (e.g. when an entity is described as student in the model it keeps this characteristic forever) • Adopted by: Portal Ontology (http://www.aktors.org/ontology/portal)
  • 8. Subsumptions: values as classes • This technique is a simplification usually adopted when one wants to describe a value, e.g. being a student, as a sub-specification of a closely-related entity, e.g. a person, that holds that value Entity Person rdfs:subClassOf Value Student • Pros: easy modelling; straightforward inference (e.g. if an entity has been a student, now or in the past, then it is also a person) • Cons: anti-rigid entities cannot be satisfactorily achieved (e.g. when an entity is described as student in the model it keeps this characteristic forever) • Adopted by: Portal Ontology (http://www.aktors.org/ontology/portal)
  • 9. Subsumptions: values as classes • This technique is a simplification usually adopted when one wants to describe a value, e.g. being a student, as a sub-specification of a closely-related entity, e.g. a person, that holds that value Entity Being a person is time-independent – Silvio Peroni is a Person living person while Kurt Vonnegut is a dead person, but we still describe both as persons rdfs:subClassOf Value Student • Pros: easy modelling; straightforward inference (e.g. if an entity has been a student, now or in the past, then it is also a person) • Cons: anti-rigid entities cannot be satisfactorily achieved (e.g. when an entity is described as student in the model it keeps this characteristic forever) • Adopted by: Portal Ontology (http://www.aktors.org/ontology/portal)
  • 10. Subsumptions: values as classes • This technique is a simplification usually adopted when one wants to describe a value, e.g. being a student, as a sub-specification of a closely-related entity, e.g. a person, that holds that value OntoClean Entity classification Being a person is time-independent – Silvio Peroni is a Person living person while Kurt Vonnegut is a dead person, rigid class but we still describe both as persons rdfs:subClassOf Value Student • Pros: easy modelling; straightforward inference (e.g. if an entity has been a student, now or in the past, then it is also a person) • Cons: anti-rigid entities cannot be satisfactorily achieved (e.g. when an entity is described as student in the model it keeps this characteristic forever) • Adopted by: Portal Ontology (http://www.aktors.org/ontology/portal)
  • 11. Subsumptions: values as classes • This technique is a simplification usually adopted when one wants to describe a value, e.g. being a student, as a sub-specification of a closely-related entity, e.g. a person, that holds that value OntoClean Entity classification Being a person is time-independent – Silvio Peroni is a Person living person while Kurt Vonnegut is a dead person, rigid class but we still describe both as persons rdfs:subClassOf Value Being a student is time-dependent – Silvio Peroni was Student recently a graduate student, but it is no longer • Pros: easy modelling; straightforward inference (e.g. if an entity has been a student, now or in the past, then it is also a person) • Cons: anti-rigid entities cannot be satisfactorily achieved (e.g. when an entity is described as student in the model it keeps this characteristic forever) • Adopted by: Portal Ontology (http://www.aktors.org/ontology/portal)
  • 12. Subsumptions: values as classes • This technique is a simplification usually adopted when one wants to describe a value, e.g. being a student, as a sub-specification of a closely-related entity, e.g. a person, that holds that value OntoClean Entity classification Being a person is time-independent – Silvio Peroni is a Person living person while Kurt Vonnegut is a dead person, rigid class but we still describe both as persons rdfs:subClassOf Value Being a student is time-dependent – Silvio Peroni was Student recently a graduate student, but it is no longer anti-rigid class • Pros: easy modelling; straightforward inference (e.g. if an entity has been a student, now or in the past, then it is also a person) • Cons: anti-rigid entities cannot be satisfactorily achieved (e.g. when an entity is described as student in the model it keeps this characteristic forever) • Adopted by: Portal Ontology (http://www.aktors.org/ontology/portal)
