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Thoughts about academic publishing
My history in publishing and editing
• Publishing (1983-present)
• > 170 peer-reviewed papers (incl. Science, Nature, PNAS)
• 65 reviews of books or software
• 34 book chapters, technical reports, popular articles
• 3 books ( + 3 under contract)
• 2 op-eds (Nature World View, Seattle Times)
• 1 science fiction story (Nature Futures)
• 1 creative-writing essay (in Forest Under Story)
• Editing (1994-present)
• Ecological Society of America
• Chair, Committee on future of electronic data (1994-1996)
• Founding editor, Ecological Archives (1997-2001)
• Associate editor-in-chief, Ecology (2002-2010)
• Editor-in-chief, Ecological Monographs (2009-2015)
• Botanical Society of America
• Associate editor (1995-2004)
• Other
• Ecology Letters (Associate Editor)
• Peer-reviewer for dozens of journals, book publishers, funding agencies
(average: 1 review/month)
Key considerations
1. A good story
2. Know your audience
3. Your own considerations
4. The publishing world (choosing a journal)
5. Writing
1. Submission
2. Review
3. Acceptance
4. Visibility
Key considerations
1. A good story
• Theory/idea
• Data
• Conclusions
• Summarized easily (press-release, Twitter/Weibo)
Key considerations
2. Know your audience
• Who do you want to read your paper?
• Where do they get their information from?
• How is that information packaged?
• Scientific paper
• General article
• Popular press
• On-line only
• Visualization
Key considerations
3. Your own considerations
• Ego and identity
• https://orcid.org/
• Traditional metrics (journal-based)
• Impact factor
• Immediacy
• Five-year impact factor
• Half-life
Key considerations
3. Your own considerations
• Ego and identity
• https://orcid.org/
• Traditional metrics (journal-based)
• Impact factor
• Immediacy
• Five-year impact factor
• Half-life
• Altmetrics (article-based)
• https://www.altmetrics.org
• http://www.harzing.com/resources/publish-or-perish
• https://impactstory.org
Key considerations
4. The publishing world (it’s an ecosystem!)
• Societies, self-publishing, and non-profits
• Commercial (for-profit) journals (Elsevier, Springer, Kluwer…)
• Commercial-society hybrids (ESA, ESC, Wiley-Ecology)
• Open access publishers
• Legitimate
• Predatory
(https://en.wikipedia.org/wiki/Predatory_open_access_publishing),
(https://scholarlyoa.com/2015/01/02/bealls-list-of-predatory-
publishers-2015/)
• Grey
• Preprints
• arXiv (http://arxiv.org), bioRxiv (http://www.bioarxiv.org), PeerJ
(https://peerj.com/preprints/?journal=peerj), DASH
(https://dash.harvard.edu)…
Key considerations
5. Writing
• Writing is a craft – work at it!
“You should write because you love the shape of stories and sentences and the
creation of different worlds on a page. Writing comes from reading, and
reading is the finest teacher of how to write.” (--Annie Proulx)
• Read good writing
• Work with friends, colleagues, translators, editors
• Rewrite, edit, polish; rewrite, edit, polish…
• Repeat…
• The Elements of Style (W. Strunk & E.B. White) is indispensable.
• Originality and citation
• Avoid duplicate publication
• Avoid plagiarism
• One example: https://www.plagiarismsoftware.net/
• Other examples of misconduct
• http://retractionwatch.com/
Submitting a manuscript
• Manuscript
• Work with professional editors and translators
• Use the active voice (reflects responsibility)
• Pay attention to guidelines and formatting instructions! (bibliographic
management software simplifies this task)
• Avoid “data not shown”. Make data and code available!
(http://datadryad.org, http://figshare.com, institutional repositories,
https://github.com …)
• Cover letter
• It matters, but more at some journals than others
• Often requires short summary, “tweets”, or highlights
• Suggested editors and reviewers
• Often required, rarely used (or useful)
Review process
• Different levels of review: rejection or acceptance
can occur at any level
• Editor-in-chief
• Editorial board / Handling editor
• Peer reviewers
• Almost everything gets rejected!
• Be emotionally prepared
• Move on quickly (revise, reformat, resubmit)
• Respond quickly to requests from journals
Acceptance
• Copy-edits (only some journals)
• Page proofs/galley proofs (48-hour response)
• Embargoes (who benefits?)
• Online (or online-before-print)
• Data and code available
• Press releases and outreach (#scicomm)
Maintain visibility
• Know your workplace expectations:
• Academia: Journals, book chapters, books… Publish or
perish  Publish or vanish
• Governmental agencies & NGOs: White papers, reports,
… Focus is on the mission; report on time. Clearance
often required for op-eds, public presentations, etc.
• Private sector: Deliverables. What does your boss want?
Be flexible and always ready to change, but be principled
• Consulting: The client is (almost) always right.
