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Progress and Achievements in the Genetic
 Enhancement and Breeding of Cassava
         for Sub-Saharan Africa
                  2005 -2007




             International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Five main roles
• Famine reserve crop
• Rural food staple
• Cash crop for urban consumption
• Industrial raw material
                                                                Food and
• Earner of foreign exchange                                    Beverage

                            Paper                                                                          Mono-
                                                                                                          sodium
                                                                                                         glutamate
                            Wood                              CASSAVA
                                                                                                             Oil
                                                                                                           drilling
                           Animal
                            Feed                                                                         Textile
                                                                  Ethanol
                      International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Major constraints/traits addressed:
Biotic:     Cassava mosaic disease (strains & variants), Cassava
            brown streak disease, bacterial blight, root rots,
            anthracnose disease, green mite and root and tuber scale.
Abiotic:    Soil acidity, soil fertility, drought.
Nutritional: Root dry matter/starch content, mealiness (cooking quality),
             cyanide content, and beta-carotene and protein contents.




                        International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Others:

Postharvest physiological deterioration (PPD).

New Opportunities:
• Industrial and diversified uses (e.g. high root starch content,
  starch quality such as waxy starch, and high sugar content for
  bio-ethanol production)

• Livestock feed (e.g. high root and foliage yield and protein
  content).



                      International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Breeding objectives for the development of
                       new cassava varieties in SSA

1. High root dry matter and starch yield (per unit area and time)
2. Improved quality and nutrition (e.g., high starch content and quality,
   low cyanogenic potential (CNP), mealiness, reduced or delayed
   postharvest deterioration, high beta-carotene content, high protein
   content, foliage yield, and quality)
3. Disease resistance (CMD, CBSD, CBB, CAD, root rots)
4. Pest resistance (CGM, ARTS, and whiteflies)
5. Good plant type
6. Good adaptation to major agroeecologies and production systems


Geographical Focus
 Humid forest, moist savanna, dry savanna and midaltitude
  agroecological zones.
                        International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Major Linkages

NARS
•   19 NARS in West and Central Africa
•   *EARRNET (9 NARS in East Africa)
•   SARRNET (12 NARS in Southern Africa)
•   EMBRAPA and IAC in Brazil.
•   *DR Congo and Tanzania common to both EARRNET and SARRNET




                       International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
ARIS:
 University of Copenhagen, German Collection of Microorganisms and Cell
  Cultures (DSMZ), Plant Virus Division, Braunschweig, Germany),
 Ohio State University
 Donald Danforth Plant Science Center (Mo)
 Swiss Federal Institute of Technology, Zurich (ETH),
 Joint FAO/IAEA Agriculture and Biotechnology Laboratory of the
  International Atomic Energy Agency, Austria
 HarvestPlus Challenge Program (Consortium of universities and research
  institutions worldwide)
 BioCassava Plus of the Grand Challenges in Global Health initiative
  (Consortium of universities and research institutions worldwide)
 Generation Challenge Program (Consortium of universities and research
  institutions worldwide).




                        International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Development and improvement of cassava source populations

        Basic Strategy of Cyclical Selection of Source Population




            Develop a Source Population


     Inter-cross                                                          Evaluate
   Superior Progeny                                                       Progeny


                 Select Superior Progeny

                      International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Ploidy Manipulation



                        Unilateral and Bilateral Sexual Polyploidization
                                         (2x X 2x, 2x X 4x, 4x X 2x, 4x X 4x crosses)


      Somatic Polyploidization
Sexual     Colchicine (0.1%) Sol’n Somatic                                       Sexual
Diploids (2x)                      Tetraploids (4x) X                            Tetraploids (4x)



                 Improved Diploids X                    Improved Tetraploids
                       (2x)                                    (4x)

                                Productive Triploids
                                        (3x)


                         International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Germplasm Introduction (further broaden the genetic base)

CIAT (2003): 38 clones [Latin American landraces (Brazil, Colombia, and Peru),
South-east Asian landraces (Thailand) targeting whitefly resistance, high starch
content, good eating quality, and agroecological adaptation to the lowland humid,
acid savanna, and midaltitude agroecologies.

Agronomic Institute of Campinas, Sao Paulo, Brazil, Brazil (2005): Industrial
varieties of six elite lines and landraces (high starch and cold tolerant) including
yellow-fleshed lines (IAC 576-70, IAC-12,IAC-14, FECULA-3, ESPETO-7, and
BRANCA DE SANTA CATARINA).
2006: Five (IAC 13, IAC 90, IAC 15, Fecula Branca, Fibra, and Olho Junto).

CIAT (2007): half-sib seeds from the backcross generation of the cultivated
cassava x Manihot walkerae for delayed onset of postharvest physiological
deterioration
Latin Amerian lines (breeding lines and land races) with higher storage root
protein and yellow fleshed roots
Five genotypes and 50 tissue culture derived plantlet from seeds of the first
backross generation of selected interspecific progenies for high protein.

Swiss Federal Institute of Technology, Zurich (2007): Some cassava lines for high
starch content from Asia (KU50, MThai 25Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
                             International Institute of and MThai 27).
Acquisition of African adapted germplasm
             (2004)
42 African varieties were introduced from South Africa as virus-
tested in vitro plantlets in 2004 to enrich IITA breeding population
with African adapted gene pools


   Tanzania Landraces and improved varieties                                                            18
   Malawi Landraces and improved varieties                                                              14
   Zambia Landraces and improved varieties                                                              11

Acquisition of micronutrient rich (beta carotene) seed
                    populations
CIAT 2005: = 207 families (4754 seeds)
EMBRAPA, Brazil (through CIAT) 2005: Micronutrient rich
(betacarotene)=59 families (8074 seeds)

  • Evaluation, introgression into breeding pools and selection
                       International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Major Disease/Pest Constraints of Cassava

Mosaic Disease      Bacterial Blight                        Anthracnose                                Root Rots




                        Brown Streak Disease




         Mealybug              Green Mite                            African Root and Tuber Scale




                        International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Host-plant Resistance Breeding




  CMD-resistant               CMD-susceptible           Multiple resistance to diseases and pests




 Improved multiple disease and pest resistant clones showing high levels of
  resistance to CMD
 While incorporating resistance to diseases and pests, popular features of
  African landraces are maintained to aid adoption – Institut international d’agriculture tropicale – www.iita.org
                             International Institute of Tropical Agriculture
Relative                 Variety
                                             TME 419
                                                                                               FWS
                                                                                               12.14
                                                                                                                    DWF Rel. imp
                                                                                                                     3.58 27.40
                    improvement in           92/0326                                           15.14                 3.63 29.18

                    forage yield of          97/4779
                                             92/0057
                                                                                               14.66
                                                                                               18.78
                                                                                                                      3.7 31.67
                                                                                                                     3.82 35.94
                    improved varieties       98/0581                                            16.4                 4.13 46.98

                    over the checks          M98/0040
                                             99/6012
                                                                                               15.09
                                                                                                  15
                                                                                                                     5.18 84.34
                                                                                                                     8.51 202.85
                                             30572                                             16.41                 2.46   0.00
• Among the 43 tested clones seven           4(2)1425                                          13.63                 2.27   0.00
  produced more forage compared to the       82/00058                                          18.47                 3.71   0.00
  control                                    96/1632                                           14.93                 0.88 -68.68
• They include clones 99/6012 (203%),        98/2226                                           15.47                 1.13 -59.79
  M98/0040 (84%), 98/0581 (47%), 92/0057     97/0211                                            9.51                 1.48 -47.33
  (36%), 97/4779 (32%), 92/0326 (29%) and 96/1569                                               7.21                 1.68 -40.21
  TME 419 (27%)                              97/3200                                           14.63                 1.74 -38.08
• Cassava clone 99/6012 gave an              99/2123                                           19.36                 1.77 -37.01
  outstanding performance producing more 99/3073                                               16.46                 1.77 -37.01
  than thrice the forage yield obtainable in Mean                                              15.26                 2.74
  the three checks                           CV                                                   18                   45
                                             SE                                                 0.42                 0.19
FWS = Fresh weight shoot (t/ha); DWF = Dry weight forage (t/ha); Rel. imp = Relative improvement
based on DWF (%)                   International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Mean concentration of micronutrient
                          @ 6, 9, &12MAP
              β-carotene (μg/g)                          Iron                                          Zinc (mg/kg)
                                                          (mg/kg)
MAP           6         9                  12                    9                  12                   9                  12
Mean         0.33      3.08              2.09                9.36                 6.52                9.04                7.93
SE           0.25      0.88              0.65                  0.8                0.78                0.57                0.54

