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Board Review Week of September 28th
Genetics and Dysmorphology
Question 72
A 10-year-old boy (individual III,1 in the pedigree) (Item Q72A) presents for evaluation of ligamentous laxity and multiple joint
dislocations. The family history is notable for a father who has scoliosis and ligamentous laxity, a paternal aunt who has had retinal
detachments and mitral valve prolapse, and a paternal grandmother who had joint dislocations and now has osteoarthritis.




Based on   the family history, the MOST likely pattern of inheritance of this connective tissue disorder is
     a)     autosomal dominant
     b)     autosomal recessive
     c)     mitochondrial
     d)     X-linked dominant
     e)     X-linked recessive

Question 24
A female infant is born with unilateral cleft lip and palate. Findings on the remainder of the physical examination are normal, and
you inform the parents that this apparently is an isolated birth defect.

During counseling of the family about their risk for having another similarly affected child, the statement that you are MOST likely
to include is that
      a)    because the defect is isolated, their risk is no greater than that of any other couple
      b)    cleft lip with/without cleft palate is a multifactorial trait that has a 4% risk of recurrence
      c)    the recurrence risk can be estimated only after a chromosome analysis has been obtained
      d)    the risk is increased for future females, but not males
      e)    the risk is increased only if one of the parents had cleft lip with/without cleft palate

Question 88
You are discussing the common indications for chromosome analysis with a group of third-year medical students.

Of the following, the MOST appropriate statement to include in your discussion is that
     a)     a blood karyotype should be obtained in any newborn who has multiple congenital anomalies and growth retardation
     b)     a blood karyotype should be obtained only for a girl who has short stature if a buccal smear is negative
     c)     chromosome analysis is not necessary to confirm the diagnosis of Down syndrome if the major clinical features are
            present
     d)     chromosome analysis must be obtained to assess the reproductive risk for a woman who has a sibling who has trisomy
            21
     e)     routine chromosome analysis is adequate for the diagnosis of microdeletion syndromes, such as DiGeorge syndrome


Question 104
The pregnant mother of a 3-year-old girl in your practice is concerned because her obstetrician just told her that her serum alpha-
fetoprotein value is markedly increased.

Of the following, the MOST appropriate advice to give to this woman is that she should consider
     a)     having an ultrasonographic examination to date her pregnancy and to search for fetal anomalies
     b)     having another blood sample drawn to repeat the test
     c)     having chorionic villus sampling as soon as possible to determine the chromosome complement of the fetus
     d)     obtaining further testing only if she is older than age 35
     e)     being concerned only if there is a history of open neural tube defects in her family
Question 152
A newborn female has loose neck skin (Item Q152A) and nonpitting edema of the lower extremities (Item Q152B).




Of the following, the MOST appropriate evaluation for this infant is
     a)     blood chromosome analysis
     b)     magnetic resonance imaging of the brain
     c)     slitlamp ophthalmologic examination
     d)     ultrasonography of the liver
     e)     voiding cystourethrography


Question 136
A newborn has microcephaly, dysmorphic features (including a prominent forehead, protuberant ears, and micrognathia), bilateral
hip dislocation, clinodactyly, and a single transverse palmar crease bilaterally. Peripheral blood chromosome analysis reveals an
unbalanced translocation that results in partial trisomy 9.

Of the following, the MOST appropriate statement to include when discussing the diagnosis with the parents of this infant is that
     a)     chromosome analysis should be obtained on both parents to determine if they are balanced translocation carriers
     b)     chromosome analysis of their other children is unnecessary
     c)     mental development should be normal because their infant does not have a full trisomy
     d)     their risk for a similarly affected child in future pregnancies is very small
     e)     they are at increased risk for other trisomies (eg, Down syndrome) in future pregnancies

Question 216
A newborn female has a cardiac murmur. Before the cardiologist arrives to evaluate her, she has a seizure. Results of laboratory
testing include a serum calcium concentration of 5.0 mg/dL (1.25 mmol/L). Subsequently, echocardiography reveals an aortic arch
anomaly.