  • 13. Property links: values as properties • This technique takes into account anti-rigid characteristics by using a specific property for defining each time- and context-dependent values (e.g. being affiliated with an organisation, being the author of a document) that an entity (e.g. a person) have, while continuing to express the context to which values refer to as individuals of a particular class (e.g. Organization, Document) Person hasAffiliation Organization made Document • Pros: straightforward specification; very common in Linked Data vocabularies • Cons: any time we need an additional value (e.g. being publisher of) we must define a new property [bad practice]; it is not possible to understand which is the context (e.g. the document) in which a value (e.g. being affiliated with an organisation) is held by an agent (e.g. a person) when multiple instances (at different times and/or contexts) are possible • Adopted by: SW Conference Ontology (http://data.semanticweb.org/ns/swc/ontology)
  • 14. Property links: values as properties • This technique takes into account anti-rigid characteristics by using a specific property for defining each time- and context-dependent values (e.g. being affiliated with an organisation, being the author of a document) that an entity (e.g. a person) have, while continuing to express the context to which values refer to as individuals of a particular class (e.g. Organization, Document) Entity Context Value Person hasAffiliation Organization Value made Document Context • Pros: straightforward specification; very common in Linked Data vocabularies • Cons: any time we need an additional value (e.g. being publisher of) we must define a new property [bad practice]; it is not possible to understand which is the context (e.g. the document) in which a value (e.g. being affiliated with an organisation) is held by an agent (e.g. a person) when multiple instances (at different times and/or contexts) are possible • Adopted by: SW Conference Ontology (http://data.semanticweb.org/ns/swc/ontology)
  • 15. Property links: values as properties • This technique takes into account anti-rigid characteristics by using a specific property for defining each time- and context-dependent values (e.g. being affiliated with an organisation, being the author of a document) that an entity (e.g. a person) have, while continuing to express the context to which values refer to as individuals of a particular class (e.g. Organization, Document) Entity Context Value Person hasAffiliation Organization :person # Affiliation for paper 1 Value swrc:affiliation :uni-of-bologna ; made foaf:made :paper1 . Document Context • Pros: straightforward specification; very common in Linked Data vocabularies • Cons: any time we need an additional value (e.g. being publisher of) we must define a new } property [bad practice]; it is not possible to understand which is the context (e.g. the document) in which a value (e.g. being affiliated with an organisation) is held by an agent (e.g. a person) when multiple instances (at different times and/or contexts) are possible • Adopted by: SW Conference Ontology (http://data.semanticweb.org/ns/swc/ontology)
  • 16. Property links: values as properties • This technique takes into account anti-rigid characteristics by using a specific property for defining each time- and context-dependent values (e.g. being affiliated with an organisation, being the author of a document) that an entity (e.g. a person) have, while continuing to express the context to which values refer to as individuals of a particular class (e.g. Organization, Document) Entity Context Value Person hasAffiliation Organization :person # Affiliation for paper 1 Value swrc:affiliation :uni-of-bologna ; made foaf:made :paper1 . :person # Affiliation for paper 2 Document swrc:affiliation :uni-of-oxford ; foaf:made :paper2 . Context • Pros: straightforward specification; very common in Linked Data vocabularies • Cons: any time we need an additional value (e.g. being publisher of) we must define a new } property [bad practice]; it is not possible to understand which is the context (e.g. the document) in which a value (e.g. being affiliated with an organisation) is held by an agent (e.g. a person) when multiple instances (at different times and/or contexts) are possible • Adopted by: SW Conference Ontology (http://data.semanticweb.org/ns/swc/ontology)
  • 17. Property links: values as properties • This technique takes into account anti-rigid characteristics by using a specific property for defining each time- and context-dependent values (e.g. being affiliated with an organisation, being the author of a document) that an entity (e.g. a person) have, while continuing to express the context to which values refer to as individuals of a particular class (e.g. Organization, Document) Entity Context Value Person hasAffiliation Organization :person # Affiliation for paper 1 Value Those are the same swrc:affiliation :uni-of-bologna ; made resource foaf:made :paper1 . :person # Affiliation for paper 2 Document swrc:affiliation :uni-of-oxford ; foaf:made :paper2 . Context • Pros: straightforward specification; very common in Linked Data vocabularies • Cons: any time we need an additional value (e.g. being publisher of) we must define a new } property [bad practice]; it is not possible to understand which is the context (e.g. the document) in which a value (e.g. being affiliated with an organisation) is held by an agent (e.g. a person) when multiple instances (at different times and/or contexts) are possible • Adopted by: SW Conference Ontology (http://data.semanticweb.org/ns/swc/ontology)
