SlideShare ist ein Scribd-Unternehmen logo
1 von 25
Downloaden Sie, um offline zu lesen
Tanz CRND Toronto
T. Murakami
A. Myashita
Y. Wakutani
G. Schmitt-Ulms
M. Zhen
F. Chen
P. Fraser
P. St George-Hyslop
Columbia
N. Shnieder
Cambridge
S. Qamar
R. Dodd
A. Costa
C. Holt
Q. Lin
M. Vendruscolo
G. Kaminski
C. Kaminski
E. Rees
Y. Li
G. Tartaglia
The Wellcome Trust
National Institutes of Health Research
Canadian Institutes of Health Research
Medical Research Council
Alzheimer Society of Ontario
Functional Genomics: A new type of protein
folding disorder causing neurodegeneration
In 2011, we decided to revaluate the
role of protein aggregates using a
transgenic worm (C. elegans) model…
ALS/FTD mutant FUS, but not WT FUS causes intracytoplasmic
accumulation of FUS assemblies that biochemically and morphologically
resemble those in human ALS/FTD neurons
Conventional
amyloids not
soluble in
2%SDS and
8M Urea
WT-FUS FUS501
C. Elegans model replicates key features of human
FUSopathy.. Toxicity is driven by LC domain
• WT FUS model:
– FUS located in nucleus (physiological);
– No 8M urea soluble assemblies;
– No neurotoxicity.
• Mutant FUS model:
– Nuclear and cytoplasmic assemblies;
– 8M Urea soluble assemblies correlate with toxicity.
– Assemblies closely resemble those in human FUS_ALS/FTD
tissues.
• LC domain is necessary & sufficient for toxicity
What is it about the Low Complexity (LC)
domains of FUS that makes them
“neurotoxic"?
FUS-LC domain drives assembly of FUS into
cytoplasmic liquid droplets in cells…
FUS-LC domain drives assembly of FUS into
liquid droplets in recombinant protein preps
.
0.5 μM FUS 100mM NaCL
.. and form visible gels that cycle
(4ºC Jelly - 23ºC Liquid)
Warmed to 23ºC
Cooled to 4ºC
1mM FUS 300mM NaCL
What impact do FUS mutations have on
liquid droplet and reversible hydrogel formation?
• We devised two assays to look at the
formation and stability of liquid droplets and
of reversible gels;
• What we found is that:
– ALS/FTD mutations cause phase transition
from liquid droplet / reversible hydrogels into
irreversible fibrous hydrogels
Full-length FUS FUS-LC domains
FUS(WT)
FUS(R522G)
FUS(P525L)
FUS501
FUS(R495X)
FUS(R524S)
Time = 0 min
FUS-LC(WT)
Time = 0 min
FUS-LC(G156E)
Time = 50 min Time = 50 min
FUS-LC(S96del)
Time = 50 min
ALS/FTD mutations cause phase transition from
liquid droplet into stable hydrogels
Wild type mutant mutant
0
20
40
60
80
100
120
140
Proportionofdroplets
remainingatt=50min
**
# # #
To explore the effects of ALS/FTD mutations
on these phase transitions, we exploited
the 4º Jelly - 23º liquid cycling assay
23ºC
4ºC
WT and benign polymorphic FUS-LC cycle well..
ALS/FTD mutants cycle poorly and form stable “irreversible” hydrogels
Wild type FUS
Benign polymorphism
ALS/FTD Mutant FUS
Droplet reversible gel irreversible gel
numberofcycles
beforeirreversibility
0
1
2
3
4
5
6
*
N.S.
23°C 4°C 23°C
60
50
R Urea R Urea
M.W.
(kDa)
Western blot
FUS
Human spinal cord
i ii
iii iv
v vi
vii viii
Recombinant FUS protein gels
Recombinant irreversible FUS gels have same solubility and structure
as mutant FUS assemblies from human ALS/FTD CNS tissue
FUS liquid droplet and reversible gels have low viscosities
(< 3 kPa.s) like P-granules.
Mutant irreversible assemblies high viscosities (> 10 kPa.S)
Wild type FUS
ALS/FTD Mutant FUS
N.S.
**
Liquid Reversible Irreversible
gel gel
0
5
10
15
20
25
30
***
viscosity(kPas)
FUS(LC)-WT
FUS(LC)-S96del
FUS(LC)-G156E
FUS(LC)-WT
FUS(LC)-S96del
FUS(LC)-G156E
FUS(LC)-WT
FUS(LC)-S96del
FUS(LC)-G156E
20nm bead tracking
Liquid Gel
• Does the liquid droplet / reversible gel transition
have a physiologic function?
– Does it allow regulated capture, transport and