Of the following, the MOST appropriate test to obtain to aid in the diagnosis of this infant is
     a)     brainstem auditory evoked potentials
     b)     electroencephalography
     c)     fluorescent in situ hybridization analysis of chromosome 22
     d)     peripheral blood chromosome analysis
     e)     thyroid function testing
Question 56
Physical examination of a newborn female reveals meningomyelocele; dysmorphic features, including a narrow bifrontal diameter,
epicanthal folds, a broad and low nasal bridge, and midface hypoplasia; and a short systolic murmur. Results of echocardiography
document coarctation of the aortic arch.

Of the following, the MOST likely prenatal exposure to explain these findings is
     a)     alcohol
     b)     lithium
     c)     retinoic acid
     d)     thiazide diuretic
     e)     valproic acid


Question 24
You care for a newborn who has Down syndrome due to an unbalanced 14;21 translocation. At the request of the cytogenetics
laboratory director, you arranged for the parents' blood to be collected and karyotyped. You now are notified that the baby's
mother has an unusual karyotype with a balanced 14;21 translocation. You plan to refer her for genetic counseling.

Of the following, the recurrence risk for having a baby who has Down syndrome in a future pregnancy for this woman is CLOSEST
to
     a)     1% added to her age-related risk
b)    15%
     c)    30%
     d)    50%
     e)    100%


Question 152
You care for a 3-year-old girl who was born with spina bifida. The child is otherwise normally formed and is developmentally
appropriate with respect to her social, fine motor, and language skills. During a routine visit, her mother tells you that she is
contemplating another pregnancy. You mention the important role of folic acid in the prevention of neural tube defects, and you
recommend that she discuss this with her obstetrician.

Of the following, the recommendation, implemented before and during pregnancy, that should have the GREATEST impact on
reducing this woman's risk for having a future child affected with spina bifida is to
     a)     consume only grains and cereals that are folic acid-fortified
     b)     increase consumption of folic acid-rich leafy green vegetables
     c)     measure the woman 's serum folic acid level and supplement accordingly
     d)     prescribe oral folic acid 0.4 mg daily
     e)     prescribe oral folic acid 4 mg daily


Question 40
A mother who is new to your area brings her 6-year-old daughter to your office for evaluation due to poor school performance and
behavioral concerns. The child is in the first grade and is struggling with math and reading. The mother says that the girl is "hyper"
and does not play well with other children. Despite almost being hit by a car recently, she repeatedly runs into the road in front of
their house. On physical examination, you note that the child's height, weight, and head circumference are less than the 10th
percentile. She has short palpebral fissures, a smooth philtrum, and a thin upper lip (Item Q40A).




Of the following, the MOST likely diagnosis is
     a)     Down syndrome
     b)     fetal alcohol syndrome
     c)     hypochondroplasia
     d)     Russell-Silver syndrome
     e)     47,XXX


Question 58
You are called to the nursery to evaluate a term newborn who has dysmorphic features. The baby is
normally grown and vigorous. You note a small symmetrically receded mandible as well as posterior
positioning of the tongue and a cleft palate. The baby’s 22 year old mother was born with similar features;
she has no health problems at the present except for severe nearsightedness.
Without intervention, this infant is MOST at risk over the upcoming year for the development of
     a) Aortic root dilation
     b) Cor pulmonale
     c) Encephalopathy
     d) Hepatic fibrosis
     e)    Hydronephrosis
Question 136
A neighbor approaches you regarding her concerns about her newborn grandson. Her 23-year-old daughter, the mother of the
baby, had an uneventful pregnancy, labor, and delivery, and "all of her prenatal tests were normal. "The baby has been in the
normal newborn nursery for 3 days, and he is feeding poorly. He "just can't seem to get the hang of sucking." She thinks he is
probably just "lazy," and she describes him as feeling like a "rag doll" when she holds him. She has noticed that he has "a lot of
skin" at the back of his neck, and his fifth fingers are "crooked" (Item Q136A). She thinks his penis is small. You suggest that she
alert the baby's physician to her concerns.




