A Critique of the Proposed National Education Policy Reform
Genes & Genetic Disease
1. Genes & Genetic Disease
Touro University Nevada
Patricia Strobehn, MSN, APRN, FNP-BC
Assistant Professor, School of Nursing
2. History of Genetics
• Gregor Mendel was the founder of Modern Genetics
• Discovered that chromosomes contain genes
• Humans have between 20,000-25,000 genes
• 1/3 of inpatient pediatric patients are children with genetic
disease
3. DNA Overview
• Double Helix is made of 4 nitrogenous bases – A,C,G,T
• Adenine, Cystosine, Guanine, Thymine
• Each DNA sub-unit is called a nucleotide
• DNA provides a code for the body’s proteins
• These Proteins form polypeptides
• Polypeptides are made out of the 20 possible amino acids
• The sequence of three bases are called Codons
• DNA is formed and replicated in the cell nucleus
4. Replication
• The DNA strand is untwisted and unzipped, the single
strand acts a template for replication.
• DNA must be able to replicate itself accurately during cell
division or mutations can occur.
• DNA polymerase pairs the complimentary bases together
• Accurate replication is the consistent pairing of A,C,G,T
• Complementary base pairing is the key to accurate
replication.
• Alterations in DNA sequencing can lead to disease
6. Replication Q & A
Which information is correct regarding DNA polymerase?
DNA polymerase functions to:
1. Signal the end of a gene.
2. Pull apart a portion of a DNA strand.
3. Add the correct nucleotides to a DNA strand.
4. Provide a template for the sequence of mRNA nucleotides.
7. Gene Mutation
• A mutation is an inherited alteration of genetic material.
• Usually a result of inaccurate replication
• Common types of Gene Mutations include:
Base Pair Substitution
Frame-shift Mutation
• Mutagens also alter DNA
• https://www.youtube.com/watch?v=eDbK0cxKKsk
8. Transcription
• Transcription is the process by which RNA is synthesized
from a DNA template.
• RNA is synthesized from the DNA template via RNA
polymerase.
• RNA polymerase binds to the promoter site on DNA.
• DNA specifies a sequence of mRNA.
• Transcription continues until the termination sequence is
reached.
• mRNA then moves out of the nucleus and into the
cytoplasm.
• Gene splicing occurs.
• Introns and extrons
10. Translation
• Is the process by which RNA directs the synthesis of
a polypeptide via the interaction with transfer RNA
(tRNA).
• tRNA contains a sequence of nucleotides (anticodon)
complementary to the triad of nucleotides on the
mRNA strand (codon).
• Ribosome is the site of protein synthesis.
• Ribosome helps mRNA and tRNA make polypeptides.
• When ribosome arrives at a termination signal on the
mRNA sequence, translation and polypeptide formation
cease.
11. Translation Q & A
At what site does protein synthesis occur?
The site of protein synthesis is the:
1. Codon
2. Intron
3. Ribosome
4. Anticodon
12. Chromosomes
• Somatic cells
• Contain 46 chromosomes (23 pairs)
• One member from the mother; one from the father
• Diploid cells
• Gametes
• Sperm and egg cells
• Contain 23 chromosomes
• Haploid cells
• One member of each chromosome pair
• Meiosis
• Formation of haploid cells from diploid cells
13. Chromosomes
• Autosomes
• Are the first 22 of the 23 pairs of chromosomes in males and
females.
• The two members are virtually identical and are thus said to be
homologous.
• Sex chromosomes
• Make up the remaining pair of chromosomes.
• In females, it is a homologous pair (XX).
• In males, it is a nonhomologous pair (XY).
• Karyotype
• The length and centromere location determine the ordered
display of chromosomes.
14. Chromosomal Abnormalities
• Effects may or may not have serious consequences.
• Chromosome breakage
• If a chromosome break occurs, then the break is usually repaired
with no damage.
• Breaks can stay or can heal in a way that alters the structure of
the chromosome.
• Can occur spontaneously.
• Agents of chromosome breakage include Ionizing radiation,
chemicals, and viruses.
15. Chromosomal Abnormalities
• Deletions
• Chromosome breakage or loss of DNA
• Example: Cri du chat syndrome or “cry of the cat”
• Low birth weight, mentally challenged, and microcephaly
• Duplications
• Excess genetic material
• Usually have less serious consequences
• Inversion
• Chromosomal rearrangement in which a chromosome
segment is inverted: ABCDEFG becomes ABEDCFG
• Usually affects offspring
16. Chromosomal Abnormalities
• Translocation
• Is the interchange of genetic material between
nonhomologous chromosomes.