β-carotene        6 & 9 MAP                  DF =24                     T value = -7.96                        p <.0001
β-carotene        6 & 12 MAP                 DF =24                     T value = -7.34                        p <.0001
β-carotene        9 & 12 MAP                 DF =24                     T value = 2.53                         p = .0182
Iron              9 & 12 MAP                 DF =24                     T value = 5.24                         p <.0001
Zinc              9 & 12 MAP                 DF =24                     T value = 2.68                         p =.0132


                            International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Screening for Carotenoids, Fe & Zn

                               Carotenoids (fresh wt basis)
Year          Total          Total         Screening method                         Deep               Light             Min             Max
               No.            No.                                                  yellow              yellow            TC              TC
             families        plants                                               selected            selected
2004/05         476          16,832       Color chart,                                 24                 379               -            10.1
                                          spectrophotometric                                                                            μg/g †
2005/06        982*          19,644       Color chart,                                895                1386             2.8             11.9
                                          spectrophotometric                                                             μg/g             μg/g
2006/07         490           8743        Color chart,                                667                 158            1.23            14.81
                                          spectrophotometric                                                             μg/g            μg/g
2007/08         638          28,865       Color chart,                               1548                >500            1.56            13.27
                                          spectrophotometric
*Comprised of 133 families from CIAT, 59 from Brazil, and 790 local crosses from IITA Ibadan ; †obtainedfrom 2005 clonal evaluation.




                                            International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Fe and Zn (dry wt basis)

Year        No.              No.                      Screening                          Max                   Max
          families          plants                     method                             Fe                   Zn

2004/05     476             16,832                                -                           -                     -
2005/06     982             19,644                      ICPAES                                -                     -

2006/07     490               8743                      ICPAES                         56.81                 73.78
                                                                                       mg/kg                 mg/kg
2007/08     638             28,865                      ICPAES



                     International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
GxE
                                                                  GLM :
                                                                  G x E interactions
                                                                  components for Fe
                                                                  & Zn generally ns


                                                                  AMMI:
                                                                  •High G –TC
                                                                  •High E & G x E–
                                                                  Zn, Fe
                                                                  •G (Fe) ~ G( Zn)


International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
G x E: carotenoid concentration

                                                                                 Carotenoid
                                                                                  concentration is
                                                                                  a stable trait

                                                                                 Single location
                                                                                  selection reliable




              International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Agronomic characteristics, pest reactions of
              promising micronutrient-rich clones

Clone     CMD   CGM           Yield                   DM                    Carotene                   Fe             Zn
                              (t/ha)                  (%)                    (µg/g)                 mg/kg          mg/kg

05/1601   1.0    2.0           36.5                     38.9                   9.4                10.7               12.2
05/1600   3.2    2.5           34.5                     29.0                   6.5                   9.0             12.0
05/1570   1.0    2.0           33.3                     41.9                   2.4                   7.9             12.3
05/0327   1.0    4.5           28.4                     37.8                   6.2                   6.5             14.3
05/1862   1.2    2.5           27.1                     39.3                   4.5                   7.7             10.3
05/0311   1.0    2.5           25.7                     40.9                   5.5                   7.2               8.3
05/0099   1.0    2.0           25.1                     38.9                   5.8                   7.0               8.9
05/1654   1.0    3.0           23.0                     34.9                   6.9                17.4               15.1
05/0476   1.0    3.0           19.7                     40.3                   4.0                   8.9             10.5
05/1652   1.0    2.5           19.5                     31.3                   8.3                   9.4             13.8

                       International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
G x E: YLD, DM, DY


                                                        G effect highest for DM
                                                        E effect highest for YLD
                                                        G x E*** for all traits




International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Percentage nutrient retention during traditional
                       processing of yellow-fleshed cassava storage roots


                                                            120




                                   Percent true retention
                                                            100

                                                             80
                                                                                                                               01/1371
                                                             60                                                                01/1235
                                                                                                                               94/0006
                                                             40

                                                             20

                                                              0
                                                                  Sun-dried Raw fufu   Cooked    Boiled         gari
                                                                    chips               fufu    cassava
                                                                                Processed product


                                        Highest nutrient retention in boiled roots
Maziya-Dixon et. al., 2007.
Submitted to LWT-J. Food Science
                                   International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Carotenoid concentration at different steps of
                    processing cassava storage roots to gari

                                                       18
                                                       16



                              Total carotenoid(ug/g)
                                                       14
                                                       12
                                                                                                                                                TMS94/0006
                                                       10
                                                                                                                                                TMS01/1235
                                                        8
                                                                                                                                                TMS01/1371
                                                         6
                                                         4
                                                         2
                                                         0
                                                              Peeled raw        Grated       Grated and Fermented Roasted gari
                                                               cassava         cassava       fermented pressed granules
                                                                roots           mash            mash mash/cake


Maziya-Dixon et al., 2007. Int. J. Food Science and Technology.
                                                       International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Carotenoids profile of 22 yellow-fleshed
                   cassava genotypes




90% of the carotenoids in cassava is β-carotene
> 50% of the carotenoids in cassava is Trans- β-carotene
                   International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Polyploid breeding for enhanced
                   micronutrient content
 Tetraploidy was also artificially
  induced (0.1% solution of
  cholchicine) in over 20 promising
  yellow-fleshed diploid cassava
  clones.

 4x versus 2x counterparts

 Effect of polyploidization on
  micronutrient content evaluated

  (carotene 4x>carotene2x)

 Tetraploid x diploid crosses for
  more productive triploids
                       International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Tetraploids (mean = 5.41 µg/g) had significantly higher content of total carotene
 than the diploids (mean=4.65 µg/g).
The carotene content of the tetraploids ranged from 0.69 µg/g to 10.05 µg/g; that of
 the diploids ranged from 0.44 to 8.39 µg/g.
The mean dry matter content of the tetraploids (33.45%) was significantly lower
 than that of the diploids (36.78%), though several of the tetraploid clones had higher
 dry matter content of over 36%.
The dry matter content of the diploids ranged from 27.19% to 42.49%; that of the
 tetraploids ranged from 27.82% to 37.91%.
The clone x ploidy level interaction for both total carotenoid and dry matter content
 was also significant.