  • 18. Property links: values as properties • This technique takes into account anti-rigid characteristics by using a specific property for defining each time- and context-dependent values (e.g. being affiliated with an organisation, being the author of a document) that an entity (e.g. a person) have, while continuing to express the context to which values refer to as individuals of a particular class (e.g. Organization, Document) Entity Context Value Person hasAffiliation Organization :person # Affiliation for paper 1 Value Those are the same swrc:affiliation :uni-of-bologna ; made resource foaf:made :paper1 . :person # Affiliation for paper 2 Document What is the author’s swrc:affiliation :uni-of-oxford ; affiliation for a specific foaf:made :paper2 . Context article? • Pros: straightforward specification; very common in Linked Data vocabularies • Cons: any time we need an additional value (e.g. being publisher of) we must define a new } property [bad practice]; it is not possible to understand which is the context (e.g. the document) in which a value (e.g. being affiliated with an organisation) is held by an agent (e.g. a person) when multiple instances (at different times and/or contexts) are possible • Adopted by: SW Conference Ontology (http://data.semanticweb.org/ns/swc/ontology)
  • 19. Inter-linked classes: values as individuals • This technique allows one to address the association of entities (e.g. people) to values (e.g. academic roles) considering both as separate class and linking them with an additional object property graduate-student Person hasRole Role rdf:type professor Entity Value intern undergraduate-student • Pros: easily extensible (adding new values means adding a new individuals) • Cons: temporal and contextual information can be associated only to individuals of those two classes (e.g. the role graduate-student can be associated with a temporal interval in which it holds; however, if two people share the same role, there is no way to associate the different intervals during which these people hold that role) • Adopted by: SW Conference Ontology
  • 21. Requirements of the model • The previous techniques are not enough expressive for describing the scenario that relates an entity to a particular value in a particular period and according to a particular context • ✦ Past works in ontology engineering giving fundamental bases in that area: Boella et al. (2007). Roles, an interdisciplinary perspective. Special Issue of the Journal of Applied Ontology, 2 (2): 81-207. ISSN: 1570-5838 ✦ Guarino et al. (2002). Evaluating ontological decisions with OntoClean. In Communications of the ACM, 45 (2): 61-65. DOI: 10.1145/503124.503150 ✦ Masolo et al. (2004). Social Roles and their Descriptions. In Proceedings of KR 2004 • ✦ Requirements for a (Linked Data) model: expressible, to handle the above scenario entirely ✦ compact, easy to write and understand ✦ flexible, to allow the definition of new values without compromising the consistency of the model, even according to multiple triplestores made available by different agent
  • 22. Towards a solution: time-indexed situation • The time-indexed situation http://www.ontologydesignpatterns.org/cp/owl/timeindexedsituation.owl is an ontological pattern that allows one to link a subject to a time-dependent description of a situation ✦ In this context, a situation is defined as a view on a set of entities (e.g. a relational context) • It is able to handle our scenario, but it is still too abstract both as a model and in terms of its terminology
  • 23. Towards a solution: time-indexed situation • The time-indexed situation http://www.ontologydesignpatterns.org/cp/owl/timeindexedsituation.owl is an ontological pattern that allows one to link a subject to a time-dependent description of a situation ✦ In this context, a situation is defined as a view on a set of entities (e.g. a relational context) • It is able to handle our scenario, but it is still too abstract both as a model and in terms of its terminology :peroni a foaf:Person ; foaf:name “Silvio Peroni” . :uni-of-oxford a foaf:Organization ; foaf:name “University of Oxford” . :intern a swc:Role .
