3. • A repository for the life science literature
• Built in collaboration with PubMed Central USA (+ PMC Canada)
since 2006
• Led by EMBL-EBI, with the British Library, and the University of
Manchester
• Supported by 20 European life science funders, led by the
Wellcome Trust.
• Built in the context of life science databases at EMBL-EBI
4. Europe PubMed Central
• 28 million abstracts
• 2.5 million full text articles (600K OA)
• Website
• Programmatic access
5. Four reasons to use Europe PMC
• Search abstracts and full text in the
same interface
• Semantic enrichment of full text
• Link to databases that cite articles
• Citation counts for articles (and sort
order)
11. Tools for database developers and
curators
• When people publish articles, they cite data
• When people make data depositions, or curate database
records, they cite articles
• RSS feed alerts when data is cited
and unknown to database
Senay Kafkas Jee-Hyub Kim
12. Some observations about data citation
in research articles
• High precision
• Low frequency (5% of papers or less)
• Re-use by submitting authors is common
• Requirement to parse submission from reuse statements
• Well-cited articles cite well-cited data, but on an entirely
different scale
• Significant proportion of data being cited is not primary
data, but rather views/syntheses of primary data
21. Start at ORCID
Select “Link publications to ORCID Using Europe PMC”
Use Europe PMC to add Publications to your ORCID
Send to ORCID
Linking Publications to ORCID via Europe PMC
24. People
EBI
Yuci Gou
Florian Graf
Senay Kafkas
Jyothi Katuri
Oliver Killian
Jee-Hyub Kim
Nikos Marinos
Jo McEntyre
Andrew Morrison
Xingjun Pi
Philip Rossiter
Francesco Talo
Vid Vartek
University of Manchester
Sophia Ananiadou, NaCTeM
John McNaught, NaCTeM
Bill Black, NaCTeM
Ross Macintyre, Mimas
Vic Lyte, Mimas
Davis Chaplin, Mimas
Yogesh Patel, Mimas
Simon Hubbard
British Library
Anna Kinsey
Lee-Ann Coleman
Rob Rowbotham
Craig Hawkins
Sami Mansoor
OpenAIRE plus collaborators
Hinweis der Redaktion
Perhaps will emerge as important as we go forward, built in the context of core databases @ EBI
We hope to use this linking tool at the EBI as we move forward with the incorporation of ORCIDs into our own institutional reporting wokrflows
Using this in the EMBL-EBI as we go forward in using ORCIDs within our own internal reporting systems and workflows
The success story of thecollaboration between journals and databases regarding data management came out of a combination of vision and need in the scientific and publishing communities, combined with direct engagement with the scientists themselves. ORCIDs provide us with further opportunity to further build and make those relationships more apparent, but it is key to engage scientists, most of which will need to see value in order to subscribe and build this behavior in as standard, just as submitting data to sequence databases is now.