release of RNP granule cargo (other
ribonucleoproteins (RNPs), RNAs etc?
• Does irreversible gel affect this function?
0
200
400
600
800
GFP-SMNrelease
**
Gel/Liquid G L G L G L G G’ G G’
GFP-SMN
N.S.
GFP-STAU1
0
200
400
600
800
GFP-STAU1release N.S.
**
***
Gel/Liquid G L G L G L G G’ G G’
Wild type FUS gels capture ribonucleoproteins (SMN, STAU),
but release the cargo when the FUS gel reverts to liquid.
But ALS/FTD mutant FUS gels retain SMN and STAU1 cargo
Reversible gel
(wild type)
Liquid
(wild type)
Irreversible gel
(ALS mutant)
Release
4ºC 23ºC 4ºC 23ºC
FUS-LC (WT) FUS-LC (Mutant)
No release
FUS(WT)
FUS(G156E)
FUS(S96del)
GELLED
REVERTED TO LIQUID (WT) ;
IRREVERSIBLE GEL (MUTANTS)LIQUID
0
1.3 µm
4
SMN Stau1 SMN Stau1 SMN Stau1
Diffusion
coefficient
µm2/s
Imaging of single RNP cargo molecules (SMN, STAU) show
free motion of cargo when wild type gels revert to liquid,
but retention of cargo by irreversible mutant FUS gels
Reversible
FUS(WT)
Irreversible
FUS(G156E)
• What effect would sequestration of RNP cargo
have on neuronal function?
• RNP granules are known to be important for local
control of RNA metabolism and new protein
synthesis…
• Could irreversible fibrillar hydrogel formation
sequester RNP granule cargo and……
block new protein synthesis in axon terminals?
Non-injected
FUS(WT)
FUS(P525L)
10 μm
FUS501
anti-
puromycin
antibody
Phase
Contrast
0.8
1.0
Newproteinsynthesis
1.2
0.6
0.4
0.2
0
N.S.
1.4
1.6
***
**
***
Non-injected
Wild type FUS
LC domain
ALS/FTD Mutant FUS
ALS/FTD mutant FUS and FUS-LC domain reduce new
protein synthesis in cultured Xenopus neurons
Inhibition of local
protein synthesis
dispersed monomer
liquid droplet
FUS mutation
local protein
synthesis
regulation of
local RNA
metabolism
and translation
reversible hydrogel
Irreversible fibrous hydrogel
Similar effects on
nuclear RNA
transcription,
splicing?
TAKE HOME POINTS
1. Assembly of mutant RNA binding proteins into pathological
intraneuronal deposits is functionally important in ALS/FTD
caused by mutations in FUS (and other related RNA-binding
proteins: TDP43);
2. Assembly is driven by low complexity (LC) domain, which
physiologically drive formation of liquid protein droplets and
reversible hydrogels…
3. Mutant hydrogels become irreversible if gelled too often or too
long..
4. These irreversible hydrogels represent a novel type of
neurotoxic misfolded protein that are different from convential
amyloids.
5. These irreversible hydrogels cause neurotoxicity by disturbing
RNP granule function, and inhibiting RNA metabolism and protein
translation.
Tanz CRND Toronto
T. Murakami
A. Myashita
Y. Wakutani
G. Schmitt-Ulms
M. Zhen
F. Chen
P. Fraser
P. St George-Hyslop
Columbia
N. Shnieder
Cambridge
S. Qamar
R. Dodd
A. Costa
C. Holt
Q. Lin
M. Vendruscolo
G. Kaminski
C. Kaminski
E. Rees
Y. Li
G. Tartaglia
Acknowledgements
The Wellcome Trust
National Institutes of Health Research
Canadian Institutes of Health Research
Medical Research Council
Alzheimer Society of Ontario
0.8
1.0
NewProteinsynthesis
1.2
0.4
0.6
N.S.
***
**
0
0.2
1.4
1.6
Thapsigargin - - + + - - - -
PERKi - + - + - + - +
N.S. N.S.
The reduced protein synthesis is not to due activation of unfolded
protein response (UPR) because PERK inhibition (neurons) or
PERK RNAi knock down (C elegans) does not rescue mutant-FUS
inhibition of protein synthesis
Control
Thapsigargin
PERKi
The reduced protein synthesis is not to due activation of unfolded
protein response (UPR) because stress granules are not increased
in vivo in mutant FUS animals compared to wild type animals
8
numberofpab-1positivegranules(/neuron)
4
6
N.S.
N.S.
0
2
basal condition heat shock
10