  • 24. Towards a solution: time-indexed situation • The time-indexed situation http://www.ontologydesignpatterns.org/cp/owl/timeindexedsituation.owl is an ontological pattern that allows one to link a subject to a time-dependent description of a situation ✦ In this context, a situation is defined as a view on a set of entities (e.g. a relational context) • It is able to handle our scenario, but it is still too abstract both as a model and in terms of its terminology :peroni a foaf:Person ; foaf:name “Silvio Peroni” . :uni-of-oxford a foaf:Organization ; foaf:name “University of Oxford” . :intern a swc:Role . :peroni tisit:hasTimeIndexedSetting [ a tisit:TimeIndexedSituation ; tisit:forEntity :intern,:uni-of-oxford ; tisit:atTime [ a ti:TimeInterval ; ti:hasIntervalStartDate “2012-06” ; ti:hasIntervalEndDate “2012-12” ] ] .
  • 25. Towards a solution: time-indexed situation • The time-indexed situation http://www.ontologydesignpatterns.org/cp/owl/timeindexedsituation.owl is an ontological pattern that allows one to link a subject to a time-dependent description of a situation ✦ In this context, a situation is defined as a view on a set of entities (e.g. a relational context) • It is able to handle our scenario, but it is still too abstract both as a model and in terms of its terminology :peroni a foaf:Person ; foaf:name “Silvio Peroni” . :uni-of-oxford a foaf:Organization ; foaf:name “University of Oxford” . :intern a swc:Role . Entity :peroni tisit:hasTimeIndexedSetting [ a tisit:TimeIndexedSituation ; tisit:forEntity :intern,:uni-of-oxford ; tisit:atTime [ Value Context a ti:TimeInterval ; Time ti:hasIntervalStartDate “2012-06” ; ti:hasIntervalEndDate “2012-12” ] ] .
  • 26. Towards a solution: time-indexed situation • The time-indexed situation http://www.ontologydesignpatterns.org/cp/owl/timeindexedsituation.owl is an ontological pattern that allows one to link a subject to a time-dependent description of a situation ✦ In this context, a situation is defined as a view on a set of entities (e.g. a relational context) • It is able to handle our scenario, but it is still too abstract both as a model and in terms of its terminology :peroni a foaf:Person ; foaf:name “Silvio Peroni” . :uni-of-oxford a foaf:Organization ; foaf:name “University of Oxford” . :intern a swc:Role . Different interpretations: Entity :peroni tisit:hasTimeIndexedSetting [ 1. :peroni related at a particular period to :uni-of- a tisit:TimeIndexedSituation ; oxford that has role :intern tisit:forEntity :intern,:uni-of-oxford ; 2. :peroni worked at a particular period with tisit:atTime [ Value Context somebody having the role of :intern within :uni-of- a ti:TimeInterval ; oxford Time ti:hasIntervalStartDate “2012-06” ; 3. :peroni was an :intern within :uni-of-oxford during ti:hasIntervalEndDate “2012-12” ] ] . a particular period
  • 27. Towards a solution: time-indexed situation • The time-indexed situation http://www.ontologydesignpatterns.org/cp/owl/timeindexedsituation.owl is an ontological pattern that allows one to link a subject to a time-dependent description of a situation ✦ In this context, a situation is defined as a view on a set of entities (e.g. a relational context) • It is able to handle our scenario, but it is still too abstract both as a model and in terms of its terminology :peroni a foaf:Person ; foaf:name “Silvio Peroni” . :uni-of-oxford a foaf:Organization ; foaf:name “University of Oxford” . :intern a swc:Role . Different interpretations: Entity :peroni tisit:hasTimeIndexedSetting [ 1. :peroni related at a particular period to :uni-of- a tisit:TimeIndexedSituation ; oxford that has role :intern tisit:forEntity :intern,:uni-of-oxford ; 2. :peroni worked at a particular period with tisit:atTime [ Value Context somebody having the role of :intern within :uni-of- a ti:TimeInterval ; oxford Time ti:hasIntervalStartDate “2012-06” ; 3. :peroni was an :intern within :uni-of-oxford during ti:hasIntervalEndDate “2012-12” ] ] . a particular period
