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GES DISC
DAAC

The Goddard DAAC
http://daac.gsfc.nasa.gov

HDF and HDF-EOS
Experiences and
Applications
Presented by:
James Johnson,
SSAI
February 28, 2002

HDF-EOS Workshop V

1
Science Disciplines
GES DISC
DAAC

Atmospheric Dynamics

Global Biosphere
Ocean Color
• CZCS
• OCTS
• SeaWiFS
• Terra MODIS
• Aqua MODIS

• TOVS Pathfinder
• Data Assimilation
• Terra MODIS
• Aqua AIRS
• Aqua MODIS

TOVS 1000 hPa Monthly Mean Specific Humidity

Hydrology

Black
completed
Red
- active
Green
- future

Monthly Ocean Chlorophyll and NVDI from SeaWiFS

Upper Atmosphere

• Rainfall
Climatology
• TRMM
• TRMM Field
Experiments
• Aqua AIRS
Hurricane Mitch as seen by TRMM

February 28, 2002

Land Biosphere
• AVHRR Pathfinder

1999 Antarctic Ozone Hole as seen by TOMS

HDF-EOS Workshop V

• Heritage
BUV/SBUV
• Heritage LIMS
• Heritage TOMS
• UARS
• EP TOMS
• Aura HIRDLS
• Aura MLS
• Aura OMI
• SORCE

2
Primary Data Sets
GES DISC
DAAC

Data Set
AVHRR Pathfinder
CZCS
DAO
MODIS (Terra)
SeaWiFS
TOMS
TOVS Pathfinder
TRMM
UARS
DAS
AIRS
Aura
SORCE
February 28, 2002

Format

Temporal Coverage

HDF (subsets in binary)
Binary
Binary
HDF-EOS
HDF
HDF
HDF (subsets in binary)
HDF
Binary
HDF-EOS
HDF-EOS
HDF5-EOS
HDF5

Jul 1981 to Oct 2001
Oct 1978 to Jun 1986
Mar 1980 to Nov 1993
Dec 1999 to Present
Dec 1996 to Present
Nov 1978 to Present
Nov 1978 to Jul 1995
Dec 1997 to Present
Sep 1991 to Sep 2001
(soon)
Mar 2002 (launch)
Jul 2003 (launch)
Jul 2002 (launch)

HDF-EOS Workshop V

3
GES DISC
DAAC

HDF & HDF-EOS
Applications

Universal Data Reduction Server (UDRS)
Distributed Oceanographic Data System (DODS)
Web Mapping Testbed (WMT-DODS)/OpenGIS
Live Access Server (LAS)/Ferret
Gridded Analysis and Display System (GrADS-DODS)
Online data Analysis (OASIS)
read_hdf generic reader
other data set specific read software, including MODIS

February 28, 2002

HDF-EOS Workshop V

4
GES DISC
DAAC

Universal Data
Reduction Server

A virtual server consisting of:
DODS server
WMT-DODS server
GrADS-DODS server
LAS/Ferret
(others can be added)

Allows a variety of discipline, interdisciplinary and
applications users to access DAAC data
February 28, 2002

HDF-EOS Workshop V

5
GES DISC
DAAC

Distributed Oceanographic
Data Server
DODS developed by URI and UCAR
a protocol for requesting and transporting
data across the web
Transparently supports multiple formats
Subsetting performed at server end
Supports various servers (netCDF, HDF,
GrADS, MatLAB, FreeForm,…)
Supports various clients (IDL, MatLAB,
Ferret, LAS, GrADS, …)
Various DAAC data sets served by DODS
(see http://daac.gsfc.nasa.gov/DAAC_DOCS/DODS.html)

February 28, 2002

HDF-EOS Workshop V

6
GES DISC
DAAC

Web Mapping Testbed
WMT-DODS Server

OpenGIS consortium
Import HDF & HDF-EOS
data into GIS packages
Supports geolocated images
Interface to many DODS
servers
DAAC
external
(see http://daac.gsfc.nasa.gov/daac-bin/viewer/viewer.cgi)

February 28, 2002

HDF-EOS Workshop V

7
GrADS-DODS Server
GES DISC
DAAC

Developed by Center for Ocean-Land-Atmosphere Studies
(COLA)
Supports data analysis functions (statistical, smoothing,
correlation, …)
Subset data
Work on single or multiple files
Supports several data formats (HDF, netCDF, GRIB, binary, …)
Interfaces with DODS
DAAC Server to go operational later this year