                             International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Descriptive statistics for chemical composition of cassava leaves
  (DWB) of 630 genotypes
                     Total                   Starch           Protein              Dry                      Fat                Tannin
                     sugars                  (%)              (%)                  Matter (%)               (%)                (mg/100g)
                     (%)

Mean                 8.49                    16.17            30.12                26.37                    6.05               8.85

SE                   0.16                    0.17             0.08                 0.11                     0.04               0.08

Min.                 2.4                     4.0              25.6                 18.0                     1.3                4.0

Max.                 62.8                    35.3             38.0                 53.0                     14.9               17.2

Pr. > F              ns                      ns               ***                  **                       ns                 ns

  * * *, * *, *Significant at P<=0.001, P<=0.01, and P<=0.05 respectively; ns=not significant
  P>=0.05                            International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Descriptive statistics for chemical composition of cassava storage roots
(DWB) of 637 genotypes
            CNP1      Total        Starch              Protein Ash                          Amylose Dry
                      sugars       (%)                 (%)     (%)                          (%)     matter
                      (%)                                                                           (%)

  Mean      14.6      5.83         60.49               2.26                3.65             19.41                  24.81

  SE        0.26      0.11         0.37                0.02                0.03             0.08                   0.17

  Min.      3.9       0.6          20.1                0.7                 2.1              11.6                   11.1

  Max.      39.0.     20.0         93.0                4.8                 6.1              29.2                   42.8

  Pr. > F   ***       ns           ns                  ***                 **               **                     ***
    * * *, * *, *Significant at P<=0.001, P<=0.01, and P<=0.05 respectively; ns=not
    significant P>=0.05; 1= mg/100 g HCN Equivalent
                               International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Descriptive statistics for functional (pasting) characteristics of cassava
 storage roots of 637 genotypes
              Peak                  Breakdown Final                                Setback             Peak time Pasting
              viscosity             viscosity viscosity                            viscosity           (Min.)    temp.( C)

Mean          196                   115                      112                   32                  4.63                   82

SE            2.22                  1.45                     2.14                  0.69                0.02                   0.62

Min.          52                    26                       2.5                   0.2                 1.9                    50

Max.          633                   479                      265                   106                 7.0                    89

Pr. > F       *                     ***                      ns                    ns                  ns                     ns
  * * *, *Significant at P<=0.001, and at P<=0.05 respectively; ns=not significant
  P>=0.05                      International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
There is a relationship between physical, chemical, and functional
What we learned   characteristics of the raw material and the final product, therefore
                  we need to target our technologies

                  Processing resulted in reduction of provitamin A carotenoid
                  retention and that this depended on the genotype and processing
                  method.


                  There is a potential for improving micronutrient status of vulnerable
                  groups




                  International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Shift in nutrient levels with breeding and
          selection for root nutritional quality

             2003/2004                                2006/2007                               % increase
β-carotene    4.8μg/g                                   13μg/g                                 >150
Iron         10.3mg/kg                                >35mg/kg                                 >200
Zinc         10.3mg/kg                                > 60mg/kg                                >400
Protein      1-4%                                      >25%                                    >400




                   International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Deployment of in vitro germplasm




 Virus-free certified tissue culture plantlets
        International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
HS seed families of beta-caroten enriched parental
                                 clones
Country           Seed families                                              No. of seeds
Guinea                 71                                                      10,100
Congo DR                    30                                                      10,000
Uganda                      64                                                      10,100
Kenya                       23                                                      23,000
Malawi                      24                                                      24,000
Angola                      23                                                      23,000
Mozambique                  23                                                      23,000
Sierra Leone                23                                                      46,000
Ghana                       17                                                      18,100
                    International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Some official varietal releases of improved cassava by
                 NARS between 2004 and 2007

Year   Country        Variety name
2004   DR Congo       TMS 95/0211 (Disanka), TMS 95/0528 (Mvuazi), TMS 96/0160
                      (Nsansi), MV 99/0395 (Butamu), MV 99/0038 (Zizila), MM
                      96/0287(Liyayi), and MM 96/7204  (Namale)
2004   Swaziland      Clones 160, 48 & 65, TMS 92/0326, and Rushinga
2005   Ghana:         TMS 97/4962 (Abglifa), TMS 97/4414 (Bankyehemaa), TMS
                      97/3982 (Esam bankye), and TMS 97/4489 (Doku duade)
2005   Nigeria        TMS 97/2205, TMS 98/0505, TMS 98/0510, TMS 98/0581, and
                      TME 419.
2006   Nigeria        TMS 92/0326, TMS 92/0057, TMS 96/1632, TMS 98/0002, and NR
                      87184.
2006   Sierra Leone TMS 92/0057 (SLICASS 6)
2007   Benin          TMS 91/02322 (Manina), TMS 92B/00061(Ina–H),                                                              TMS
                      92/0427(Ina – Premier), and TMS 92/0067 (MR-67)
                           International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Nouvelles variétés en diffusion
     IITA No                              DRC name                           CMD                     Yield (t/ha)


   96/0160                                Nsansi                                       1             22.8

   95/0528                                Mvuazi                                       1             21.6

   MV99/0038                              Zizila                                       1             21.5

   95/0211                                Disanka                                      1             20.7

   MV99/0395                              Butamu                                       1             16.8

   RAV                                    RAV                                          3             18.6

   Boma                                   Boma                                         4             9.46



CMD score of 1-5 whereInternational Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
                        1=no symptoms and 5 =severe damage
Capacity building and technology dissemination


Degree and non-degree training


Training of Trainers


Demand-driven processing workshops




                                     International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Summary of the progress and
                          achievements

 Seven additional sources of resistance to CMD and other prelent disease and
  pest identified in landraces collected from West Africa and used to pyramid and
  diversify and heighten resistance for durable control.
 Significant advances in broadening the genetic base of cassava in Africa
  and producing several improved cassava genetic stocks and breeding
  materials which combines enhanced CMD resistance with improved post
  harvest qualities, multiple pest/disease resistance, wide agrocological
  adaptation and greatly improved yield potential (which may also be used
  directly as varieties) and shared with NARS.
 Massive use of African landraces and Latin America germplasm
  (increased yields in many African locations by 50-100% even without the
  use of fertilizer).




                           International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
 In vitro virus-tested plantlets and seed populations of broad-based and special
  trait source breeding populations exchanged with National programs
 Increasing number of improved varieties released by NARS in major cassava
  producing countries of the cassava belt as a result of broadening the genetic base
  of cassava at IITA with Latin American germplasm and the increased use of
  African landraces in the breeding program.
 Enhanced NARS research capacity in cassava through training under IITA co-
  supervision for MSc, PhD, and/or group training, and extensive collaboration
  throughout SSA.