  • 28. Towards a solution: time-indexed situation • The time-indexed situation http://www.ontologydesignpatterns.org/cp/owl/timeindexedsituation.owl is an ontological pattern that allows one to link a subject to a time-dependent description of a situation ✦ In this context, a situation is defined as a view on a set of entities (e.g. a relational context) • It is able to handle our scenario, but it is still too abstract both as a model and in terms of its terminology :peroni a foaf:Person ; foaf:name “Silvio Peroni” . :uni-of-oxford a foaf:Organization ; foaf:name “University of Oxford” . :intern a swc:Role . Different interpretations: Entity :peroni tisit:hasTimeIndexedSetting [ 1. :peroni related at a particular period to :uni-of- a tisit:TimeIndexedSituation ; oxford that has role :intern tisit:forEntity :intern,:uni-of-oxford ; 2. :peroni worked at a particular period with tisit:atTime [ Value Context somebody having the role of :intern within :uni-of- a ti:TimeInterval ; oxford Time ti:hasIntervalStartDate “2012-06” ; 3. :peroni was an :intern within :uni-of-oxford during ti:hasIntervalEndDate “2012-12” ] ] . a particular period
  • 29. Towards a solution: time-indexed situation • The time-indexed situation http://www.ontologydesignpatterns.org/cp/owl/timeindexedsituation.owl is an ontological pattern that allows one to link a subject to a time-dependent description of a situation ✦ In this context, a situation is defined as a view on a set of entities (e.g. a relational context) • It is able to handle our scenario, but it is still too abstract both as a model and in terms of its terminology :peroni a foaf:Person ; foaf:name “Silvio Peroni” . :uni-of-oxford a foaf:Organization ; foaf:name “University of Oxford” . :intern a swc:Role . Different interpretations: Entity :peroni tisit:hasTimeIndexedSetting [ 1. :peroni related at a particular period to :uni-of- a tisit:TimeIndexedSituation ; oxford that has role :intern tisit:forEntity :intern,:uni-of-oxford ; 2. :peroni worked at a particular period with tisit:atTime [ Value Context somebody having the role of :intern within :uni-of- a ti:TimeInterval ; oxford Time ti:hasIntervalStartDate “2012-06” ; 3. :peroni was an :intern within :uni-of-oxford during ti:hasIntervalEndDate “2012-12” ] ] . a particular period that’s fine, but how to understand that?
  • 31. Time-indexed value in context • Our time-indexed value in context (TVC) http://www.essepuntato.it/2012/04/tvc extends the time-indexed situation pattern so as to fully describe the four different entities involved in these kinds of scenarios: ✦ the entity having some value ✦ the value had by someone ✦ the time period during which the entity has that value ✦ the particular context that characterises the act of having that value
  • 32. Time-indexed value in context • Our time-indexed value in context (TVC) http://www.essepuntato.it/2012/04/tvc extends the time-indexed situation pattern so as to fully describe the four different entities involved in these kinds of scenarios: ✦ the entity having some value ✦ the value had by someone ✦ the time period during which the entity has that value this class is a particular kind of time- ✦ the particular context that characterises the act of indexed situation (i.e. a subclass of having that value tisit:TimeIndexedSituation) that represents an hub linking the entity having a particular value (hasValue), the value itself (withValue) and the temporal (atTime) and contextual (withinContext) extents on which the entity-value relationship depends
  • 33. Time-indexed value in context • Our time-indexed value in context (TVC) http://www.essepuntato.it/2012/04/tvc extends the time-indexed situation pattern so as to fully describe the four different entities involved in these kinds of scenarios: ✦ the entity having some value ✦ the value had by someone ✦ the time period during which the entity has that value this class is a particular kind of time- ✦ the particular context that characterises the act of indexed situation (i.e. a subclass of having that value tisit:TimeIndexedSituation) that :peroni tvc:hasValue [ represents an hub linking the entity a tvc:ValueInTime ; having a particular value (hasValue), tvc:withValue :intern ; the value itself (withValue) and the tvc:withinContext :uni-of-oxford ; temporal (atTime) and contextual tvc:atTime [ (withinContext) extents on which the a ti:TimeInterval ; ti:hasIntervalStartDate “2012-06” ; entity-value relationship depends ti:hasIntervalEndDate “2012-12” ] ] .
