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Business of APIs Conference – Oct 2011

     APIs and Science Publishing

               Nature.com
                Chandran Honour

                  25 Oct 2011
Overview
- Intro
-  About Nature Publishing (3 mins)
-  Science Publishing (3 mins)

-  NPG Developer Community (3mins)
-  Questions (3 mins)
About Nature Publishing Group

         Small, family-owned: less than 100 journals in total
         33 ‘Nature’ titles – including 16 review titles
         Magazines including Scientific American part of the ‘family’
         1000 employees in 17 offices on 5 continents
         28 society partners
         53 academic and society journals
         Online services, databases, conferences/events, multimedia
         We aim to be the best – not the biggest
     •  32% of the top 50 science journals by Impact Factor (16/50);
        (2009 JCR*)
     •  15 NPG journals #1 in their fields by Impact Factor (2009 JCR)




*Source: 2009 Journal Citation Report, (Thomson Reuters, 2010)"
About Nature Publishing: Company values




Nature’s 1869 mission statement, still guides us today:
           “FIRST, to place before the general public the grand results of Scientific Work
            and Scientific Discovery ; and to urge the claims of Science to a more general
            recognition in Education and in Daily Life ;
              And, SECONDLY, to aid Scientific men themselves, by giving early
            information of all advances made in any branch of Natural knowledge
            throughout the world, and by affording them an opportunity of discussing the
            various Scientific questions which arise from time to time.”

As part of Macmillan, we are guided by its values
First Issue of Nature
Nature Publishing - Timeline




                     Nature.com launched - 1995

               –
           Tim Berners Lee invents Web - 1990
Publishing Today – Open Access Content




Why is Open Access important? wider access and availability to the latest
  published research papers is the key to enabling greater collaboration
  amongst scientists and researchers or open science as it is known in the
  scientific community.

How does it work? – removing the cost of downloading the paper means that
  any researcher with a potential interest in the topic can down the information
  and use it to further their own research interests, thus increasing the impact
  of original paper.

How has it grown? – recent studies have shown a significant growth in the
  number of Open Access journals and publishers offering article search at
  journal level. – this now been embraced by NPG and other major publishers
  as a primary means to
Applications
    Productivity Tools
        Citation management

        Authoring tools

        Lab management

      Network/Impact Analysis
        Measuring article/author impact

      Content discovery
        Finding relevant research

      Social / Communication Apps
        Connecting like-minded researchers

    Visualisation
    Other
Google Gadget for Nature.com search
Creative Mashups using PubMed API


                      Nature Blogs + Circos




With self-citations                     External citations only
Visualizing Neuroscience Blog Citations


                      Nature Blogs + Circos




With self-citations                     External citations only
The Developer Portal
➲    Overview – goals:

➲    – to provide quality data to enable the creation of new
     scientific applications

➲    - provide a single place for documentation and support for
     APIs on the web

➲     - to create a developer community to allow sharing of
     ideas and information
The Developer Portal
API Business Model – Developer Tiers


              Tier 3 – commercial developers – bespoke
                                                 .


Tier 2 – non-commercial re-use developers- keyed/rate limited bundles



       Tier 1 – non-commercial developers - keyed/unlimited
   - research developers want to build apps but not monetise them


                     Tier 0- keyless - public access
   – meta-data (search results, abstracts provided by opensearch),
         lists of links (e.g blogs aggregation) and RSS feeds
Keyed API Access via the Portal
•    Keyed access – developers are required to register for API access on
     the portal and receive an API access key after confirming via registration
     link.

•    Quota and rate limits are set – the portal allows configuration of quotas
     are rate limits based on the level of access granted (this is confgured
     manually for premium users and insitutional clients who agree access
     directly with NPG sales staff.)
APIs Overview

    Opensearch – open search gateway allows querying
     of nature.com article meta-data and abstracts via an
     SRU/CQL query interface

    Blogs API search and retrieval of science-related blog
     (meta-data), posts and related papers and journals.
The Future
    Portal launch – planned for Nov 2011
        http://developers.nature.com

    Developer events – website launch, mailing lists, hackathon,
     webinars – planned for 2012

    New APIs
        – Content – toc, articles, top content

        – Jobs

        – Events

        – Research highlights

        – Protocol Exchange (experimental know-how)

        – News
Questions and Answers

    ...