                             International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Public Awareness and Advocacy




Minister of Agriculture and senior
officials of FMARD–IITA (10 Feb)




                                                      Dignitaries at the high table during the
    VP, FGN on a visit to IITA                        book launch
                         International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Yam Genetic   Key challenges
Improvement
              •       Planting materials
              •       Labour
              •       Germplasm
              •       Soil fertility
              •       Diseases and pests (including weeds)
              •       Post-harvest handling and processing




              International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
High and stable yield of marketable tubers
Genetic       (per unit of area, labour and time)
Improvement
              Pest and disease resistance
Objectives    (nematodes, viruses, anthracnose, tuber rots)

              Tuber characteristics
              (size, shape, branching, food quality, storability)

              Suitability to cropping systems and tolerance to
              abiotic stresses
              (shoot morphology, nutrient responsiveness and
              use efficiency, tolerance to mid- to late season
              drought)

              International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Focus on               Dioscorea rotundata
Selected Food          D. alata
Yams                   D. cayenensis

                       D. dumetorum                                         D. burkilliana

                       D. bulbifera                                         D. esculenta
                       D. opposita                                          D. japonica
                       D. trifida                                           D. nummularia


                       D. abyssinica                                        D. praehensilis




                International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Planting Materials
•Whole tuber
•Tuber fragment
•Milking (double harvest)
•Multiple tuberisation

•Bulbil formation




      International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Mounds for ceremonial yam                         Mounds in savanna zone




  Staking in forest zone                          Staking in savanna zone
                    International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Labour Saving   Good performance under no/limited staking

                Early maturity and/or multiple tuber production

                Suitability to short fallow systems
                   -Nutrient uptake, responsiveness & use
                   efficiency
                   -Pest resistance

                Tuber morphology for easy harvesting

                Long tuber dormancy



                International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Anthracnose disease

    Sources of resistance identified to selected isolates and
    used but variability of pathogen is a continuing challenge
    Abang et al. 2006. Journal of Phytopathology 154: 51-61




                       International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Viruses
   Sources of resistance identified and hybridized

   Odu et al. 2006. Journal of Phytopathology 154: 716-724
   Odu et al. 2006. Journal of Phytopathology 154: 688-693
   Odu et al. 2004. Field Crops Research 89: 97-105.
   Odu et al. 2004. Plant Pathology 53: 141-147




                       International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Example of delivery of new clones of D.
rotundata to partners in a year
Country                Partner                                               No. of clones
Benin                  INRAB                                                 234
Cote d’Ivoire          CSRS                                                     80
Ghana                  CRI & WASDU                                           169
Nigeria                NRCRI                                                 104
Togo                   ITRA                                                  166


                International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Varietal   National Root Crops Research Institute, Nigeria:
             Three new varieties of D. rotundata in 2001
releases
             Four new varieties of D. rotundata in 2003

           Crops Research Institute, Ghana:
             Three new varieties of D. rotundata in 2005




           International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Nematodes

Resistance
identified in
Dioscorea
dumetorum
but not in      Cracks & flaking of skin                   Necrotic spots                                      Dry rot
the two
                                         Damage caused by Scutellonema bradys
dominant
species –
D. alata
and D.
rotundata

                      Galls                            Galls & crazy roots                                 Galls and rot
                                       Damage caused by Meloidogyne spp.
                              International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Insect pests of yam tubers




             Mealybugs
                                                                                         Scale insects




          Yam beetles                                              Tuber moth damage

                      International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Internal Brown Spot




                      International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Opportunities




                International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Colonization (%) of roots of Dioscorea alata by VAM fungi at 4 sites
in Nigeria
Clone                                                              Site
                               Abuja             Ibadan Onne                         Ubiaja Mean
TDa 85/00250                   68.00             84.72             39.94             88.32            70.25
TDa 00/00064                   78.23             45.09             61.06             88.84            68.31
TDa 00/00104                   75.55             55.58             51.98             89.23            68.09
TDa 92-2                       72.90             20.91             34.65             75.77            51.06
TDa 99/00395                   44.49             45.69             34.78             77.29            50.56
TDa 02/00193                   58.97             35.78             48.64             54.64            49.51
TDa 93-36                      50.54             28.47             32.48             82.38            48.47
Mean (36 clones)               68.64             45.15             44.31             78.20            59.08
S.e.d: clone = 6.3, location = 2.1, clone x location = 12.6
CV% = 26.1
                        International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Colonization (%) of roots of Dioscorea rotundata at 4 sites in Nigeria
Clone                                                            Site
                             Abuja Ibadan Onne                                    Ubiaja Mean
TDr 97/00588                 85.42             78.89             58.38            81.23             75.98
TDr 89/02665                 79.38             44.53             78.01            71.50             68.36
TDr 96/01799                 79.03             47.67             77.33            69.00             68.26
TDr 96/00528                 53.73             49.57             52.90            31.25             46.86
TDr 97/00903                 62.38             47.53               1.12           69.78             45.20
TDr 97/00632                 56.73             31.45             51.37            40.47             45.01
EHOBIA                       33.18             30.53             28.83            44.25             34.20
Mean (for 34 clones)         67.99             43.04             57.11            59.73             56.97
S.e.d: clones = 6.54; Location = 2.24; Clone x location = 13.07
CV (%) = 28.1          International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Tuber Density of    Screening for tuber contents of total carotenoids, iron,
                   zinc, ascorbic acid, and phytic acid
Micronutrients
                   Variation in retention of total carotenoids, Fe and Zn in
                   Dioscorea cayenensis food products

                   Influence of environment and genotype x environment
                   interactions on tuber contents of iron and zinc

                   Total carotenoids (in µg/g fwb)
                   Dioscorea cayenensis (82 accessions)
                   Range: 1.25 – 5.12
                   Mean: 2.72 + 0.80

                   D. dumetorum
                   Two accessions with values of 22.29 and 26.60 µg/g


                   International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Tuber Density of   Tuber content of ascorbic acid (in mg/100g fwb) :
Micronutrients
                   D. rotundata (325 accessions)
                   Range: 3.56 – 16.87
                   Mean: 8.3 + 2.26

                   D. cayenensis (79 accessions)
                   Range: 4.19 – 11.34
                   Mean: 7.85 + 1.29

                   D. dumetorum (31 accessions)
                   Range: 15.42 – 39.43
                   Mean: 25.83 + 6.29

                   International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Tuber nutrient contents of 31 genotypes of D. rotundata evaluated
at 4 sites over two years in Nigeria




                 Iron                      Zinc                                Ascorbic acid
SOV     DF       MS       % SS             MS      % SS                        MS      % SS
Total   371      4.90                      3.94                                2.46
TRT     123      9.74*** 65.8              9.02*** 75.8                        4.76*** 64.2
GEN     30       13.76*** 34.4             23.08***62.4                        5.68*** 29.2
ENV     3        115.94***29.0             45.60***12.3                        61.40*** 31.5
GxE     90       4.86*** 36.5              3.10*** 25.2                        2.56*** 39.4



                          International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Micronutrients   Retention (%) of micronutrients in products from
                   15 genotypes of Dioscorea cayenensis

                        Boiled yam                                    Pounded yam                        Flour
                 Carot. 31-97                                         9-97                               11-75
                        (69.6)                                        (48.6)                             (43.2)

                 Iron             56-99                               66-99                              18-44
                                  (77.2)                              (80.3)                             (29.4)

                 Zinc             70-96                               62-97                              13-32
                                  (85.4)                              (83.6)                             (22.6)



                 International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Descriptive statistics for functional (pasting) characteristics of 33 genotypes
of D. rotundata grown at Abuja, Nigeria

              Peak                  Breakdown               Final               Setback            Peak time             Pasting
              viscosity             viscosity               viscosity           viscosity          (Min.)                temp.( C)

Mean          209                   38                      247                 76                 6                     84

SE            11.7                  6.6                     12.86               7.66               0.11                  0.17


Min.          69                    4                       97                  29                 5                     82

Max.          338                   147                     397                 209                7                     86

Pr. > F       **                    **                      **                  *                  **                    ns


  * *, *Significant at P<=0.01, and at P=0.05 respectively; ns=not significant
  P>=0.05                     International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Evaluation of Dioscorea alata varieties for
                      making pounded yam

Mean pasting        350.00
properties of D.    300.00
alata and control   250.00
                    200.00                                                                                   D. alata
                    150.00                                                                                   D. rotundata

                    100.00
                     50.00
                      0.00
                                                   gh


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                              .