Weitere ähnliche Inhalte

Was ist angesagt?

Gene expression and regulation
Gene expression and regulationGene expression and regulation
Gene expression and regulation
Tapeshwar Yadav
 
PhD Federica III anno
PhD Federica III annoPhD Federica III anno
PhD Federica III anno
lab13unisa
 
types and structure of prokaryotic RNA
types and structure of prokaryotic RNAtypes and structure of prokaryotic RNA
types and structure of prokaryotic RNA
Tooba Kanwal
 

Was ist angesagt? (20)

Molecular chaperones
Molecular chaperonesMolecular chaperones
Molecular chaperones
 
Ubiquitin & Proteasome: Role in Transcription Regulation
Ubiquitin & Proteasome: Role in Transcription RegulationUbiquitin & Proteasome: Role in Transcription Regulation
Ubiquitin & Proteasome: Role in Transcription Regulation
 
Dna Mutations
Dna MutationsDna Mutations
Dna Mutations
 
SIGNALING PATHWAY FROM THE MEMBRANE TO NUCLEUS
SIGNALING PATHWAY FROM THE MEMBRANE TO NUCLEUSSIGNALING PATHWAY FROM THE MEMBRANE TO NUCLEUS
SIGNALING PATHWAY FROM THE MEMBRANE TO NUCLEUS
 
mutation ppt
 mutation ppt mutation ppt
mutation ppt
 
Structure of rna and its activation
Structure of rna and its activationStructure of rna and its activation
Structure of rna and its activation
 
Ribozymes
RibozymesRibozymes
Ribozymes
 
Mapk modified
Mapk modifiedMapk modified
Mapk modified
 
Gene mutation and Regulation of Gene expression
Gene mutation and Regulation of Gene expressionGene mutation and Regulation of Gene expression
Gene mutation and Regulation of Gene expression
 
Gene expression and regulation
Gene expression and regulationGene expression and regulation
Gene expression and regulation
 
Epigenetic regulation ataee
Epigenetic regulation ataeeEpigenetic regulation ataee
Epigenetic regulation ataee
 
Functionasites of ribosomes By KK Sahu Sir
Functionasites of ribosomes By KK Sahu SirFunctionasites of ribosomes By KK Sahu Sir
Functionasites of ribosomes By KK Sahu Sir
 
Ribozyme
RibozymeRibozyme
Ribozyme
 
Types of RNA
Types of RNATypes of RNA
Types of RNA
 
Ribozymes
RibozymesRibozymes
Ribozymes
 
PhD Federica III anno
PhD Federica III annoPhD Federica III anno
PhD Federica III anno
 
types and structure of prokaryotic RNA
types and structure of prokaryotic RNAtypes and structure of prokaryotic RNA
types and structure of prokaryotic RNA
 
initiation of meiotic recombination conservation and specificities among euka...
initiation of meiotic recombination conservation and specificities among euka...initiation of meiotic recombination conservation and specificities among euka...
initiation of meiotic recombination conservation and specificities among euka...
 
Signalling through ubiquitin ligase
Signalling through ubiquitin ligaseSignalling through ubiquitin ligase
Signalling through ubiquitin ligase
 
Detection of autophagy
Detection of autophagyDetection of autophagy
Detection of autophagy
 

Ähnlich wie Functional Genomics

Dimethyl sulfoxide activates tumorn ecrosisfactor p53 mediated apoptosi and
Dimethyl sulfoxide activates tumorn ecrosisfactor p53 mediated apoptosi andDimethyl sulfoxide activates tumorn ecrosisfactor p53 mediated apoptosi and
Dimethyl sulfoxide activates tumorn ecrosisfactor p53 mediated apoptosi and
rkkoiri
 
Dimethyl sulfoxide activates tumorn ecrosisfactor p53 mediated apoptosi and
Dimethyl sulfoxide activates tumorn ecrosisfactor p53 mediated apoptosi andDimethyl sulfoxide activates tumorn ecrosisfactor p53 mediated apoptosi and
Dimethyl sulfoxide activates tumorn ecrosisfactor p53 mediated apoptosi and
rkkoiri
 
Physiological And Pathological Systems Within The...
Physiological And Pathological Systems Within The...Physiological And Pathological Systems Within The...
Physiological And Pathological Systems Within The...
Deb Birch
 
Molecular basis of mutation by kss
Molecular basis of mutation by  kssMolecular basis of mutation by  kss
Molecular basis of mutation by kss
kishorssawaikar
 
Molecular basis of mutation by kss
Molecular basis of mutation by  kssMolecular basis of mutation by  kss
Molecular basis of mutation by kss
kishorssawaikar
 
Molecular basis of mutation by kss
Molecular basis of mutation by  kssMolecular basis of mutation by  kss
Molecular basis of mutation by kss
kishorssawaikar
 
journal.pgen.1003895.PDF
journal.pgen.1003895.PDFjournal.pgen.1003895.PDF
journal.pgen.1003895.PDF
Yueqin Zhou
 

Ähnlich wie Functional Genomics (20)