Of the following, the MOST likely diagnosis is
     a)     22q11 deletion
     b)     Achondroplasia
     c)     cri-du-chat syndrome
     d)     Down syndrome
     e)     Prader-Willi syndrome
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  • 1. Board Review Week of September 28th Genetics and Dysmorphology Question 72 A 10-year-old boy (individual III,1 in the pedigree) (Item Q72A) presents for evaluation of ligamentous laxity and multiple joint dislocations. The family history is notable for a father who has scoliosis and ligamentous laxity, a paternal aunt who has had retinal detachments and mitral valve prolapse, and a paternal grandmother who had joint dislocations and now has osteoarthritis. Based on the family history, the MOST likely pattern of inheritance of this connective tissue disorder is a) autosomal dominant b) autosomal recessive c) mitochondrial d) X-linked dominant e) X-linked recessive Question 24 A female infant is born with unilateral cleft lip and palate. Findings on the remainder of the physical examination are normal, and you inform the parents that this apparently is an isolated birth defect. During counseling of the family about their risk for having another similarly affected child, the statement that you are MOST likely to include is that a) because the defect is isolated, their risk is no greater than that of any other couple b) cleft lip with/without cleft palate is a multifactorial trait that has a 4% risk of recurrence c) the recurrence risk can be estimated only after a chromosome analysis has been obtained d) the risk is increased for future females, but not males e) the risk is increased only if one of the parents had cleft lip with/without cleft palate Question 88 You are discussing the common indications for chromosome analysis with a group of third-year medical students. Of the following, the MOST appropriate statement to include in your discussion is that a) a blood karyotype should be obtained in any newborn who has multiple congenital anomalies and growth retardation b) a blood karyotype should be obtained only for a girl who has short stature if a buccal smear is negative c) chromosome analysis is not necessary to confirm the diagnosis of Down syndrome if the major clinical features are present d) chromosome analysis must be obtained to assess the reproductive risk for a woman who has a sibling who has trisomy 21 e) routine chromosome analysis is adequate for the diagnosis of microdeletion syndromes, such as DiGeorge syndrome Question 104 The pregnant mother of a 3-year-old girl in your practice is concerned because her obstetrician just told her that her serum alpha- fetoprotein value is markedly increased. Of the following, the MOST appropriate advice to give to this woman is that she should consider a) having an ultrasonographic examination to date her pregnancy and to search for fetal anomalies b) having another blood sample drawn to repeat the test c) having chorionic villus sampling as soon as possible to determine the chromosome complement of the fetus d) obtaining further testing only if she is older than age 35 e) being concerned only if there is a history of open neural tube defects in her family
  • 2. Question 152 A newborn female has loose neck skin (Item Q152A) and nonpitting edema of the lower extremities (Item Q152B). Of the following, the MOST appropriate evaluation for this infant is a) blood chromosome analysis b) magnetic resonance imaging of the brain c) slitlamp ophthalmologic examination d) ultrasonography of the liver e) voiding cystourethrography Question 136 A newborn has microcephaly, dysmorphic features (including a prominent forehead, protuberant ears, and micrognathia), bilateral hip dislocation, clinodactyly, and a single transverse palmar crease bilaterally. Peripheral blood chromosome analysis reveals an unbalanced translocation that results in partial trisomy 9. Of the following, the MOST appropriate statement to include when discussing the diagnosis with the parents of this infant is that a) chromosome analysis should be obtained on both parents to determine if they are balanced translocation carriers b) chromosome analysis of their other children is unnecessary c) mental development should be normal because their infant does not have a full trisomy d) their risk for a similarly affected child in future pregnancies is very small e) they are at increased risk for other trisomies (eg, Down syndrome) in future pregnancies Question 216 A newborn female has a cardiac murmur. Before the cardiologist arrives to evaluate her, she has a seizure. Results of laboratory testing