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Chandran Honour, Nature.com

  • 1. Business of APIs Conference – Oct 2011 APIs and Science Publishing Nature.com Chandran Honour 25 Oct 2011
  • 2. Overview - Intro -  About Nature Publishing (3 mins) -  Science Publishing (3 mins) -  NPG Developer Community (3mins) -  Questions (3 mins)
  • 3. About Nature Publishing Group  Small, family-owned: less than 100 journals in total  33 ‘Nature’ titles – including 16 review titles  Magazines including Scientific American part of the ‘family’  1000 employees in 17 offices on 5 continents  28 society partners  53 academic and society journals  Online services, databases, conferences/events, multimedia  We aim to be the best – not the biggest •  32% of the top 50 science journals by Impact Factor (16/50); (2009 JCR*) •  15 NPG journals #1 in their fields by Impact Factor (2009 JCR) *Source: 2009 Journal Citation Report, (Thomson Reuters, 2010)"
  • 4. About Nature Publishing: Company values Nature’s 1869 mission statement, still guides us today: “FIRST, to place before the general public the grand results of Scientific Work and Scientific Discovery ; and to urge the claims of Science to a more general recognition in Education and in Daily Life ; And, SECONDLY, to aid Scientific men themselves, by giving early information of all advances made in any branch of Natural knowledge throughout the world, and by affording them an opportunity of discussing the various Scientific questions which arise from time to time.” As part of Macmillan, we are guided by its values
  • 5. First Issue of Nature
  • 6. Nature Publishing - Timeline Nature.com launched - 1995 – Tim Berners Lee invents Web - 1990
  • 7. Publishing Today – Open Access Content Why is Open Access important? wider access and availability to the latest published research papers is the key to enabling greater collaboration amongst scientists and researchers or open science as it is known in the scientific community. How does it work? – removing the cost of downloading the paper means that any researcher with a potential interest in the topic can down the information and use it to further their own research interests, thus increasing the impact of original paper. How has it grown? – recent studies have shown a significant growth in the number of Open Access journals and publishers offering article search at journal level. – this now been embraced by NPG and other major publishers as a primary means to
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  • 9. Applications   Productivity Tools   Citation management   Authoring tools   Lab management   Network/Impact Analysis   Measuring article/author impact   Content discovery   Finding relevant research   Social / Communication Apps   Connecting like-minded researchers   Visualisation   Other
  • 10. Google Gadget for Nature.com search
  • 11. Creative Mashups using PubMed API Nature Blogs + Circos With self-citations External citations only
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  • 13. Visualizing Neuroscience Blog Citations Nature Blogs + Circos With self-citations External citations only
  • 14. The Developer Portal ➲  Overview – goals: ➲  – to provide quality data to enable the creation of new scientific applications ➲  - provide a single place for documentation and support for APIs on the web ➲  - to create a developer community to allow sharing of ideas and information
  • 16. API Business Model – Developer Tiers Tier 3 – commercial developers – bespoke . Tier 2 – non-commercial re-use developers- keyed/rate limited bundles Tier 1 – non-commercial developers - keyed/unlimited - research developers want to build apps but not monetise them Tier 0- keyless - public access – meta-data (search results, abstracts provided by opensearch), lists of links (e.g blogs aggregation) and RSS feeds
  • 17. Keyed API Access via the Portal •  Keyed access – developers are required to register for API access on the portal and receive an API access key after confirming via registration link. •  Quota and rate limits are set – the portal allows configuration of quotas are rate limits based on the level of access granted (this is confgured manually for premium users and insitutional clients who agree access directly with NPG sales staff.)
  • 18. APIs Overview   Opensearch – open search gateway allows querying of nature.com article meta-data and abstracts via an SRU/CQL query interface   Blogs API search and retrieval of science-related blog (meta-data), posts and related papers and journals.
  • 19. The Future   Portal launch – planned for Nov 2011   http://developers.nature.com   Developer events – website launch, mailing lists, hackathon, webinars – planned for 2012   New APIs   – Content – toc, articles, top content   – Jobs   – Events   – Research highlights   – Protocol Exchange (experimental know-how)   – News