• Types of translocation
• Robertsonian: Long arms of two nonhomologous
chromosomes fuse at the centromere, forming a single
chromosome; is common in Downs syndrome.
• Reciprocal: Breaks take place in two different
chromosomes, and the material is exchanged
• Fragile Sites
• Chromosomes develop breaks and gaps
17. Genetic Transmission
• Humans are diploid organisms
• Chromosomal pairs are made from both Paternal and
Maternal DNA – XX XY
• Homozygous pairs- Identical genes
• Heterozygous pairs – Non- identical genes
• Genotype - The composition of genes at a specific location
• Phenotype - The outward appearance of an individual is a
result of both: the persons genotype and the environment.
• Dominant - The allele whose effects are observable
• Recessive – The allele whose effects are hidden
• Carrier – is an individual who has a disease-causing allele but
is phenotypically normal.
18. Autosomal Inheritance
Dominant
• Rare: Observed in less
than 1:500
• Does not skip
generations
• One parent has the
Phenotype
• Ex: Achondroplasia
Recessive
• Carriers are typically
phenotypically normal
• Can skip generations
• Requires a homozygous
recessive allele to
actually be expressed
• EX. Cystic Fibrosis
19. X- Linked Inheritance
• Y chromosome only contains a few dozen genes.
• Most of the sex-linked traits are located on the X-
Chromosome
• X-linked recessive diseases are much more common
• Females receive two long x-linked chromosomes and Males
receive one long x-linked chromosome and one short y.
• Males are more frequently affected
20. Multifactorial Inheritance
• Multifactorial Trait -Traits or disease in which variation is
thought to be caused by the combined effects of multiple
genes.
• Ex: Height: Phenotype is determined by genotype. >100 genes
have been identified to contribute to height.
• Ex: Blood Pressure: Phenotype is determined by genotype and
other environmental factors such as diet, exercise and stress.
• Twin Studies vs Adoption Studies
21. Multifactorial Disorders
• Coronary Heart Disease
• Accounts for 25% of all deaths in the U.S.
• Caused by Atherosclerosis
• Risk Factors: obesity, smoking, HTN, elevated cholesterol levels
and a family history
• An individual with a positive family history is 2-7x more likely to
have heart disease
• Risk increases with more affected family members
• Risk increases to 13x more likely if two first-degree relatives were
affected by CHD before the age of 55
• Women do develop at a later age than men
22. Multifactorial Disorders
• Familial Hypercholesterolemia (FH)
• LDL Receptor gene was discovered in 1894
• FH is caused by a reduced number of functional LDL receptors
• Autosomal Dominant FH accounts for 5% of Myocardial
Infarctions in individuals <60 years old.
• Heterozygotes: 1:500 individuals have cholesterol levels that are
usually twice the normal range.
• Homozygotes: 1:1,000,000 have cholesterol levels that range
from 600-1,200. Most experience MI’s before age 20.
• Individuals develop Xanthomas (fatty deposits) due to excess
levels of circulating cholesterol.
23. Multifactorial Disorders
• Breast Cancer
• Affects 12% of women by age 85 years old
• Risk doubles with one affected first-degree relative
• Autosomal Dominant individuals account for 5% of all breast CA
• BRCA1 and BRCA2 female carriers have a 50-80% overall lifetime risk
• BRCA2 male carriers have a 6% overall lifetime risk (100x other men)
• Colorectal Cancer
• Second leading cause of Cancer in the U.S.
• 1:20 Americans will be affected
• Risk is 2-3x more with one affected first-degree relative
24. Multifactorial Disorders
• Diabetes Mellitus
• Siblings of those with DM have a higher rate of susceptibility
• TCF7L2 gene has the most significance in regards to Type 2
• Most common risk factors for Type 2 are family history and
obesity
• Obesity
• Strong evidence exists for both heredity and environmental risk
factors
• Four adoption studies showed that body weights of adopted
individuals correlated significantly with their natural parent’s
body weights and not with their adoptive parent’s body weights.