• Website? Social media? Watch out!

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Thoughts about academic publishing

  • 2. My history in publishing and editing • Publishing (1983-present) • > 170 peer-reviewed papers (incl. Science, Nature, PNAS) • 65 reviews of books or software • 34 book chapters, technical reports, popular articles • 3 books ( + 3 under contract) • 2 op-eds (Nature World View, Seattle Times) • 1 science fiction story (Nature Futures) • 1 creative-writing essay (in Forest Under Story) • Editing (1994-present) • Ecological Society of America • Chair, Committee on future of electronic data (1994-1996) • Founding editor, Ecological Archives (1997-2001) • Associate editor-in-chief, Ecology (2002-2010) • Editor-in-chief, Ecological Monographs (2009-2015) • Botanical Society of America • Associate editor (1995-2004) • Other • Ecology Letters (Associate Editor) • Peer-reviewer for dozens of journals, book publishers, funding agencies (average: 1 review/month)
  • 3. Key considerations 1. A good story 2. Know your audience 3. Your own considerations 4. The publishing world (choosing a journal) 5. Writing 1. Submission 2. Review 3. Acceptance 4. Visibility
  • 4. Key considerations 1. A good story • Theory/idea • Data • Conclusions • Summarized easily (press-release, Twitter/Weibo)
  • 5. Key considerations 2. Know your audience • Who do you want to read your paper? • Where do they get their information from? • How is that information packaged? • Scientific paper • General article • Popular press • On-line only • Visualization
  • 6. Key considerations 3. Your own considerations • Ego and identity • https://orcid.org/ • Traditional metrics (journal-based) • Impact factor • Immediacy • Five-year impact factor • Half-life
  • 7.
  • 8. Key considerations 3. Your own considerations • Ego and identity • https://orcid.org/ • Traditional metrics (journal-based) • Impact factor • Immediacy • Five-year impact factor • Half-life • Altmetrics (article-based) • https://www.altmetrics.org • http://www.harzing.com/resources/publish-or-perish • https://impactstory.org
  • 9. Key considerations 4. The publishing world (it’s an ecosystem!) • Societies, self-publishing, and non-profits • Commercial (for-profit) journals (Elsevier, Springer, Kluwer…) • Commercial-society hybrids (ESA, ESC, Wiley-Ecology) • Open access publishers • Legitimate • Predatory (https://en.wikipedia.org/wiki/Predatory_open_access_publishing), (https://scholarlyoa.com/2015/01/02/bealls-list-of-predatory- publishers-2015/) • Grey • Preprints • arXiv (http://arxiv.org), bioRxiv (http://www.bioarxiv.org), PeerJ (https://peerj.com/preprints/?journal=peerj), DASH (https://dash.harvard.edu)…
  • 10. Key considerations 5. Writing • Writing is a craft – work at it! “You should write because you love the shape of stories and sentences and the creation of different worlds on a page. Writing comes from reading, and reading is the finest teacher of how to write.” (--Annie Proulx) • Read good writing • Work with friends, colleagues, translators, editors • Rewrite, edit, polish; rewrite, edit, polish… • Repeat… • The Elements of Style (W. Strunk & E.B. White) is indispensable. • Originality and citation • Avoid duplicate publication • Avoid plagiarism • One example: https://www.plagiarismsoftware.net/ • Other examples of misconduct • http://retractionwatch.com/
  • 11. Submitting a manuscript • Manuscript • Work with professional editors and translators • Use the active voice (reflects responsibility) • Pay attention to guidelines and formatting instructions! (bibliographic management software simplifies this task) • Avoid “data not shown”. Make data and code available! (http://datadryad.org, http://figshare.com, institutional repositories, https://github.com …) • Cover letter • It matters, but more at some journals than others • Often requires short summary, “tweets”, or highlights • Suggested editors and reviewers • Often required, rarely used (or useful)
  • 12. Review process • Different levels of review: rejection or acceptance can occur at any level • Editor-in-chief • Editorial board / Handling editor • Peer reviewers • Almost everything gets rejected! • Be emotionally prepared • Move on quickly (revise, reformat, resubmit) • Respond quickly to requests from journals
  • 13. Acceptance • Copy-edits (only some journals) • Page proofs/galley proofs (48-hour response) • Embargoes (who benefits?) • Online (or online-before-print) • Data and code available • Press releases and outreach (#scicomm)
  • 14. Maintain visibility • Know your workplace expectations: • Academia: Journals, book chapters, books… Publish or perish  Publish or vanish • Governmental agencies & NGOs: White papers, reports, … Focus is on the mission; report on time. Clearance often required for op-eds, public presentations, etc. • Private sector: Deliverables. What does your boss want? Be flexible and always ready to change, but be principled • Consulting: The client is (almost) always right. • Website? Social media? Watch out!