Sulphate Conjugation & EMT pathways in cancer
Sulphate Conjugation & EMT pathways in cancerSulphate Conjugation & EMT pathways in cancer
Sulphate Conjugation & EMT pathways in cancer
 
Ferroptosis mechanisms and links with diseases.pdf
Ferroptosis mechanisms and links with diseases.pdfFerroptosis mechanisms and links with diseases.pdf
Ferroptosis mechanisms and links with diseases.pdf
 
Dimethyl sulfoxide activates tumorn ecrosisfactor p53 mediated apoptosi and
Dimethyl sulfoxide activates tumorn ecrosisfactor p53 mediated apoptosi andDimethyl sulfoxide activates tumorn ecrosisfactor p53 mediated apoptosi and
Dimethyl sulfoxide activates tumorn ecrosisfactor p53 mediated apoptosi and
 
Dimethyl sulfoxide activates tumorn ecrosisfactor p53 mediated apoptosi and
Dimethyl sulfoxide activates tumorn ecrosisfactor p53 mediated apoptosi andDimethyl sulfoxide activates tumorn ecrosisfactor p53 mediated apoptosi and
Dimethyl sulfoxide activates tumorn ecrosisfactor p53 mediated apoptosi and
 
Clase 5_Biomembranas y Bioseñalización (1).pdf
Clase 5_Biomembranas y Bioseñalización (1).pdfClase 5_Biomembranas y Bioseñalización (1).pdf
Clase 5_Biomembranas y Bioseñalización (1).pdf
 
Cell Membrane Essay
Cell Membrane EssayCell Membrane Essay
Cell Membrane Essay
 
Physiological And Pathological Systems Within The...
Physiological And Pathological Systems Within The...Physiological And Pathological Systems Within The...
Physiological And Pathological Systems Within The...
 
rdis-2-e29515
rdis-2-e29515rdis-2-e29515
rdis-2-e29515
 
Poster
PosterPoster
Poster
 
Molecular basis of mutation by kss
Molecular basis of mutation by  kssMolecular basis of mutation by  kss
Molecular basis of mutation by kss
 
Molecular basis of mutation by kss
Molecular basis of mutation by  kssMolecular basis of mutation by  kss
Molecular basis of mutation by kss
 
Molecular basis of mutation by kss
Molecular basis of mutation by  kssMolecular basis of mutation by  kss
Molecular basis of mutation by kss
 
Lipid Droplets
Lipid DropletsLipid Droplets
Lipid Droplets
 
final disso
final dissofinal disso
final disso
 
Lipid Rafts: bringing order to chaos
Lipid Rafts: bringing order to chaosLipid Rafts: bringing order to chaos
Lipid Rafts: bringing order to chaos
 
molecular-basis-of-mutation.pdf
molecular-basis-of-mutation.pdfmolecular-basis-of-mutation.pdf
molecular-basis-of-mutation.pdf
 
journal.pgen.1003895.PDF
journal.pgen.1003895.PDFjournal.pgen.1003895.PDF
journal.pgen.1003895.PDF
 
Amyotrophic lateral sclerosis &amp; frontotemporal lobar degeneration summary...
Amyotrophic lateral sclerosis &amp; frontotemporal lobar degeneration summary...Amyotrophic lateral sclerosis &amp; frontotemporal lobar degeneration summary...
Amyotrophic lateral sclerosis &amp; frontotemporal lobar degeneration summary...
 
Molecular Cell Biology the endoplasmic reticulum
Molecular Cell Biology  the endoplasmic reticulumMolecular Cell Biology  the endoplasmic reticulum
Molecular Cell Biology the endoplasmic reticulum
 
Sandlund
SandlundSandlund
Sandlund
 

Mehr von Alzforum

Mehr von Alzforum (20)

First Identification of Role TMEM106B in FTD
First Identification of Role TMEM106B in FTDFirst Identification of Role TMEM106B in FTD
First Identification of Role TMEM106B in FTD
 
Protein-RNA Complexes, ALS and Aging
Protein-RNA Complexes, ALS and AgingProtein-RNA Complexes, ALS and Aging
Protein-RNA Complexes, ALS and Aging
 
Lifespan vs. Healthspan
Lifespan vs. HealthspanLifespan vs. Healthspan
Lifespan vs. Healthspan
 
Genetic regulation of human brain aging
Genetic regulation of human brain agingGenetic regulation of human brain aging
Genetic regulation of human brain aging
 
Marc Dhenain Alzforum Webinar - Dec 7, 2016
Marc Dhenain Alzforum Webinar - Dec 7, 2016Marc Dhenain Alzforum Webinar - Dec 7, 2016
Marc Dhenain Alzforum Webinar - Dec 7, 2016
 