include a serum calcium concentration of 5.0 mg/dL (1.25 mmol/L). Subsequently, echocardiography reveals an aortic arch anomaly. Of the following, the MOST appropriate test to obtain to aid in the diagnosis of this infant is a) brainstem auditory evoked potentials b) electroencephalography c) fluorescent in situ hybridization analysis of chromosome 22 d) peripheral blood chromosome analysis e) thyroid function testing Question 56 Physical examination of a newborn female reveals meningomyelocele; dysmorphic features, including a narrow bifrontal diameter, epicanthal folds, a broad and low nasal bridge, and midface hypoplasia; and a short systolic murmur. Results of echocardiography document coarctation of the aortic arch. Of the following, the MOST likely prenatal exposure to explain these findings is a) alcohol b) lithium c) retinoic acid d) thiazide diuretic e) valproic acid Question 24 You care for a newborn who has Down syndrome due to an unbalanced 14;21 translocation. At the request of the cytogenetics laboratory director, you arranged for the parents' blood to be collected and karyotyped. You now are notified that the baby's mother has an unusual karyotype with a balanced 14;21 translocation. You plan to refer her for genetic counseling. Of the following, the recurrence risk for having a baby who has Down syndrome in a future pregnancy for this woman is CLOSEST to a) 1% added to her age-related risk
  • 3. b) 15% c) 30% d) 50% e) 100% Question 152 You care for a 3-year-old girl who was born with spina bifida. The child is otherwise normally formed and is developmentally appropriate with respect to her social, fine motor, and language skills. During a routine visit, her mother tells you that she is contemplating another pregnancy. You mention the important role of folic acid in the prevention of neural tube defects, and you recommend that she discuss this with her obstetrician. Of the following, the recommendation, implemented before and during pregnancy, that should have the GREATEST impact on reducing this woman's risk for having a future child affected with spina bifida is to a) consume only grains and cereals that are folic acid-fortified b) increase consumption of folic acid-rich leafy green vegetables c) measure the woman 's serum folic acid level and supplement accordingly d) prescribe oral folic acid 0.4 mg daily e) prescribe oral folic acid 4 mg daily Question 40 A mother who is new to your area brings her 6-year-old daughter to your office for evaluation due to poor school performance and behavioral concerns. The child is in the first grade and is struggling with math and reading. The mother says that the girl is "hyper" and does not play well with other children. Despite almost being hit by a car recently, she repeatedly runs into the road in front of their house. On physical examination, you note that the child's height, weight, and head circumference are less than the 10th percentile. She has short palpebral fissures, a smooth philtrum, and a thin upper lip (Item Q40A). Of the following, the MOST likely diagnosis is a) Down syndrome b) fetal alcohol syndrome c) hypochondroplasia d) Russell-Silver syndrome e) 47,XXX Question 58 You are called to the nursery to evaluate a term newborn who has dysmorphic features. The baby is normally grown and vigorous. You note a small symmetrically receded mandible as well as posterior positioning of the tongue and a cleft palate. The baby’s 22 year old mother was born with similar features; she has no health problems at the present except for severe nearsightedness. Without intervention, this infant is MOST at risk over the upcoming year for the development of a) Aortic root dilation b) Cor pulmonale c) Encephalopathy d) Hepatic fibrosis e) Hydronephrosis
  • 4. Question 136 A neighbor approaches you regarding her concerns about her newborn grandson. Her 23-year-old daughter, the mother of the baby, had an uneventful pregnancy, labor, and delivery, and "all of her prenatal tests were normal. "The baby has been in the normal newborn nursery for 3 days, and he is feeding poorly. He "just can't seem to get the hang of sucking." She thinks he is probably just "lazy," and she describes him as feeling like a "rag doll" when she holds him. She has noticed that he has "a lot of skin" at the back of his neck, and his fifth fingers are "crooked" (Item Q136A). She thinks his penis is small. You suggest that she alert the baby's physician to her concerns. Of the following, the MOST likely diagnosis is a) 22q11 deletion b) Achondroplasia c) cri-du-chat syndrome d) Down syndrome e) Prader-Willi syndrome