25. Multifactorial Disorders
• Alzheimer Disease
• Risk doubles in those who have an affected first-degree relative
• Most cases do not appear to be caused by any single-loci
• Early onset occurs before age 65
• Early onset attributed to mutations in amyloid-beta precursor protein
(APP), presenilin 1 (PS1) and presenilin 2 (PS2)
• Common late onset occurs after age 65
• Later onset attributed to allelic variation of apolipoprotein E (APOE)
• Europeans and Japanese are at other risk than other populations
26. Multifactorial Disorders
• Alcoholism
• 10% of adult Males are affected
• 3-5% of Females are affected
• Risk of developing alcoholism of those with one affected parent is 3-5x
higher than those whose parents are unaffected
• Monozygotic twin studies have a concordance rate >60%
• Adoptive studies show that the offspring of an alcoholic parent, even
when raised by non-alcoholic parents have 4x the chance of developing
alcoholism
• Those with the ALDHY2 gene are much less likely to become alcoholics
due to unpleasant effects – considered the “protective” allele.
27. Multifactorial Disorders
• Schizophrenia
• Risk of Schizophrenia if one parent is affected is 8-10%
• Monozygotic twin studies have a concordance rate of 47%
• Bipolar Disorder
• Risk of Bipolar disorder if one parent is affected is 5-10%
• Monozygotic twins have a concordance rate of 79%
• Some loci have been identified due to pharmaceutical research
• Examples include monoamine oxidase A (MAOA), the serotonin
transporter (5HTT) and catechol-O-methytransferase (COMT)
28. Genetic Testing
Carrier Screening
• Identifies heterozygous
carriers for recessive
diseases.
• People use to help make
reproductive decisions
• Cystic fibrosis, sickle-cell
disease, Tay-Sachs disease
• Carrier Screening has
reduced the prevalence of
some of these diseases
over the past two decades.
Prenatal Diagnosis
• Amniocentesis at 16 weeks
• Chorionic villus sampling
(CVS) at 10-12 weeks
• Pre-implantation genetic
diagnosis (PGD) is carried
out on early embryos prior
to implantation
• Analysis of Fetal DNA in
maternal circulation
available as early as 6
weeks.
• Newborn Screening: PKU
29. Autosomal Aneuploidy
• Down syndrome
• Is the best-known example of aneuploidy.
• Trisomy 21
• Occurs 1 in 800 live births.
• Manifestations: Mental challenges; low nasal bridge;
epicanthal folds; protruding tongue; flat, low-set ears;
and poor muscle tone.
• Risk increases with maternal age.
• Has an increased risk of congenital heart disease,
respiratory infections, and leukemia.
31. Sex Chromosome Aneuploidy
• Turner syndrome
• Females have only one X chromosome
• Denoted as karyotype 45,X.
• Characteristics include:
• Absence of ovaries (sterile)
• Short stature
• Webbing of the neck
• Widely spaced nipples
• High number of aborted fetuses
• X chromosome that is usually inherited from the
mother
• Occurs 1 in 2500 female births.
• Teenagers receive estrogen.
33. Sex Chromosome Aneuploidy
• Klinefelter syndrome
• Individuals with at least one Y and two X chromosomes.
• Characteristics include:
• Male appearance
• Femalelike breasts (gynecomastia)
• Small testes
• Sparse body hair
• 1 in 1000 male births
• Some individuals can be XXXY and XXXXY; will have male
appearance; abnormalities will increase with each X; can
also have an extra Y chromosome.
• Disorder increases with the mother’s age.
35. Need to know!!!
• How to describe the genetic abnormalities and resulting
clinical abnormalities associated with the following diseases:
Down syndrome, Turner syndrome, Klinefelter syndrome, cri
du chat syndrome, Huntington disease, cystic fibrosis,
neurofibromatosis, hemophilia, and Duchenne muscular
dystrophy
• The difference between a genotype and phenotype
• How to describe the following elements of inheritance:
autosomal, sex-linked, carrier, dominant, and recessive.
• Know the cause and possible outcomes for the following
mutations: base-pair substitution, frameshift substitution,
spontaneous mutation, and mutational hotspots.
36. Need to know!!!
• How to Identify and describe the familial tendencies and
contributing environmental factors in the following diseases:
coronary artery disease (CAD), hypercholesterolemia,
hypertension, colorectal cancer, diabetes, breast cancer, and
obesity.
• How to Identify and describe the following complex
multifactorial diseases: Alzheimer disease, alcoholism,
schizophrenia, and bipolar disorder.
Gregor Mendel is considered the founder of Modern Genetics. He was a Botonist who’s large body of work consisted of breeding the pea plant. All organisms except for protozoa use the exact same DNA codes.