  • 34. Time-indexed value in context • Our time-indexed value in context (TVC) http://www.essepuntato.it/2012/04/tvc extends the time-indexed situation pattern so as to fully describe the four different entities involved in these kinds of scenarios: ✦ the entity having some value ✦ the value had by someone ✦ the time period during which the entity has that value this class is a particular kind of time- ✦ the particular context that characterises the act of indexed situation (i.e. a subclass of having that value tisit:TimeIndexedSituation) that Entity :peroni tvc:hasValue [ represents an hub linking the entity a tvc:ValueInTime ; having a particular value (hasValue), tvc:withValue :intern ; Value the value itself (withValue) and the tvc:withinContext :uni-of-oxford ; Context temporal (atTime) and contextual tvc:atTime [ (withinContext) extents on which the a ti:TimeInterval ; Time ti:hasIntervalStartDate “2012-06” ; entity-value relationship depends ti:hasIntervalEndDate “2012-12” ] ] .
  • 35. Querying a TVC-based model via SPARQL
  • 36. Querying a TVC-based model via SPARQL • Give me all the values had by :peroni SELECT DISTINCT ?value WHERE { :peroni tvc:hasValue/tvc:withValue ?value }
  • 37. Querying a TVC-based model via SPARQL • Give me all the values had by :peroni SELECT DISTINCT ?value WHERE { :peroni tvc:hasValue/tvc:withValue ?value } • Give me all the roles had by :peroni at 24 August 2010 (i.e. aquired before and lost after that date) in the context of :uni-of-bologna SELECT DISTINCT ?value WHERE { ?value a swc:Role . :peroni tvc:hasValue [ a tvc:ValueInTime ; tvc:withValue ?value ; tvc:withinContext :uni-of-bologna ; tvc:atTime [ a ti:TimeInterval ; ti:hasIntervalStartDate ?start ; ti:hasIntervalEndDate ?end ] ] FILTER( xsd:dateTime(?start) <= “2010-08-24T00:00:00Z” && xsd:dateTime(?end) > “2010-08-25T00:00:00Z” ) }
  • 39. Reusing external classes as values • The Portal Ontology defines a hierarchy of roles in form of classes, which can be used with TVC :person1 tvc:hasValue [ a tvc:ValueInTime ; tvc:withValue portal:Affiliated-Person ] . :person2 tvc:hasValue [ a tvc:ValueInTime ; tvc:withValue portal:Student ] . :person3 tvc:hasValue [ a tvc:ValueInTime ; tvc:withValue portal:PhD-Student ] . Statements defined in the Portal Ontology portal:Student rdfs:subClassOf portal:Affiliated-Person . portal:PhD-Student rdfs:subClassOf portal:Student .
  • 40. Reusing external classes as values • The Portal Ontology defines a hierarchy of roles in form of classes, which can be used with TVC :person1 tvc:hasValue [ a tvc:ValueInTime ; tvc:withValue portal:Affiliated-Person ] . :person2 tvc:hasValue [ a tvc:ValueInTime ; tvc:withValue portal:Student ] . :person3 tvc:hasValue [ a tvc:ValueInTime ; tvc:withValue portal:PhD-Student ] . Statements defined in the Portal Ontology portal:Student rdfs:subClassOf portal:Affiliated-Person . portal:PhD-Student rdfs:subClassOf portal:Student . • Give me of any person affiliated with :uni-of-bologna SELECT DISTINCT ?person WHERE { ?person tvc:hasValue [ a tvc:ValueInTime ; tvc:withValue ?aff ; tvc:withinContext :uni-of-bologna ] . { SELECT ?aff WHERE { { ?aff a owl:Class . FILTER(?aff = portal:Affiliated-Person) } UNION { ?aff rdfs:subClassOf+ portal:Affiliated-Person } } } }
  • 42. Constructing second-order inferences • It is sometimes desirable to reuse ontologies that specify categories (e.g. roles) through properties rather than classes
  • 43. Constructing second-order inferences • It is sometimes desirable to reuse ontologies that specify categories (e.g. roles) through properties rather than classes ✦ E.g. BIBO, available at http://http://bibliontology.com dcterms:contributor a owl:ObjectProperty . bibo:translator rdfs:subPropertyOf dcterms:contributor . bibo:editor rdfs:subPropertyOf dcterms:contributor . bibo:director rdfs:subPropertyOf dcterms:contributor .