Editor's Notes

  1. Firstly I’ll introduce peculiarities of SDM. They ‘re particularly interesting because the practice of geo-referencing them have caused a growing demand for powerful exploratory data analysis techniques overcomes classical statistical and data mining techniques and, among other things,support the analysis of socio economic phenomena by a spatial point of view. In this talk I’ll focus my attention on a specific task that is the discovery of spatial association rules For this purpose I’ll present ARES a system to extract association rules from census data and illustrate an application ARES to mine spatial association rules on North West England 1998 census data in order to study the mportality risk in Greater manchester county
  2. What is IE. As a task it is… Starting with some text… and a empty data base with a defined ontology of fields and records, Use the information in the text to fill the database.
  3. ML… although this is an area where ML has not yet trounced the hand-built systems. In some of the latest evaluations, hand-built shared 1 st place with a ML. Now many companies making a business from IE (from the Web): WasBang, Inxight, Intelliseek, ClearForest.
  4. Data sparseness, robustness
  5. CV i.e. it is divided into 5 folds (Four are used for training and one for testing in turn).
  6. Initial ILP reasearch deals with concept learning in form of predicate definition learning
  7. ATRE is a multiple-concept learning system, which solves the following problem:
  8. Since the generation of a clause depends on the chosen seed, several seeds have to be chosen such that at least one seed per incomplete predicate definition is kept . Therefore, the search space is actually a forest of as many search-trees as the number of chosen seeds. The parallel exploration of the forest related to odd and even numbers. Spec. hierarchies are traversed top-dow. Search proceeds towards deeper and deeper levels of the specialization hierarchies until at least a user-defined number of consistent clauses is found. A supervisor task decides whether the search should carry on or not on the basis of the results returned by the concurrent tasks. When the search is stopped, the supervisor selects the “best” consistent clause according to the user’s preference criterion. This strategy has the advantage that simpler consistent clauses are found first, independently of the predicates to be learned. First learning step Consistent clauses in red
  9. Second learning step
  10. CV i.e. it is divided into 5 folds (Four are used for training and one for testing in turn).
  11. If we guarantee the following two conditions: ……………………… then after a finite number of steps a theory T , which is complete and consistent, is built. If we denote by LHM( T i ) the least Herbrand model of a theory T i , the stepwise construction of theories entails that LHM( T i )  LHM( T i+1 ), for each i  {0, 1,  , n-1}, since the addition of a clause to a theory can only augment the LHM
  12. In order to guarantee the first of the two conditions it is possible to proceed as follows. First, a positive example e + of a predicate p to be learned is selected, such that e + is not in LHM( T i ). The example e + is called seed . Then the space of definite clauses more general than e + is explored, looking for a clause C, if any, such that neg(LHM( T i  { C })) =  . In this way we guarantee that the second condition above holds as well. When found, C is added to T i giving T i+1 . If some positive examples are not included in LHM( T i+1 ) then a new seed is selected and the process is repeated. The second condition is more difficult to guarantee because of the non-monotonicity property. The approach followed in ATRE to remove inconsistency due to the addition of a clause to the theory consists of simple syntactic changes in the theory, which eventually creates new layers . The layering of a theory introduces a first variation of the classical separate-and-conquer strategy sketched above, since the addition of a locally consistent clause generated in the conquer stage is preceded by a global consistency check.
  13. Learning multi-relational patterns from multi-relational data and background knowledge It allows to navigate the relational structure of data