Peter Nelson Alzforum Webinar - Dec 7, 2016
Peter Nelson Alzforum Webinar - Dec 7, 2016Peter Nelson Alzforum Webinar - Dec 7, 2016
Peter Nelson Alzforum Webinar - Dec 7, 2016
 
Elizabeth Head Alzforum Webinar - Dec 7, 2016
Elizabeth Head Alzforum Webinar - Dec 7, 2016Elizabeth Head Alzforum Webinar - Dec 7, 2016
Elizabeth Head Alzforum Webinar - Dec 7, 2016
 
Patrick Hof Alzforum Webinar - Dec 7, 2016
Patrick Hof Alzforum Webinar - Dec 7, 2016Patrick Hof Alzforum Webinar - Dec 7, 2016
Patrick Hof Alzforum Webinar - Dec 7, 2016
 
Lary Walker Introduction Webinar
Lary Walker Introduction WebinarLary Walker Introduction Webinar
Lary Walker Introduction Webinar
 
Bob Olsson - Alzforum Live Webinar April 29, 2016
Bob Olsson - Alzforum Live Webinar April 29, 2016Bob Olsson - Alzforum Live Webinar April 29, 2016
Bob Olsson - Alzforum Live Webinar April 29, 2016
 
Henrik Zetterberg - Alzforum webinar April 29, 2016
Henrik Zetterberg - Alzforum webinar April 29, 2016Henrik Zetterberg - Alzforum webinar April 29, 2016
Henrik Zetterberg - Alzforum webinar April 29, 2016
 
Johannes Streffer - Alzforum webinar April 29, 2016
Johannes Streffer - Alzforum webinar April 29, 2016Johannes Streffer - Alzforum webinar April 29, 2016
Johannes Streffer - Alzforum webinar April 29, 2016
 
Byron Caughey
Byron CaugheyByron Caughey
Byron Caughey
 
Dominic Walsh - A Critical Appraisal of the Pathogenic Protein Spread Hypothe...
Dominic Walsh - A Critical Appraisal of the Pathogenic Protein Spread Hypothe...Dominic Walsh - A Critical Appraisal of the Pathogenic Protein Spread Hypothe...
Dominic Walsh - A Critical Appraisal of the Pathogenic Protein Spread Hypothe...
 
David Harris -
David Harris - David Harris -
David Harris -
 
Patrik Brundin - Are Synucleinopathies Prion Diseases?
Patrik Brundin - Are Synucleinopathies Prion Diseases?Patrik Brundin - Are Synucleinopathies Prion Diseases?
Patrik Brundin - Are Synucleinopathies Prion Diseases?
 
Virginia Lee - Cell-to-Cell Spread of Pathological Tau
Virginia Lee - Cell-to-Cell Spread of Pathological TauVirginia Lee - Cell-to-Cell Spread of Pathological Tau
Virginia Lee - Cell-to-Cell Spread of Pathological Tau
 
The cellular phase of Alzheimer's disease
The cellular phase of Alzheimer's diseaseThe cellular phase of Alzheimer's disease
The cellular phase of Alzheimer's disease
 
Hendrix 2015 composite endpoints redacted
Hendrix 2015 composite endpoints redacted Hendrix 2015 composite endpoints redacted
Hendrix 2015 composite endpoints redacted
 
Cliff Brangwynne
Cliff BrangwynneCliff Brangwynne
Cliff Brangwynne
 

Kürzlich hochgeladen

CALL ON ➥8923113531 🔝Call Girls Kesar Bagh Lucknow best Night Fun service 🪡
CALL ON ➥8923113531 🔝Call Girls Kesar Bagh Lucknow best Night Fun service  🪡CALL ON ➥8923113531 🔝Call Girls Kesar Bagh Lucknow best Night Fun service  🪡
CALL ON ➥8923113531 🔝Call Girls Kesar Bagh Lucknow best Night Fun service 🪡
anilsa9823
 
Presentation Vikram Lander by Vedansh Gupta.pptx
Presentation Vikram Lander by Vedansh Gupta.pptxPresentation Vikram Lander by Vedansh Gupta.pptx
Presentation Vikram Lander by Vedansh Gupta.pptx
gindu3009
 
Pests of mustard_Identification_Management_Dr.UPR.pdf
Pests of mustard_Identification_Management_Dr.UPR.pdfPests of mustard_Identification_Management_Dr.UPR.pdf
Pests of mustard_Identification_Management_Dr.UPR.pdf
PirithiRaju
 
Discovery of an Accretion Streamer and a Slow Wide-angle Outflow around FUOri...
Discovery of an Accretion Streamer and a Slow Wide-angle Outflow around FUOri...Discovery of an Accretion Streamer and a Slow Wide-angle Outflow around FUOri...
Discovery of an Accretion Streamer and a Slow Wide-angle Outflow around FUOri...
Sérgio Sacani
 