February 28, 2002

HDF-EOS Workshop V

8
GES DISC
DAAC

Live Access Server/
Ferret

LAS developed by NOAA
Web GUI interface (Ferret)
Interfaces with DODS
Visualize data
Subset data
Save to various formats
Custom data set specific
templates added by DAAC
Support for MODIS and
SeaWiFS (coming soon)

February 28, 2002

HDF-EOS Workshop V

9
Atmospheric Dynamics
OASIS

GES DISC
DAAC

Web Interface
Uses JAVA applets
Perform data analysis
online
Intercomparison
Visualize data
Animations
Supports DAAC
atmospheric dynamics data
HDF & HDF-EOS support
coming soon

(see http://daac.gsfc.nasa.gov/CAMPAIGN_DOCS/atmospheric_dynamics/onl ine_analysis/OASIS/html /)

February 28, 2002

HDF-EOS Workshop V

10
read_hdf
GES DISC
DAAC

Interactive command line C program
Generic, supports any HDF file
Display hierarchical tree of useful objects (SDS,
Vdata, Vgroup, Raster Images, Annotations)
Subset data
Output to ASCII or binary
Also dump any obscure HDF object (DFTAG_NT,
DFTAG_VERSION, etc.)
February 28, 2002

HDF-EOS Workshop V

11
GES DISC
DAAC

Other DAAC
HDF Applications

MODIS readers and visualization (IDL based)
(see http://daac.gsfc.nasa.gov/CAMPAIGN_DOCS/MODIS/)

geoview
modis_atmos
simap
HDFLook-MODIS (collaboration between DAAC and the
Laboratoire d’Optique Atmosphérique, France)
SeaWiFS data best used with SeaWiFS’ SeaDAS package
TRMM data reader and IDL based TSDIS orbit viewer
Other DAAC data sets include C, Fortran and/or IDL readers
February 28, 2002

HDF-EOS Workshop V

12
HDF & HDF-EOS Issues
GES DISC
DAAC

Large file sizes (MODIS, AVHRR)
requires lots of bandwidth for downloading
end user needs lots of disk space
non-standard Grid projections

User frustration
reluctance to accept HDF (prefer ASCII, binary, other formats)
download and install libraries (two for HDF-EOS)
confusion - HDF, HDF-EOS, and now HDF5

Poor HDF layout/implementation (or not self documenting)
cryptic field and file names
no field level attributes or descriptions of file contents
too many fields
internal compression rarely utilized
February 28, 2002

HDF-EOS Workshop V

13

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HDF and HDF-EOS Experiences and Applications