  • 44. Constructing second-order inferences • It is sometimes desirable to reuse ontologies that specify categories (e.g. roles) through properties rather than classes ✦ E.g. BIBO, available at http://http://bibliontology.com dcterms:contributor a owl:ObjectProperty . bibo:translator rdfs:subPropertyOf dcterms:contributor . bibo:editor rdfs:subPropertyOf dcterms:contributor . bibo:director rdfs:subPropertyOf dcterms:contributor . • These properties can be used as objects of tvc:withValue statements (by means of OWL 2 punning) _:person a foaf:Person ; tvc:hasValue [ tvc:withValue bibo:translator ; tvc:withinContext _:document ; ... ] .
  • 45. Constructing second-order inferences • It is sometimes desirable to reuse ontologies that specify categories (e.g. roles) through properties rather than classes ✦ E.g. BIBO, available at http://http://bibliontology.com dcterms:contributor a owl:ObjectProperty . bibo:translator rdfs:subPropertyOf dcterms:contributor . bibo:editor rdfs:subPropertyOf dcterms:contributor . bibo:director rdfs:subPropertyOf dcterms:contributor . • These properties can be used as objects of tvc:withValue statements (by means of OWL 2 punning) _:person a foaf:Person ; tvc:hasValue [ tvc:withValue bibo:translator ; tvc:withinContext _:document ; ... ] . • Moreover, it is possible to construct second-order inferences starting from TVC descriptions CONSTRUCT { ?doc ?property ?person } WHERE { ?doc a foaf:Document . ?person a foaf:Person ; tvc:hasValue [ tvc:withValue ?property ; tvc:withinContext ?doc ] { SELECT ?property WHERE { { ?property a owl:ObjectProperty . FILTER(?property = dcterms:contributor) } UNION { ?property rdfs:subPropertyOf+ dcterms:contributor } } }
  • 46. Applying TVC to the Semantic Publishing domain
  • 47. PRO and PSO: ontologies for agent’s roles and document statuses Entity Value Context Time
  • 48. PRO and PSO: ontologies for agent’s roles and document statuses Entity Context Value Time
  • 49. PRO and PSO: ontologies for agent’s roles and document statuses Entity Entity Value Context Context Value Time Time
  • 50. PRO and PSO: ontologies for agent’s roles and document statuses Entity Context Entity Context Value Value Time Time
  • 52. Examples :person pro:holdsRoleInTime [ a pro:RoleInTime ; as author of two different papers pro:withRole pro:author ; pro:relatesToDocument :paper1 , :paper2 ] ,
  • 53. Examples :person pro:holdsRoleInTime [ a pro:RoleInTime ; as author of two different papers pro:withRole pro:author ; pro:relatesToDocument :paper1 , :paper2 ] , [ a pro:RoleInTime ; as affiliate of the University of Bologna for the first paper pro:withRole pro:affiliate ; pro:relatesToDocument :paper1 ; pro:relatesToOrganization :uni-of-bologna ] ,
  • 54. Examples :person pro:holdsRoleInTime [ a pro:RoleInTime ; as author of two different papers pro:withRole pro:author ; pro:relatesToDocument :paper1 , :paper2 ] , [ a pro:RoleInTime ; as affiliate of the University of Bologna for the first paper pro:withRole pro:affiliate ; pro:relatesToDocument :paper1 ; pro:relatesToOrganization :uni-of-bologna ] , [ a pro:RoleInTime ; as affiliate of the University of Oxford for the second paper pro:withRole pro:affiliate ; pro:relatesToDocument :paper2 ; pro:relatesToOrganization :uni-of-oxford ] .