Kürzlich hochgeladen (20)

VIRUSES structure and classification ppt by Dr.Prince C P
VIRUSES structure and classification ppt by Dr.Prince C PVIRUSES structure and classification ppt by Dr.Prince C P
VIRUSES structure and classification ppt by Dr.Prince C P
 
Botany 4th semester series (krishna).pdf
Botany 4th semester series (krishna).pdfBotany 4th semester series (krishna).pdf
Botany 4th semester series (krishna).pdf
 
Isotopic evidence of long-lived volcanism on Io
Isotopic evidence of long-lived volcanism on IoIsotopic evidence of long-lived volcanism on Io
Isotopic evidence of long-lived volcanism on Io
 
Hire 💕 9907093804 Hooghly Call Girls Service Call Girls Agency
Hire 💕 9907093804 Hooghly Call Girls Service Call Girls AgencyHire 💕 9907093804 Hooghly Call Girls Service Call Girls Agency
Hire 💕 9907093804 Hooghly Call Girls Service Call Girls Agency
 
Animal Communication- Auditory and Visual.pptx
Animal Communication- Auditory and Visual.pptxAnimal Communication- Auditory and Visual.pptx
Animal Communication- Auditory and Visual.pptx
 
All-domain Anomaly Resolution Office U.S. Department of Defense (U) Case: “Eg...
All-domain Anomaly Resolution Office U.S. Department of Defense (U) Case: “Eg...All-domain Anomaly Resolution Office U.S. Department of Defense (U) Case: “Eg...
All-domain Anomaly Resolution Office U.S. Department of Defense (U) Case: “Eg...
 
CALL ON ➥8923113531 🔝Call Girls Kesar Bagh Lucknow best Night Fun service 🪡
CALL ON ➥8923113531 🔝Call Girls Kesar Bagh Lucknow best Night Fun service  🪡CALL ON ➥8923113531 🔝Call Girls Kesar Bagh Lucknow best Night Fun service  🪡
CALL ON ➥8923113531 🔝Call Girls Kesar Bagh Lucknow best Night Fun service 🪡
 
Pulmonary drug delivery system M.pharm -2nd sem P'ceutics
Pulmonary drug delivery system M.pharm -2nd sem P'ceuticsPulmonary drug delivery system M.pharm -2nd sem P'ceutics
Pulmonary drug delivery system M.pharm -2nd sem P'ceutics
 
Stunning ➥8448380779▻ Call Girls In Panchshil Enclave Delhi NCR
Stunning ➥8448380779▻ Call Girls In Panchshil Enclave Delhi NCRStunning ➥8448380779▻ Call Girls In Panchshil Enclave Delhi NCR
Stunning ➥8448380779▻ Call Girls In Panchshil Enclave Delhi NCR
 
Green chemistry and Sustainable development.pptx
Green chemistry  and Sustainable development.pptxGreen chemistry  and Sustainable development.pptx
Green chemistry and Sustainable development.pptx
 
Presentation Vikram Lander by Vedansh Gupta.pptx
Presentation Vikram Lander by Vedansh Gupta.pptxPresentation Vikram Lander by Vedansh Gupta.pptx
Presentation Vikram Lander by Vedansh Gupta.pptx
 
Pests of mustard_Identification_Management_Dr.UPR.pdf
Pests of mustard_Identification_Management_Dr.UPR.pdfPests of mustard_Identification_Management_Dr.UPR.pdf
Pests of mustard_Identification_Management_Dr.UPR.pdf
 
Chemistry 4th semester series (krishna).pdf
Chemistry 4th semester series (krishna).pdfChemistry 4th semester series (krishna).pdf
Chemistry 4th semester series (krishna).pdf
 
9654467111 Call Girls In Raj Nagar Delhi Short 1500 Night 6000
9654467111 Call Girls In Raj Nagar Delhi Short 1500 Night 60009654467111 Call Girls In Raj Nagar Delhi Short 1500 Night 6000
9654467111 Call Girls In Raj Nagar Delhi Short 1500 Night 6000
 
Recombinant DNA technology (Immunological screening)
Recombinant DNA technology (Immunological screening)Recombinant DNA technology (Immunological screening)
Recombinant DNA technology (Immunological screening)
 
Biological Classification BioHack (3).pdf
Biological Classification BioHack (3).pdfBiological Classification BioHack (3).pdf
Biological Classification BioHack (3).pdf
 
Discovery of an Accretion Streamer and a Slow Wide-angle Outflow around FUOri...
Discovery of an Accretion Streamer and a Slow Wide-angle Outflow around FUOri...Discovery of an Accretion Streamer and a Slow Wide-angle Outflow around FUOri...
Discovery of an Accretion Streamer and a Slow Wide-angle Outflow around FUOri...
 