  • 1. GES DISC DAAC The Goddard DAAC http://daac.gsfc.nasa.gov HDF and HDF-EOS Experiences and Applications Presented by: James Johnson, SSAI February 28, 2002 HDF-EOS Workshop V 1
  • 2. Science Disciplines GES DISC DAAC Atmospheric Dynamics Global Biosphere Ocean Color • CZCS • OCTS • SeaWiFS • Terra MODIS • Aqua MODIS • TOVS Pathfinder • Data Assimilation • Terra MODIS • Aqua AIRS • Aqua MODIS TOVS 1000 hPa Monthly Mean Specific Humidity Hydrology Black completed Red - active Green - future Monthly Ocean Chlorophyll and NVDI from SeaWiFS Upper Atmosphere • Rainfall Climatology • TRMM • TRMM Field Experiments • Aqua AIRS Hurricane Mitch as seen by TRMM February 28, 2002 Land Biosphere • AVHRR Pathfinder 1999 Antarctic Ozone Hole as seen by TOMS HDF-EOS Workshop V • Heritage BUV/SBUV • Heritage LIMS • Heritage TOMS • UARS • EP TOMS • Aura HIRDLS • Aura MLS • Aura OMI • SORCE 2
  • 3. Primary Data Sets GES DISC DAAC Data Set AVHRR Pathfinder CZCS DAO MODIS (Terra) SeaWiFS TOMS TOVS Pathfinder TRMM UARS DAS AIRS Aura SORCE February 28, 2002 Format Temporal Coverage HDF (subsets in binary) Binary Binary HDF-EOS HDF HDF HDF (subsets in binary) HDF Binary HDF-EOS HDF-EOS HDF5-EOS HDF5 Jul 1981 to Oct 2001 Oct 1978 to Jun 1986 Mar 1980 to Nov 1993 Dec 1999 to Present Dec 1996 to Present Nov 1978 to Present Nov 1978 to Jul 1995 Dec 1997 to Present Sep 1991 to Sep 2001 (soon) Mar 2002 (launch) Jul 2003 (launch) Jul 2002 (launch) HDF-EOS Workshop V 3
  • 4. GES DISC DAAC HDF & HDF-EOS Applications Universal Data Reduction Server (UDRS) Distributed Oceanographic Data System (DODS) Web Mapping Testbed (WMT-DODS)/OpenGIS Live Access Server (LAS)/Ferret Gridded Analysis and Display System (GrADS-DODS) Online data Analysis (OASIS) read_hdf generic reader other data set specific read software, including MODIS February 28, 2002 HDF-EOS Workshop V 4
  • 5. GES DISC DAAC Universal Data Reduction Server A virtual server consisting of: DODS server WMT-DODS server GrADS-DODS server LAS/Ferret (others can be added) Allows a variety of discipline, interdisciplinary and applications users to access DAAC data February 28, 2002 HDF-EOS Workshop V 5
  • 6. GES DISC DAAC Distributed Oceanographic Data Server DODS developed by URI and UCAR a protocol for requesting and transporting data across the web Transparently supports multiple formats Subsetting performed at server end Supports various servers (netCDF, HDF, GrADS, MatLAB, FreeForm,…) Supports various clients (IDL, MatLAB, Ferret, LAS, GrADS, …) Various DAAC data sets served by DODS (see http://daac.gsfc.nasa.gov/DAAC_DOCS/DODS.html) February 28, 2002 HDF-EOS Workshop V 6
  • 7. GES DISC DAAC Web Mapping Testbed WMT-DODS Server OpenGIS consortium Import HDF & HDF-EOS data into GIS packages Supports geolocated images Interface to many DODS servers DAAC external (see http://daac.gsfc.nasa.gov/daac-bin/viewer/viewer.cgi) February 28, 2002 HDF-EOS Workshop V 7
  • 8. GrADS-DODS Server GES DISC DAAC Developed by Center for Ocean-Land-Atmosphere Studies (COLA) Supports data analysis functions (statistical, smoothing, correlation, …) Subset data Work on single or multiple files Supports several data formats (HDF, netCDF, GRIB, binary, …) Interfaces with DODS DAAC Server to go operational later this year February 28, 2002 HDF-EOS Workshop V 8
  • 9. GES DISC DAAC Live Access Server/ Ferret LAS developed by NOAA Web GUI interface (Ferret) Interfaces with DODS Visualize data Subset data Save to various formats Custom data set specific templates added by DAAC Support for MODIS and SeaWiFS (coming soon) February 28, 2002 HDF-EOS Workshop V 9
  • 10. Atmospheric Dynamics OASIS GES DISC DAAC Web Interface Uses JAVA applets Perform data analysis online Intercomparison Visualize data Animations Supports DAAC atmospheric dynamics data HDF & HDF-EOS support coming soon (see http://daac.gsfc.nasa.gov/CAMPAIGN_DOCS/atmospheric_dynamics/onl ine_analysis/OASIS/html /) February 28, 2002 HDF-EOS Workshop V 10
  • 11. read_hdf GES DISC DAAC Interactive command line C program Generic, supports any HDF file Display hierarchical tree of useful objects (SDS, Vdata, Vgroup, Raster Images, Annotations) Subset data Output to ASCII or binary Also dump any obscure HDF object (DFTAG_NT, DFTAG_VERSION, etc.) February 28, 2002 HDF-EOS Workshop V 11
  • 12. GES DISC DAAC Other DAAC HDF Applications MODIS readers and visualization (IDL based) (see http://daac.gsfc.nasa.gov/CAMPAIGN_DOCS/MODIS/) geoview modis_atmos simap HDFLook-MODIS (collaboration between DAAC and the Laboratoire d’Optique Atmosphérique, France) SeaWiFS data best used with SeaWiFS’ SeaDAS package TRMM data reader and IDL based TSDIS orbit viewer Other DAAC data sets include C, Fortran and/or IDL readers February 28, 2002 HDF-EOS Workshop V 12
  • 13. HDF & HDF-EOS Issues GES DISC DAAC Large file sizes (MODIS, AVHRR) requires lots of bandwidth for downloading end user needs lots of disk space non-standard Grid projections User frustration reluctance to accept HDF (prefer ASCII, binary, other formats) download and install libraries (two for HDF-EOS) confusion - HDF, HDF-EOS, and now HDF5 Poor HDF layout/implementation (or not self documenting) cryptic field and file names no field level attributes or descriptions of file contents too many fields internal compression rarely utilized February 28, 2002 HDF-EOS Workshop V 13