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                                                 is c
                                                ow
                            isc




                                                 ac

                                              t im

                                                m
                                             ou




                                            lv

                                            tb
                          V




                                           kd




                                            te
                                           Tr




                                          ng
                                         Se
                                         na
                       ak




                                        ea




                                        ng
                                      sti
                                      Fi
                     Pe




                                     Br




                                    sti
                                   Pa

                                  Pa

                    International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Mean scores for pounded yam from D. alata
      Variety      Color     Smoo.              Cons.             Elast.             Stick.             Hard.




      Mean         4.66      4.22               3.97              3.56               4.22               4.66


      SE           0.27      0.11               0.14              0.14               0.14               0.12


      P level      ***       ***                ***               **                 **                 ***

Scale of 1 to 9, where 1= extremely inferior, 2= much inferior, 3= moderately
inferior, 4 = slightly inferior, 5= no difference, 6= slightly better, 7=moderately
better, 8=much better, 9= extremely better
                             International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Benin
           Institut National des Recherches Agricoles du Benin (INRAB)
           Centre régional de Nutrition et d’Alimentation Appliquées (CERNA)


Key NARS   Cameroon
           University of Dschang
Partners   Institute of Agricultural Research for Development (IRAD)
           The University of Buea
           AGROCOM

           Cote d’Ivoire
           Centre National de Recherche Agronomique (CNRA)
           Centre Suisse de Recherches Scientifiques en Côte d’Ivoire (CSRS)
           University of Abobo Adjame

           Ghana
           Crops Research Institute (CRI)
           Savanna Agric. Research Institute (SARI)
           Kwame Nkrumah University of Science and Technology (KNUST)
           University For Development Studies

           Nigeria
           National Root Crops Research Institute (NRCRI)
           Bowen University
           Ladoke Akintola University of Technology (LAUTECH)

           Togo
           Institut Togolais des Recherches Agronomiques (ITRA)
           International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
Other Research   •    CIRAD, France
Partners         •    Virginia State University, USA
                 •    University of Ibadan, Nigeria
                 •    Federal University of Technology, Nigeria
                 •    Ahmadu Bello University, Zaria, Nigeria
                 •    University of Nigeria, Nigeria
                 • Ladoke Akintola University of Technology,
                   Nigeria

                 Graduate Training 2007
                 • 10 students conducting research towards PhD
                   degrees




                 International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org

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Progress and Achievements in the Genetic Enhancement and Breeding of Cassava for Sub-Saharan Africa