Genes ultimately influence all aspects of body structure and function. Errors in these genes lead to recognizable disease. HTN, DM, CAD, and CA in adults have an underlying genetic component. To date: over 21,000 genes have actually been identified and cataloged. Genetic testing is on the rise.
Each DNA subunit is called a Nucleotide. Each Nucleotide contains one deoxyribose molecule, one phosphate group, and one base.
DNA is formed in the and replicated in the nucleus.
You can see here that there DNA is being made via replication. It starts with an old DNA strand that is uncoiled. DNA Polymerase will then add the appropriate nucleotides to make a complimentary pair and add the correct nucleotide to the new strand. Complementary base pairing is the consistent pairing of Adenine, Cystosine, Guanine and Thymine. During this process the unpaired base will attract a complimentary nucleotide. For example a single strand with a sequence of bases ATTGCT will attract its complimentary pairs TAACGA.
ANSWER AND RATIONALE: 3. Add the correct nucleotides to a DNA strand. This enzyme functions to add correct nucleotides to the DNA strand, to edit incorrect nucleotides, and enhance the accuracy of DNA replication.
1. Termination or nonsense codons signal the end of a gene.
2. RNA polymerase binds to a promoter site on DNA and pulls apart a portion of the DNA strand.
4. One of the DNA strands exposed by the action of RNA polymerase provides a template for the sequence of mRNA nucleotides
Some mutations are too small to be observed under the microscope. Some are easily visible. Base Pair Substitutions are very common in which one base pair is replaced by another. Frame-shift mutation is also very common. It involves the insertion or deletion of one or more base-pairs.
Mutagens are agents that alter the DNA molecule. Examples of Mutagens include Nuclear Fallout, Radiation and Chemicals. Basically, they alter the DNA molecule. There are certain DNA sequences that are particularly susceptible to mutagens. A example of this are genetic sequences that consist of Cytosine and are followed by a Guanine base (CG).
https://www.youtube.com/watch?v=eDbK0cxKKsk
The transport of the DNA code from the nucleus to the cytoplasm involves: transcription and translation. Why do we need to know about transcription? Transcription is important in gene expression. For example, certain proteins function as receptors, enzymes or biomarkers. Some hormones can involve transcription factors
You can see here that the RNA is being synthesized from the DNA template via RNA polymerase. The RNA polymerase binds to the promoter site on DNA. This will continue until the termination sequence is reached. Then mRNA then moves out of the nucleus and into the cytoplasm.
ANSWER AND RATIONALE: 3. Ribosome. The ribosome is the site of actual protein synthesis.
The codon is a set of three adjacent nucleotides or a triplet that constitutes the genetic code for a particular amino acid that is to be added to a polypeptide chain in the synthesis of a protein.
2. The intron is an RNA sequence that has been removed by enzymatic action prior to translation.
4. The anticodon is a set of three adjacent nucleotides that undergo base pairing with the appropriate codon in the mRNA.
Infant with cri du chat for example has a 5p deletion.
4 main types of chromosomal abnormalities
Deletion, Duplication, Inversion and Reciprocal Translocation
Fragile sites (cont’d)
Fragile X syndrome
Site is on the long arm of the X chromosome; has an elevated number of repeated DNA sequences.
Is associated with being mentally challenged; is second in occurrence to Down syndrome.
Humans are diploid organisms, each chromosome is represented twice – one from the Father and one from the Mother. At each location there will be a pair of chromosomes that are paternal and maternal in origin. When these two genes are identical, the individual is homozygous at that specific location. When they are different, the individual is heterozygous at that location.
The penetrance of a trait is the percentage of the individuals who have a specific genotype and who also exhibit the expected Phenotype. There is also age-dependent penetrance, where the observable manifestations of the disease don’t show up until later in age. An example of this is Huntington Disease. It doesn’t usually manifest until around age 40 or later. It is a autosomal dominant condition. Features of the disease include progressive dementia and uncontrollable movement of the limbs. The term expressivity is used when referring to the extent or degree the observable phenotype is manifested.
Autosomal Dominant Inheritance is rare. One parent must have it for the child to also have it. Achondroplasia: Dwarfism
Autosomal Recessive Inheritance is also rare but there are more carriers. People are unaware that they have the potential to birth a child with the expressed trait. Cystic fibrosis occurs in 1:2500 births. 1:25 of the white population carries one copy of the allele.
There are some instances where new mutations can become expressed even when neither parent is a carrier.
Males are more frequently affected due to having a stronger influence from the Maternal x chromosome and little to no influence from the Paternal Chromosome to counteract the disease causing allele.