  • 55. Examples :person pro:holdsRoleInTime [ a pro:RoleInTime ; as author of two different papers pro:withRole pro:author ; pro:relatesToDocument :paper1 , :paper2 ] , [ a pro:RoleInTime ; as affiliate of the University of Bologna for the first paper pro:withRole pro:affiliate ; pro:relatesToDocument :paper1 ; pro:relatesToOrganization :uni-of-bologna ] , [ a pro:RoleInTime ; as affiliate of the University of Oxford for the second paper pro:withRole pro:affiliate ; pro:relatesToDocument :paper2 ; pro:relatesToOrganization :uni-of-oxford ] . :paper1 pso:holdsStatusInTime
  • 56. Examples :person pro:holdsRoleInTime [ a pro:RoleInTime ; as author of two different papers pro:withRole pro:author ; pro:relatesToDocument :paper1 , :paper2 ] , [ a pro:RoleInTime ; as affiliate of the University of Bologna for the first paper pro:withRole pro:affiliate ; pro:relatesToDocument :paper1 ; pro:relatesToOrganization :uni-of-bologna ] , [ a pro:RoleInTime ; as affiliate of the University of Oxford for the second paper pro:withRole pro:affiliate ; pro:relatesToDocument :paper2 ; pro:relatesToOrganization :uni-of-oxford ] . :paper1 pso:holdsStatusInTime [ a pso:StatusInTime ; paper submitted for publication pso:withStatus pso:submitted ; tvc:atTime [ ti:hasIntervalStartDate “2009-04-24T13:18:21Z”^^xsd:dateTime ] ; pso:isAquiredAsConsequenceOf :author-submission-event ] ,
  • 57. Examples :person pro:holdsRoleInTime [ a pro:RoleInTime ; as author of two different papers pro:withRole pro:author ; pro:relatesToDocument :paper1 , :paper2 ] , [ a pro:RoleInTime ; as affiliate of the University of Bologna for the first paper pro:withRole pro:affiliate ; pro:relatesToDocument :paper1 ; pro:relatesToOrganization :uni-of-bologna ] , [ a pro:RoleInTime ; as affiliate of the University of Oxford for the second paper pro:withRole pro:affiliate ; pro:relatesToDocument :paper2 ; pro:relatesToOrganization :uni-of-oxford ] . :paper1 pso:holdsStatusInTime [ a pso:StatusInTime ; paper submitted for publication pso:withStatus pso:submitted ; tvc:atTime [ ti:hasIntervalStartDate “2009-04-24T13:18:21Z”^^xsd:dateTime ] ; pso:isAquiredAsConsequenceOf :author-submission-event ] , [ a pso:StatusInTime ; paper is under review pso:withStatus pso:under-review ; tvc:atTime [ ti:hasIntervalStartDate “2009-04-26T12:00:00Z”^^xsd:dateTime ; ti:hasIntervalEndDate “2009-05-27T17:38:01Z”^^xsd:dateTime ] ; pso:isAquiredAsConsequenceOf :editors-send-paper-to-reviewers-event ] ; pso:isLostAsConsequenceOf :reviewers-complete-the-reviews-event ] .
  • 58. Conclusions and future directions • Time and context change the way of modelling domains through OWL ✦ humans acting in specific roles ✦ things processed in phases • Linked data models should be improved when needed by using time- and context- based specifications for roles and statuses • In the domain of scholarly publishing, we proposed the Publishing Roles Ontology (PRO) and the Publishing Status Ontology (PSO) – both part of SPAR – and we illustrated how they provide lightweight and easy integration of time- and context-related features • They implement the Time-indexed Value in Context (TVC), i.e. the ontological pattern we proposed to deal with temporal and contextual issues • Future directions: ✦ to study integration paths between other well-known ontologies through TVC ✦ development of APIs so as to use the pattern within Java and Python applications
  • 59. Thanks for your attention

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