  • 1. Progress and Achievements in the Genetic Enhancement and Breeding of Cassava for Sub-Saharan Africa 2005 -2007 International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 2. Five main roles • Famine reserve crop • Rural food staple • Cash crop for urban consumption • Industrial raw material Food and • Earner of foreign exchange Beverage Paper Mono- sodium glutamate Wood CASSAVA Oil drilling Animal Feed Textile Ethanol International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 3. Major constraints/traits addressed: Biotic: Cassava mosaic disease (strains & variants), Cassava brown streak disease, bacterial blight, root rots, anthracnose disease, green mite and root and tuber scale. Abiotic: Soil acidity, soil fertility, drought. Nutritional: Root dry matter/starch content, mealiness (cooking quality), cyanide content, and beta-carotene and protein contents. International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 4. Others: Postharvest physiological deterioration (PPD). New Opportunities: • Industrial and diversified uses (e.g. high root starch content, starch quality such as waxy starch, and high sugar content for bio-ethanol production) • Livestock feed (e.g. high root and foliage yield and protein content). International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 5. Breeding objectives for the development of new cassava varieties in SSA 1. High root dry matter and starch yield (per unit area and time) 2. Improved quality and nutrition (e.g., high starch content and quality, low cyanogenic potential (CNP), mealiness, reduced or delayed postharvest deterioration, high beta-carotene content, high protein content, foliage yield, and quality) 3. Disease resistance (CMD, CBSD, CBB, CAD, root rots) 4. Pest resistance (CGM, ARTS, and whiteflies) 5. Good plant type 6. Good adaptation to major agroeecologies and production systems Geographical Focus  Humid forest, moist savanna, dry savanna and midaltitude agroecological zones. International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 6. Major Linkages NARS • 19 NARS in West and Central Africa • *EARRNET (9 NARS in East Africa) • SARRNET (12 NARS in Southern Africa) • EMBRAPA and IAC in Brazil. • *DR Congo and Tanzania common to both EARRNET and SARRNET International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 7. ARIS:  University of Copenhagen, German Collection of Microorganisms and Cell Cultures (DSMZ), Plant Virus Division, Braunschweig, Germany),  Ohio State University  Donald Danforth Plant Science Center (Mo)  Swiss Federal Institute of Technology, Zurich (ETH),  Joint FAO/IAEA Agriculture and Biotechnology Laboratory of the International Atomic Energy Agency, Austria  HarvestPlus Challenge Program (Consortium of universities and research institutions worldwide)  BioCassava Plus of the Grand Challenges in Global Health initiative (Consortium of universities and research institutions worldwide)  Generation Challenge Program (Consortium of universities and research institutions worldwide). International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 8. Development and improvement of cassava source populations Basic Strategy of Cyclical Selection of Source Population Develop a Source Population Inter-cross Evaluate Superior Progeny Progeny Select Superior Progeny International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 9. Ploidy Manipulation Unilateral and Bilateral Sexual Polyploidization (2x X 2x, 2x X 4x, 4x X 2x, 4x X 4x crosses) Somatic Polyploidization Sexual Colchicine (0.1%) Sol’n Somatic Sexual Diploids (2x) Tetraploids (4x) X Tetraploids (4x) Improved Diploids X Improved Tetraploids (2x) (4x) Productive Triploids (3x) International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 10. Germplasm Introduction (further broaden the genetic base) CIAT (2003): 38 clones [Latin American landraces (Brazil, Colombia, and Peru), South-east Asian landraces (Thailand) targeting whitefly resistance, high starch content, good eating quality, and agroecological adaptation to the lowland humid, acid savanna, and midaltitude agroecologies. Agronomic Institute of Campinas, Sao Paulo, Brazil, Brazil (2005): Industrial varieties of six elite lines and landraces (high starch and cold tolerant) including yellow-fleshed lines (IAC 576-70, IAC-12,IAC-14, FECULA-3, ESPETO-7, and BRANCA DE SANTA CATARINA). 2006: Five (IAC 13, IAC 90, IAC 15, Fecula Branca, Fibra, and Olho Junto). CIAT (2007): half-sib seeds from the backcross generation of the cultivated cassava x Manihot walkerae for delayed onset of postharvest physiological deterioration Latin Amerian lines (breeding lines and land races) with higher storage root protein and yellow fleshed roots Five genotypes and 50 tissue culture derived plantlet from seeds of the first backross generation of selected interspecific progenies for high protein. Swiss Federal Institute of Technology, Zurich (2007): Some cassava lines for high starch content from Asia (KU50, MThai 25Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org International Institute of and MThai 27).
  • 11. Acquisition of African adapted germplasm (2004) 42 African varieties were introduced from South Africa as virus- tested in vitro plantlets in 2004 to enrich IITA breeding population with African adapted gene pools Tanzania Landraces and improved varieties 18 Malawi Landraces and improved varieties 14 Zambia Landraces and improved varieties 11 Acquisition of micronutrient rich (beta carotene) seed populations CIAT 2005: = 207 families (4754 seeds) EMBRAPA, Brazil (through CIAT) 2005: Micronutrient rich (betacarotene)=59 families (8074 seeds) • Evaluation, introgression into breeding pools and selection International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 12. Major Disease/Pest Constraints of Cassava Mosaic Disease Bacterial Blight Anthracnose Root Rots Brown Streak Disease Mealybug Green Mite African Root and Tuber Scale International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 13. Host-plant Resistance Breeding CMD-resistant CMD-susceptible Multiple resistance to diseases and pests  Improved multiple disease and pest resistant clones showing high levels of resistance to CMD  While incorporating resistance to diseases and pests, popular features of African landraces are maintained to aid adoption – Institut international d’agriculture tropicale – www.iita.org International Institute of Tropical Agriculture
  • 14. Relative Variety TME 419 FWS 12.14 DWF Rel. imp 3.58 27.40 improvement in 92/0326 15.14 3.63 29.18 forage yield of 97/4779 92/0057 14.66 18.78 3.7 31.67 3.82 35.94 improved varieties 98/0581 16.4 4.13 46.98 over the checks M98/0040 99/6012 15.09 15 5.18 84.34 8.51 202.85 30572 16.41 2.46 0.00 • Among the 43 tested clones seven 4(2)1425 13.63 2.27 0.00 produced more forage compared to the 82/00058 18.47 3.71 0.00 control 96/1632 14.93 0.88 -68.68 • They include clones 99/6012 (203%), 98/2226 15.47 1.13 -59.79 M98/0040 (84%), 98/0581 (47%), 92/0057 97/0211 9.51 1.48 -47.33 (36%), 97/4779 (32%), 92/0326 (29%) and 96/1569 7.21 1.68 -40.21 TME 419 (27%) 97/3200 14.63 1.74 -38.08 • Cassava clone 99/6012 gave an 99/2123 19.36 1.77 -37.01 outstanding performance producing more 99/3073 16.46 1.77 -37.01 than thrice the forage yield obtainable in Mean 15.26 2.74 the three checks CV 18 45 SE 0.42 0.19 FWS = Fresh weight shoot (t/ha); DWF = Dry weight forage (t/ha); Rel. imp = Relative improvement based on DWF (%) International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 15. Mean concentration of micronutrient @ 6, 9, &12MAP β-carotene (μg/g) Iron Zinc (mg/kg) (mg/kg) MAP 6 9 12 9 12 9 12 Mean 0.33 3.08 2.09 9.36 6.52 9.04 7.93 SE 0.25 0.88 0.65 0.8 0.78 0.57 0.54 β-carotene 6 & 9 MAP DF =24 T value = -7.96 p <.0001 β-carotene 6 & 12 MAP DF =24 T value = -7.34 p <.0001 β-carotene 9 & 12 MAP DF =24 T value = 2.53 p = .0182 Iron 9 & 12 MAP DF =24 T value = 5.24 p <.0001 Zinc 9 & 12 MAP DF =24 T value = 2.68 p =.0132 International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 16. Screening for Carotenoids, Fe & Zn Carotenoids (fresh wt basis) Year Total Total Screening method Deep Light Min Max No. No. yellow yellow TC TC families plants selected selected 2004/05 476 16,832 Color chart, 24 379 - 10.1 spectrophotometric μg/g † 2005/06 982* 19,644 Color chart, 895 1386 2.8 11.9 spectrophotometric μg/g μg/g 2006/07 490 8743 Color chart, 667 158 1.23 14.81 spectrophotometric μg/g μg/g 2007/08 638 28,865 Color chart, 1548 >500 1.56 13.27 spectrophotometric *Comprised of 133 families from CIAT, 59 from Brazil, and 790 local crosses from IITA Ibadan ; †obtainedfrom 2005 clonal evaluation. International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 17. Fe and Zn (dry wt basis) Year No. No. Screening Max Max families plants method Fe Zn 2004/05 476 16,832 - - - 2005/06 982 19,644 ICPAES - - 2006/07 490 8743 ICPAES 56.81 73.78 mg/kg mg/kg 2007/08 638 28,865 ICPAES International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 18. GxE GLM : G x E interactions components for Fe & Zn generally ns AMMI: •High G –TC •High E & G x E– Zn, Fe •G (Fe) ~ G( Zn) International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 19. G x E: carotenoid concentration  Carotenoid concentration is a stable trait  Single location selection reliable International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 20. Agronomic characteristics, pest reactions of promising micronutrient-rich clones Clone CMD CGM Yield DM Carotene Fe Zn (t/ha) (%) (µg/g) mg/kg mg/kg 05/1601 1.0 2.0 36.5 38.9 9.4 10.7 12.2 05/1600 3.2 2.5 34.5 29.0 6.5 9.0 12.0 05/1570 1.0 2.0 33.3 41.9 2.4 7.9 12.3 05/0327 1.0 4.5 28.4 37.8 6.2 6.5 14.3 05/1862 1.2 2.5 27.1 39.3 4.5 7.7 10.3 05/0311 1.0 2.5 25.7 40.9 5.5 7.2 8.3 05/0099 1.0 2.0 25.1 38.9 5.8 7.0 8.9 05/1654 1.0 3.0 23.0 34.9 6.9 17.4 15.1 05/0476 1.0 3.0 19.7 40.3 4.0 8.9 10.5 05/1652 1.0 2.5 19.5 31.3 8.3 9.4 13.8 International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 21. G x E: YLD, DM, DY G effect highest for DM E effect highest for YLD G x E*** for all traits International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 22. Percentage nutrient retention during traditional processing of yellow-fleshed cassava storage roots 120 Percent true retention 100 80 01/1371 60 01/1235 94/0006 40 20 0 Sun-dried Raw fufu Cooked Boiled gari chips fufu cassava Processed product Highest nutrient retention in boiled roots Maziya-Dixon et. al., 2007. Submitted to LWT-J. Food Science International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 23. Carotenoid concentration at different steps of processing cassava storage roots to gari 18 16 Total carotenoid(ug/g) 14 12 TMS94/0006 10 TMS01/1235 8 TMS01/1371 6 4 2 0 Peeled raw Grated Grated and Fermented Roasted gari cassava cassava fermented pressed granules roots mash mash mash/cake Maziya-Dixon et al., 2007. Int. J. Food Science and Technology. International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 24. Carotenoids profile of 22 yellow-fleshed cassava genotypes 90% of the carotenoids in cassava is β-carotene > 50% of the carotenoids in cassava is Trans- β-carotene International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 25. Polyploid breeding for enhanced micronutrient content  Tetraploidy was also artificially induced (0.1% solution of cholchicine) in over 20 promising yellow-fleshed diploid cassava clones.  4x versus 2x counterparts  Effect of polyploidization on micronutrient content evaluated (carotene 4x>carotene2x)  Tetraploid x diploid crosses for more productive triploids International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 26. Tetraploids (mean = 5.41 µg/g) had significantly higher content of total carotene than the diploids (mean=4.65 µg/g). The carotene content of the tetraploids ranged from 0.69 µg/g to 10.05 µg/g; that of the diploids ranged from 0.44 to 8.39 µg/g. The mean dry matter content of the tetraploids (33.45%) was significantly lower than that of the diploids (36.78%), though several of the tetraploid clones had higher dry matter content of over 36%. The dry matter content of the diploids ranged from 27.19% to 42.49%; that of the tetraploids ranged from 27.82% to 37.91%. The clone x ploidy level interaction for both total carotenoid and dry matter content was also significant. International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 27. Descriptive statistics for chemical composition of cassava leaves (DWB) of 630 genotypes Total Starch Protein Dry Fat Tannin sugars (%) (%) Matter (%) (%) (mg/100g) (%) Mean 8.49 16.17 30.12 26.37 6.05 8.85 SE 0.16 0.17 0.08 0.11 0.04 0.08 Min. 2.4 4.0 25.6 18.0 1.3 4.0 Max. 62.8 35.3 38.0 53.0 14.9 17.2 Pr. > F ns ns *** ** ns ns * * *, * *, *Significant at P<=0.001, P<=0.01, and P<=0.05 respectively; ns=not significant P>=0.05 International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 28. Descriptive statistics for chemical composition of cassava storage roots (DWB) of 637 genotypes CNP1 Total Starch Protein Ash Amylose Dry sugars (%) (%) (%) (%) matter (%) (%) Mean 14.6 5.83 60.49 2.26 3.65 19.41 24.81 SE 0.26 0.11 0.37 0.02 0.03 0.08 0.17 Min. 3.9 0.6 20.1 0.7 2.1 11.6 11.1 Max. 39.0. 20.0 93.0 4.8 6.1 29.2 42.8 Pr. > F *** ns ns *** ** ** *** * * *, * *, *Significant at P<=0.001, P<=0.01, and P<=0.05 respectively; ns=not significant P>=0.05; 1= mg/100 g HCN Equivalent International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 29. Descriptive statistics for functional (pasting) characteristics of cassava storage roots of 637 genotypes Peak Breakdown Final Setback Peak time Pasting viscosity viscosity viscosity viscosity (Min.) temp.( C) Mean 196 115 112 32 4.63 82 SE 2.22 1.45 2.14 0.69 0.02 0.62 Min. 52 26 2.5 0.2 1.9 50 Max. 633 479 265 106 7.0 89 Pr. > F * *** ns ns ns ns * * *, *Significant at P<=0.001, and at P<=0.05 respectively; ns=not significant P>=0.05 International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 30. There is a relationship between physical, chemical, and functional What we learned characteristics of the raw material and the final product, therefore we need to target our technologies Processing resulted in reduction of provitamin A carotenoid retention and that this depended on the genotype and processing method. There is a potential for improving micronutrient status of vulnerable groups International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 31. Shift in nutrient levels with breeding and selection for root nutritional quality 2003/2004 2006/2007 % increase β-carotene 4.8μg/g 13μg/g >150 Iron 10.3mg/kg >35mg/kg >200 Zinc 10.3mg/kg > 60mg/kg >400 Protein 1-4% >25% >400 International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 32. Deployment of in vitro germplasm Virus-free certified tissue culture plantlets International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 33. HS seed families of beta-caroten enriched parental clones Country Seed families No. of seeds Guinea 71 10,100 Congo DR 30 10,000 Uganda 64 10,100 Kenya 23 23,000 Malawi 24 24,000 Angola 23 23,000 Mozambique 23 23,000 Sierra Leone 23 46,000 Ghana 17 18,100 International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 34. Some official varietal releases of improved cassava by NARS between 2004 and 2007 Year Country Variety name 2004 DR Congo TMS 95/0211 (Disanka), TMS 95/0528 (Mvuazi), TMS 96/0160 (Nsansi), MV 99/0395 (Butamu), MV 99/0038 (Zizila), MM 96/0287(Liyayi), and MM 96/7204 (Namale) 2004 Swaziland Clones 160, 48 & 65, TMS 92/0326, and Rushinga 2005 Ghana: TMS 97/4962 (Abglifa), TMS 97/4414 (Bankyehemaa), TMS 97/3982 (Esam bankye), and TMS 97/4489 (Doku duade) 2005 Nigeria TMS 97/2205, TMS 98/0505, TMS 98/0510, TMS 98/0581, and TME 419. 2006 Nigeria TMS 92/0326, TMS 92/0057, TMS 96/1632, TMS 98/0002, and NR 87184. 2006 Sierra Leone TMS 92/0057 (SLICASS 6) 2007 Benin TMS 91/02322 (Manina), TMS 92B/00061(Ina–H), TMS 92/0427(Ina – Premier), and TMS 92/0067 (MR-67) International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 35. Nouvelles variétés en diffusion IITA No DRC name CMD Yield (t/ha) 96/0160 Nsansi 1 22.8 95/0528 Mvuazi 1 21.6 MV99/0038 Zizila 1 21.5 95/0211 Disanka 1 20.7 MV99/0395 Butamu 1 16.8 RAV RAV 3 18.6 Boma Boma 4 9.46 CMD score of 1-5 whereInternational Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org 1=no symptoms and 5 =severe damage
  • 36. Capacity building and technology dissemination Degree and non-degree training Training of Trainers Demand-driven processing workshops International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 37. Summary of the progress and achievements  Seven additional sources of resistance to CMD and other prelent disease and pest identified in landraces collected from West Africa and used to pyramid and diversify and heighten resistance for durable control.  Significant advances in broadening the genetic base of cassava in Africa and producing several improved cassava genetic stocks and breeding materials which combines enhanced CMD resistance with improved post harvest qualities, multiple pest/disease resistance, wide agrocological adaptation and greatly improved yield potential (which may also be used directly as varieties) and shared with NARS.  Massive use of African landraces and Latin America germplasm (increased yields in many African locations by 50-100% even without the use of fertilizer). International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 38.  In vitro virus-tested plantlets and seed populations of broad-based and special trait source breeding populations exchanged with National programs  Increasing number of improved varieties released by NARS in major cassava producing countries of the cassava belt as a result of broadening the genetic base of cassava at IITA with Latin American germplasm and the increased use of African landraces in the breeding program.  