GBSN - Microbiology (Unit 1)
GBSN - Microbiology (Unit 1)GBSN - Microbiology (Unit 1)
GBSN - Microbiology (Unit 1)
 
TEST BANK For Radiologic Science for Technologists, 12th Edition by Stewart C...
TEST BANK For Radiologic Science for Technologists, 12th Edition by Stewart C...TEST BANK For Radiologic Science for Technologists, 12th Edition by Stewart C...
TEST BANK For Radiologic Science for Technologists, 12th Edition by Stewart C...
 
fundamental of entomology all in one topics of entomology
fundamental of entomology all in one topics of entomologyfundamental of entomology all in one topics of entomology
fundamental of entomology all in one topics of entomology
 

Functional Genomics

  • 1. Tanz CRND Toronto T. Murakami A. Myashita Y. Wakutani G. Schmitt-Ulms M. Zhen F. Chen P. Fraser P. St George-Hyslop Columbia N. Shnieder Cambridge S. Qamar R. Dodd A. Costa C. Holt Q. Lin M. Vendruscolo G. Kaminski C. Kaminski E. Rees Y. Li G. Tartaglia The Wellcome Trust National Institutes of Health Research Canadian Institutes of Health Research Medical Research Council Alzheimer Society of Ontario Functional Genomics: A new type of protein folding disorder causing neurodegeneration
  • 2. In 2011, we decided to revaluate the role of protein aggregates using a transgenic worm (C. elegans) model…
  • 3. ALS/FTD mutant FUS, but not WT FUS causes intracytoplasmic accumulation of FUS assemblies that biochemically and morphologically resemble those in human ALS/FTD neurons Conventional amyloids not soluble in 2%SDS and 8M Urea WT-FUS FUS501
  • 4. C. Elegans model replicates key features of human FUSopathy.. Toxicity is driven by LC domain • WT FUS model: – FUS located in nucleus (physiological); – No 8M urea soluble assemblies; – No neurotoxicity. • Mutant FUS model: – Nuclear and cytoplasmic assemblies; – 8M Urea soluble assemblies correlate with toxicity. – Assemblies closely resemble those in human FUS_ALS/FTD tissues. • LC domain is necessary & sufficient for toxicity
  • 5. What is it about the Low Complexity (LC) domains of FUS that makes them “neurotoxic"?
  • 6. FUS-LC domain drives assembly of FUS into cytoplasmic liquid droplets in cells…
  • 7. FUS-LC domain drives assembly of FUS into liquid droplets in recombinant protein preps . 0.5 μM FUS 100mM NaCL
  • 8. .. and form visible gels that cycle (4ºC Jelly - 23ºC Liquid) Warmed to 23ºC Cooled to 4ºC 1mM FUS 300mM NaCL
  • 9. What impact do FUS mutations have on liquid droplet and reversible hydrogel formation? • We devised two assays to look at the formation and stability of liquid droplets and of reversible gels; • What we found is that: – ALS/FTD mutations cause phase transition from liquid droplet / reversible hydrogels into irreversible fibrous hydrogels
  • 10. Full-length FUS FUS-LC domains FUS(WT) FUS(R522G) FUS(P525L) FUS501 FUS(R495X) FUS(R524S) Time = 0 min FUS-LC(WT) Time = 0 min FUS-LC(G156E) Time = 50 min Time = 50 min FUS-LC(S96del) Time = 50 min ALS/FTD mutations cause phase transition from liquid droplet into stable hydrogels Wild type mutant mutant 0 20 40 60 80 100 120 140 Proportionofdroplets remainingatt=50min ** # # #
  • 11. To explore the effects of ALS/FTD mutations on these phase transitions, we exploited the 4º Jelly - 23º liquid cycling assay 23ºC 4ºC
  • 12. WT and benign polymorphic FUS-LC cycle well.. ALS/FTD mutants cycle poorly and form stable “irreversible” hydrogels Wild type FUS Benign polymorphism ALS/FTD Mutant FUS Droplet reversible gel irreversible gel numberofcycles beforeirreversibility 0 1 2 3 4 5 6 * N.S. 23°C 4°C 23°C
  • 13. 60 50 R Urea R Urea M.W. (kDa) Western blot FUS Human spinal cord i ii iii iv v vi vii viii Recombinant FUS protein gels Recombinant irreversible FUS gels have same solubility and structure as mutant FUS assemblies from human ALS/FTD CNS tissue
  • 14. FUS liquid droplet and reversible gels have low viscosities (< 3 kPa.s) like P-granules. Mutant irreversible assemblies high viscosities (> 10 kPa.S) Wild type FUS ALS/FTD Mutant FUS N.S. ** Liquid Reversible Irreversible gel gel 0 5 10 15 20 25 30 *** viscosity(kPas) FUS(LC)-WT FUS(LC)-S96del FUS(LC)-G156E FUS(LC)-WT FUS(LC)-S96del FUS(LC)-G156E FUS(LC)-WT FUS(LC)-S96del FUS(LC)-G156E 20nm bead tracking Liquid Gel