Mode of inheritance is often difficult to determine even from a pedigree. Complications like incomplete penetrance, variable expressivity, delayed age of onset and sex influenced traits make it difficult to determine the mode of inheritance even when evaluating a pedigree.
A correlation does exist between parents and children in regards to systolic and diastolic blood pressures. Nature versus Nurture is the environment that is often studied. (Monozygotic/identical) Twins were once thought as being the perfect “natural laboratory” to test the nature versus nurture theory, however in time, scientists realized that identical twins are actually treated more similarly and tend to seek the same types of environment than (Dizygotic/non-identical) twins and this inflated the apparent “strength” of their genes over other environmental factors.
Adoption Studies on the other hand provide the opposite perspectives. A child who was born to parents with schizophrenia but grows up with parents who don’t have the disease still has a 8% chance of contracting the same mental disorder as their birth parents regardless of their environment. This does show that there is a strong correlation of genetic influence and not just environment. Some precautions in interpreting adoptive studies still exists. Factors such as prenatal environment and adoption at a later age limit these studies.
CHD – Leading cause of death in both en and women. Accounts for 25% of all deaths in the United States. It is caused by atherosclerosis – a narrowing of the blood vessels as a result of lipid-laden lesions of the arteries resulting in reduced blood flow to the heart or brain causing a myocardial infarction or stroke. Risk Factors include obesity, smoking, hypertension, elevated cholesterol levels and a family history. Many studies are focusing on the genetic determination of various lipoproteins. i.e. LDL
Data compiled from 5 studies showed that 75% of Men with FH developed CAD by age 60 and 50% of those Men had a fatal MI by age 60.
FH is caused by a reduced number of functional LDL receptors.
How is FH caused? All cells require cholesterol as part of their plasma membrane. LDL-bound cholesterol is taken into the cell via endocytosis through these receptor sites, in Familial Hypercholesterolemia there is a reduced number of these functioning LDL receptor sites for cellular cholesterol uptake which results in increased levels of circulating cholesterol levels.
Heterozygotes: Only have of their LDL receptors actually function
Homozygotes: - since they have two identical dominant alleles, they have little to no functioning LDL receptor sites; resulting in high circulating levels of serum cholesterol.
Genes for autosomal dominant breast CA have been linked to chromosome 17 (BRCA1) and chromosome 13 (BRCA2).
Second leading cause of Cancer- second only to Lung Cancer
Etiology of DM is complex and not fully understood on the genetic level. We know it’s not strictly genetic in origin. An identical twin has only a 30-50% chance of also developing type 1 diabetes if their monozygotic twin has it. This implies some environmental component. Also there has been some research to imply that Type-1 can be triggered by certain viral infections as a result of activating an immune response.
Although most cases do not appear to be caused by any single-loci
The ALDHY2 gene causes a physiologic response that results in excessive accumulation of acetaldehyde after consumption that results in facial flushing, nausea, palpitations and lightheadedness.
Some loci have been identified due to pharmaceutical research i.e. serotonin, dopamine and noradrenaline systems.
Various methods of Prenatal diagnosis exist. They all screen for various disorders. Amniocentesis can screen for neural tube defects such as spina bifida and anencephaly by checking for the presence of alpha fetoprotein. CVS does involve in vitro cell culturing and has a 1% slightly higher fetal loss rate than amniocentesis. Analysis of fetal DNA can check for trisomy 21, 13, 18 and neural tube defects.
Genetic testing is helpful so that we can identify the presence or absence of a gene but you have to consider that many genetic diseases have incomplete penetrance and even if they are present. They might not actually manifest themselves.
Is the best-known example of aneuploidy.
Trisomy 21
Occurs 1 in 800 live births.
Manifestations: Mental challenges; low nasal bridge; epicanthal folds; protruding tongue; flat, low-set ears; and poor muscle tone.
Risk increases with maternal age.
Has an increased risk of congenital heart disease, respiratory infections, and leukemia.
Turner syndrome
Females have only one X chromosome
Denoted as karyotype 45,X.
Characteristics include:
Absence of ovaries (sterile)
Short stature
Webbing of the neck
Widely spaced nipples
High number of aborted fetuses
X chromosome that is usually inherited from the mother
Occurs 1 in 2500 female births.
Teenagers receive estrogen.
Characteristics include:
Male appearance
Femalelike breasts (gynecomastia)
Small testes
Sparse body hair
1 in 1000 male births
Feel free to message or email if you have any questions