Enhanced NARS research capacity in cassava through training under IITA co- supervision for MSc, PhD, and/or group training, and extensive collaboration throughout SSA. International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 39. Public Awareness and Advocacy Minister of Agriculture and senior officials of FMARD–IITA (10 Feb) Dignitaries at the high table during the VP, FGN on a visit to IITA book launch International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 40. Yam Genetic Key challenges Improvement • Planting materials • Labour • Germplasm • Soil fertility • Diseases and pests (including weeds) • Post-harvest handling and processing International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 41. High and stable yield of marketable tubers Genetic (per unit of area, labour and time) Improvement Pest and disease resistance Objectives (nematodes, viruses, anthracnose, tuber rots) Tuber characteristics (size, shape, branching, food quality, storability) Suitability to cropping systems and tolerance to abiotic stresses (shoot morphology, nutrient responsiveness and use efficiency, tolerance to mid- to late season drought) International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 42. Focus on Dioscorea rotundata Selected Food D. alata Yams D. cayenensis D. dumetorum D. burkilliana D. bulbifera D. esculenta D. opposita D. japonica D. trifida D. nummularia D. abyssinica D. praehensilis International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 43. Planting Materials •Whole tuber •Tuber fragment •Milking (double harvest) •Multiple tuberisation •Bulbil formation International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 44. Mounds for ceremonial yam Mounds in savanna zone Staking in forest zone Staking in savanna zone International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 45. Labour Saving Good performance under no/limited staking Early maturity and/or multiple tuber production Suitability to short fallow systems -Nutrient uptake, responsiveness & use efficiency -Pest resistance Tuber morphology for easy harvesting Long tuber dormancy International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 46. Anthracnose disease Sources of resistance identified to selected isolates and used but variability of pathogen is a continuing challenge Abang et al. 2006. Journal of Phytopathology 154: 51-61 International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 47. Viruses Sources of resistance identified and hybridized Odu et al. 2006. Journal of Phytopathology 154: 716-724 Odu et al. 2006. Journal of Phytopathology 154: 688-693 Odu et al. 2004. Field Crops Research 89: 97-105. Odu et al. 2004. Plant Pathology 53: 141-147 International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 48. Example of delivery of new clones of D. rotundata to partners in a year Country Partner No. of clones Benin INRAB 234 Cote d’Ivoire CSRS 80 Ghana CRI & WASDU 169 Nigeria NRCRI 104 Togo ITRA 166 International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 49. Varietal National Root Crops Research Institute, Nigeria: Three new varieties of D. rotundata in 2001 releases Four new varieties of D. rotundata in 2003 Crops Research Institute, Ghana: Three new varieties of D. rotundata in 2005 International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 50. Nematodes Resistance identified in Dioscorea dumetorum but not in Cracks & flaking of skin Necrotic spots Dry rot the two Damage caused by Scutellonema bradys dominant species – D. alata and D. rotundata Galls Galls & crazy roots Galls and rot Damage caused by Meloidogyne spp. International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 51. Insect pests of yam tubers Mealybugs Scale insects Yam beetles Tuber moth damage International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 52. Internal Brown Spot International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 53. Opportunities International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 54. Colonization (%) of roots of Dioscorea alata by VAM fungi at 4 sites in Nigeria Clone Site Abuja Ibadan Onne Ubiaja Mean TDa 85/00250 68.00 84.72 39.94 88.32 70.25 TDa 00/00064 78.23 45.09 61.06 88.84 68.31 TDa 00/00104 75.55 55.58 51.98 89.23 68.09 TDa 92-2 72.90 20.91 34.65 75.77 51.06 TDa 99/00395 44.49 45.69 34.78 77.29 50.56 TDa 02/00193 58.97 35.78 48.64 54.64 49.51 TDa 93-36 50.54 28.47 32.48 82.38 48.47 Mean (36 clones) 68.64 45.15 44.31 78.20 59.08 S.e.d: clone = 6.3, location = 2.1, clone x location = 12.6 CV% = 26.1 International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 55. Colonization (%) of roots of Dioscorea rotundata at 4 sites in Nigeria Clone Site Abuja Ibadan Onne Ubiaja Mean TDr 97/00588 85.42 78.89 58.38 81.23 75.98 TDr 89/02665 79.38 44.53 78.01 71.50 68.36 TDr 96/01799 79.03 47.67 77.33 69.00 68.26 TDr 96/00528 53.73 49.57 52.90 31.25 46.86 TDr 97/00903 62.38 47.53 1.12 69.78 45.20 TDr 97/00632 56.73 31.45 51.37 40.47 45.01 EHOBIA 33.18 30.53 28.83 44.25 34.20 Mean (for 34 clones) 67.99 43.04 57.11 59.73 56.97 S.e.d: clones = 6.54; Location = 2.24; Clone x location = 13.07 CV (%) = 28.1 International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 56. Tuber Density of Screening for tuber contents of total carotenoids, iron, zinc, ascorbic acid, and phytic acid Micronutrients Variation in retention of total carotenoids, Fe and Zn in Dioscorea cayenensis food products Influence of environment and genotype x environment interactions on tuber contents of iron and zinc Total carotenoids (in µg/g fwb) Dioscorea cayenensis (82 accessions) Range: 1.25 – 5.12 Mean: 2.72 + 0.80 D. dumetorum Two accessions with values of 22.29 and 26.60 µg/g International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 57. Tuber Density of Tuber content of ascorbic acid (in mg/100g fwb) : Micronutrients D. rotundata (325 accessions) Range: 3.56 – 16.87 Mean: 8.3 + 2.26 D. cayenensis (79 accessions) Range: 4.19 – 11.34 Mean: 7.85 + 1.29 D. dumetorum (31 accessions) Range: 15.42 – 39.43 Mean: 25.83 + 6.29 International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 58. Tuber nutrient contents of 31 genotypes of D. rotundata evaluated at 4 sites over two years in Nigeria Iron Zinc Ascorbic acid SOV DF MS % SS MS % SS MS % SS Total 371 4.90 3.94 2.46 TRT 123 9.74*** 65.8 9.02*** 75.8 4.76*** 64.2 GEN 30 13.76*** 34.4 23.08***62.4 5.68*** 29.2 ENV 3 115.94***29.0 45.60***12.3 61.40*** 31.5 GxE 90 4.86*** 36.5 3.10*** 25.2 2.56*** 39.4 International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 59. Micronutrients Retention (%) of micronutrients in products from 15 genotypes of Dioscorea cayenensis Boiled yam Pounded yam Flour Carot. 31-97 9-97 11-75 (69.6) (48.6) (43.2) Iron 56-99 66-99 18-44 (77.2) (80.3) (29.4) Zinc 70-96 62-97 13-32 (85.4) (83.6) (22.6) International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 60. Descriptive statistics for functional (pasting) characteristics of 33 genotypes of D. rotundata grown at Abuja, Nigeria Peak Breakdown Final Setback Peak time Pasting viscosity viscosity viscosity viscosity (Min.) temp.( C) Mean 209 38 247 76 6 84 SE 11.7 6.6 12.86 7.66 0.11 0.17 Min. 69 4 97 29 5 82 Max. 338 147 397 209 7 86 Pr. > F ** ** ** * ** ns * *, *Significant at P<=0.01, and at P=0.05 respectively; ns=not significant P>=0.05 International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 61. Evaluation of Dioscorea alata varieties for making pounded yam Mean pasting 350.00 properties of D. 300.00 alata and control 250.00 200.00 D. alata 150.00 D. rotundata 100.00 50.00 0.00 gh n . k p. . e is c ow isc ac t im m ou lv tb V kd te Tr ng Se na ak ea ng sti Fi Pe Br sti Pa Pa International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 62. Mean scores for pounded yam from D. alata Variety Color Smoo. Cons. Elast. Stick. Hard. Mean 4.66 4.22 3.97 3.56 4.22 4.66 SE 0.27 0.11 0.14 0.14 0.14 0.12 P level *** *** *** ** ** *** Scale of 1 to 9, where 1= extremely inferior, 2= much inferior, 3= moderately inferior, 4 = slightly inferior, 5= no difference, 6= slightly better, 7=moderately better, 8=much better, 9= extremely better International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 63. Benin Institut National des Recherches Agricoles du Benin (INRAB) Centre régional de Nutrition et d’Alimentation Appliquées (CERNA) Key NARS Cameroon University of Dschang Partners Institute of Agricultural Research for Development (IRAD) The University of Buea AGROCOM Cote d’Ivoire Centre National de Recherche Agronomique (CNRA) Centre Suisse de Recherches Scientifiques en Côte d’Ivoire (CSRS) University of Abobo Adjame Ghana Crops Research Institute (CRI) Savanna Agric. Research Institute (SARI) Kwame Nkrumah University of Science and Technology (KNUST) University For Development Studies Nigeria National Root Crops Research Institute (NRCRI) Bowen University Ladoke Akintola University of Technology (LAUTECH) Togo Institut Togolais des Recherches Agronomiques (ITRA) International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org
  • 64. Other Research • CIRAD, France Partners • Virginia State University, USA • University of Ibadan, Nigeria • Federal University of Technology, Nigeria • Ahmadu Bello University, Zaria, Nigeria • University of Nigeria, Nigeria • Ladoke Akintola University of Technology, Nigeria Graduate Training 2007 • 10 students conducting research towards PhD degrees International Institute of Tropical Agriculture – Institut international d’agriculture tropicale – www.iita.org