  • 15. • Does the liquid droplet / reversible gel transition have a physiologic function? – Does it allow regulated capture, transport and release of RNP granule cargo (other ribonucleoproteins (RNPs), RNAs etc? • Does irreversible gel affect this function?
  • 16. 0 200 400 600 800 GFP-SMNrelease ** Gel/Liquid G L G L G L G G’ G G’ GFP-SMN N.S. GFP-STAU1 0 200 400 600 800 GFP-STAU1release N.S. ** *** Gel/Liquid G L G L G L G G’ G G’ Wild type FUS gels capture ribonucleoproteins (SMN, STAU), but release the cargo when the FUS gel reverts to liquid. But ALS/FTD mutant FUS gels retain SMN and STAU1 cargo Reversible gel (wild type) Liquid (wild type) Irreversible gel (ALS mutant) Release 4ºC 23ºC 4ºC 23ºC FUS-LC (WT) FUS-LC (Mutant) No release
  • 17. FUS(WT) FUS(G156E) FUS(S96del) GELLED REVERTED TO LIQUID (WT) ; IRREVERSIBLE GEL (MUTANTS)LIQUID 0 1.3 µm 4 SMN Stau1 SMN Stau1 SMN Stau1 Diffusion coefficient µm2/s Imaging of single RNP cargo molecules (SMN, STAU) show free motion of cargo when wild type gels revert to liquid, but retention of cargo by irreversible mutant FUS gels Reversible FUS(WT) Irreversible FUS(G156E)
  • 18. • What effect would sequestration of RNP cargo have on neuronal function? • RNP granules are known to be important for local control of RNA metabolism and new protein synthesis… • Could irreversible fibrillar hydrogel formation sequester RNP granule cargo and…… block new protein synthesis in axon terminals?
  • 19. Non-injected FUS(WT) FUS(P525L) 10 μm FUS501 anti- puromycin antibody Phase Contrast 0.8 1.0 Newproteinsynthesis 1.2 0.6 0.4 0.2 0 N.S. 1.4 1.6 *** ** *** Non-injected Wild type FUS LC domain ALS/FTD Mutant FUS ALS/FTD mutant FUS and FUS-LC domain reduce new protein synthesis in cultured Xenopus neurons
  • 20. Inhibition of local protein synthesis dispersed monomer liquid droplet FUS mutation local protein synthesis regulation of local RNA metabolism and translation reversible hydrogel Irreversible fibrous hydrogel Similar effects on nuclear RNA transcription, splicing?
  • 21. TAKE HOME POINTS 1. Assembly of mutant RNA binding proteins into pathological intraneuronal deposits is functionally important in ALS/FTD caused by mutations in FUS (and other related RNA-binding proteins: TDP43); 2. Assembly is driven by low complexity (LC) domain, which physiologically drive formation of liquid protein droplets and reversible hydrogels… 3. Mutant hydrogels become irreversible if gelled too often or too long.. 4. These irreversible hydrogels represent a novel type of neurotoxic misfolded protein that are different from convential amyloids. 5. These irreversible hydrogels cause neurotoxicity by disturbing RNP granule function, and inhibiting RNA metabolism and protein translation.
  • 22. Tanz CRND Toronto T. Murakami A. Myashita Y. Wakutani G. Schmitt-Ulms M. Zhen F. Chen P. Fraser P. St George-Hyslop Columbia N. Shnieder Cambridge S. Qamar R. Dodd A. Costa C. Holt Q. Lin M. Vendruscolo G. Kaminski C. Kaminski E. Rees Y. Li G. Tartaglia Acknowledgements The Wellcome Trust National Institutes of Health Research Canadian Institutes of Health Research Medical Research Council Alzheimer Society of Ontario
  • 23.
  • 24. 0.8 1.0 NewProteinsynthesis 1.2 0.4 0.6 N.S. *** ** 0 0.2 1.4 1.6 Thapsigargin - - + + - - - - PERKi - + - + - + - + N.S. N.S. The reduced protein synthesis is not to due activation of unfolded protein response (UPR) because PERK inhibition (neurons) or PERK RNAi knock down (C elegans) does not rescue mutant-FUS inhibition of protein synthesis Control Thapsigargin PERKi
  • 25. The reduced protein synthesis is not to due activation of unfolded protein response (UPR) because stress granules are not increased in vivo in mutant FUS animals compared to wild type animals 8 numberofpab-1positivegranules(/neuron) 4 6 N.S. N.S. 0 2 basal condition heat shock 10